RNA–Protein interactions for RNA: ENST00000446783.1

CHCHD3P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 3, humanhuman

BASIC

Gene CHCHD3P3, Length 640 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P3-201ENST00000446783 ANKRD30BQ9BXX2 1392 aa17.01■□□□□ 0.31
CHCHD3P3-201ENST00000446783 SPATA31E1Q6ZUB1 1445 aa17■□□□□ 0.31
CHCHD3P3-201ENST00000446783 UPF1Q92900 1129 aaKnown RBP eCLIP17■□□□□ 0.31
CHCHD3P3-201ENST00000446783 PPLO60437 1756 aa17■□□□□ 0.31
CHCHD3P3-201ENST00000446783 NUTM2FA1L443 756 aa16.98■□□□□ 0.31
CHCHD3P3-201ENST00000446783 RBM6P78332 1123 aaKnown RBP16.97■□□□□ 0.31
CHCHD3P3-201ENST00000446783 LRPPRCP42704 1394 aaKnown RBP16.97■□□□□ 0.31
CHCHD3P3-201ENST00000446783 ACIN1Q9UKV3 1341 aaKnown RBP16.96■□□□□ 0.31
CHCHD3P3-201ENST00000446783 FOXO3O43524 673 aa16.96■□□□□ 0.31
CHCHD3P3-201ENST00000446783 ABCC11Q96J66 1382 aa16.96■□□□□ 0.31
CHCHD3P3-201ENST00000446783 NPHP3Q7Z494 1330 aa16.96■□□□□ 0.3
CHCHD3P3-201ENST00000446783 XPCQ01831 940 aaPredicted RBP16.95■□□□□ 0.3
CHCHD3P3-201ENST00000446783 PLEKHH1Q9ULM0 1364 aa16.94■□□□□ 0.3
CHCHD3P3-201ENST00000446783 USP21Q9UK80 565 aa16.94■□□□□ 0.3
CHCHD3P3-201ENST00000446783 CDK12Q9NYV4 1490 aaPredicted RBP16.93■□□□□ 0.3
CHCHD3P3-201ENST00000446783 C14orf93Q9H972 538 aaKnown RBP16.93■□□□□ 0.3
CHCHD3P3-201ENST00000446783 TECPR2O15040 1411 aa16.93■□□□□ 0.3
CHCHD3P3-201ENST00000446783 CFAP70Q5T0N1 1121 aa16.92■□□□□ 0.3
CHCHD3P3-201ENST00000446783 PIK3C2GO75747 1445 aa16.92■□□□□ 0.3
CHCHD3P3-201ENST00000446783 LAMC1P11047 1609 aa16.92■□□□□ 0.3
CHCHD3P3-201ENST00000446783 YTHDC2Q9H6S0 1430 aaKnown RBP16.91■□□□□ 0.3
CHCHD3P3-201ENST00000446783 SIRT1Q96EB6 747 aa16.91■□□□□ 0.3
CHCHD3P3-201ENST00000446783 CDC42BPGQ6DT37 1551 aa16.9■□□□□ 0.3
CHCHD3P3-201ENST00000446783 FNBP4Q8N3X1 1017 aaPredicted RBP16.9■□□□□ 0.3
CHCHD3P3-201ENST00000446783 TRPC5Q9UL62 973 aaPredicted RBP16.9■□□□□ 0.3
CHCHD3P3-201ENST00000446783 DHX57Q6P158 1386 aaKnown RBP16.89■□□□□ 0.29
CHCHD3P3-201ENST00000446783 RAB3GAP2Q9H2M9 1393 aa16.89■□□□□ 0.29
CHCHD3P3-201ENST00000446783 RGS12O14924 1447 aa16.88■□□□□ 0.29
CHCHD3P3-201ENST00000446783 SAFB2Q14151 953 aaKnown RBP eCLIP16.87■□□□□ 0.29
CHCHD3P3-201ENST00000446783 KRT28Q7Z3Y7 464 aa16.87■□□□□ 0.29
CHCHD3P3-201ENST00000446783 PXDNQ92626 1479 aa16.86■□□□□ 0.29
CHCHD3P3-201ENST00000446783 IFT172Q9UG01 1749 aa16.86■□□□□ 0.29
CHCHD3P3-201ENST00000446783 PRAM1Q96QH2 718 aa16.85■□□□□ 0.29
CHCHD3P3-201ENST00000446783 POGKQ9P215 609 aa16.85■□□□□ 0.29
CHCHD3P3-201ENST00000446783 PHF8Q9UPP1 1060 aa16.85■□□□□ 0.29
CHCHD3P3-201ENST00000446783 SPATA31A3Q5VYP0 1347 aa16.85■□□□□ 0.29
CHCHD3P3-201ENST00000446783 MYOM2P54296 1465 aa16.85■□□□□ 0.29
CHCHD3P3-201ENST00000446783 NRXN1Q9ULB1 1477 aa16.83■□□□□ 0.28
CHCHD3P3-201ENST00000446783 KDM2AQ9Y2K7 1162 aa16.83■□□□□ 0.28
CHCHD3P3-201ENST00000446783 COL22A1Q8NFW1 1626 aaPredicted RBP16.82■□□□□ 0.28
CHCHD3P3-201ENST00000446783 ATRNO75882 1429 aa16.82■□□□□ 0.28
CHCHD3P3-201ENST00000446783 PSME1Q06323 249 aa16.82■□□□□ 0.28
CHCHD3P3-201ENST00000446783 PLEKHG5O94827 1062 aa16.81■□□□□ 0.28
CHCHD3P3-201ENST00000446783 TRAK1Q9UPV9 953 aa16.81■□□□□ 0.28
CHCHD3P3-201ENST00000446783 KNDC1Q76NI1 1749 aa16.81■□□□□ 0.28
CHCHD3P3-201ENST00000446783 BCL9LQ86UU0 1499 aa16.8■□□□□ 0.28
CHCHD3P3-201ENST00000446783 DCAF11Q8TEB1 546 aa16.8■□□□□ 0.28
CHCHD3P3-201ENST00000446783 GJD4Q96KN9 370 aaPredicted RBP16.8■□□□□ 0.28
CHCHD3P3-201ENST00000446783 ATAD2Q6PL18 1390 aa16.79■□□□□ 0.28
CHCHD3P3-201ENST00000446783 HAP1P54257 671 aaPredicted RBP16.79■□□□□ 0.28
CHCHD3P3-201ENST00000446783 LMOD2Q6P5Q4 547 aa16.79■□□□□ 0.28
CHCHD3P3-201ENST00000446783 PMFBP1Q8TBY8 1022 aa16.79■□□□□ 0.28
CHCHD3P3-201ENST00000446783 FMN2Q9NZ56 1722 aa16.79■□□□□ 0.28
CHCHD3P3-201ENST00000446783 UNC5CLQ8IV45 518 aa16.78■□□□□ 0.28
CHCHD3P3-201ENST00000446783 CABLES1Q8TDN4 633 aa16.78■□□□□ 0.28
CHCHD3P3-201ENST00000446783 HIRIP3Q9BW71 556 aaPredicted RBP16.77■□□□□ 0.28
CHCHD3P3-201ENST00000446783 MINK1Q8N4C8 1332 aaPredicted RBP16.76■□□□□ 0.27
CHCHD3P3-201ENST00000446783 HRCP23327 699 aa16.76■□□□□ 0.27
CHCHD3P3-201ENST00000446783 STAC3Q96MF2 364 aa16.75■□□□□ 0.27
CHCHD3P3-201ENST00000446783 SBNO1A3KN83 1393 aa16.75■□□□□ 0.27
CHCHD3P3-201ENST00000446783 KIF1AQ12756 1690 aa16.75■□□□□ 0.27
CHCHD3P3-201ENST00000446783 TNS3Q68CZ2 1445 aa16.74■□□□□ 0.27
CHCHD3P3-201ENST00000446783 DLC1Q96QB1 1528 aa16.74■□□□□ 0.27
CHCHD3P3-201ENST00000446783 SLIT2O94813 1529 aa16.72■□□□□ 0.27
CHCHD3P3-201ENST00000446783 ADGRB1O14514 1584 aa16.72■□□□□ 0.27
CHCHD3P3-201ENST00000446783 ANKARQ7Z5J8 1434 aa16.71■□□□□ 0.27
CHCHD3P3-201ENST00000446783 WASLO00401 505 aaPredicted RBP16.71■□□□□ 0.27
CHCHD3P3-201ENST00000446783 CCDC9Q9Y3X0 531 aaKnown RBP16.71■□□□□ 0.27
CHCHD3P3-201ENST00000446783 ARHGEF10O15013 1369 aa16.71■□□□□ 0.27
CHCHD3P3-201ENST00000446783 RGPD8O14715 1765 aaPredicted RBP16.71■□□□□ 0.27
CHCHD3P3-201ENST00000446783 FAM83GA6ND36 823 aa16.7■□□□□ 0.26
CHCHD3P3-201ENST00000446783 CCDC125Q86Z20 511 aa16.7■□□□□ 0.26
CHCHD3P3-201ENST00000446783 PRR36Q9H6K5 1346 aa16.7■□□□□ 0.26
CHCHD3P3-201ENST00000446783 RALGAPBQ86X10 1494 aa16.69■□□□□ 0.26
CHCHD3P3-201ENST00000446783 GPRASP1Q5JY77 1395 aa16.69■□□□□ 0.26
CHCHD3P3-201ENST00000446783 VPS72Q15906 364 aa16.69■□□□□ 0.26
CHCHD3P3-201ENST00000446783 MARF1Q9Y4F3 1742 aaKnown RBP16.69■□□□□ 0.26
CHCHD3P3-201ENST00000446783 EIF3AQ14152 1382 aaKnown RBP16.68■□□□□ 0.26
CHCHD3P3-201ENST00000446783 SEPT12Q8IYM1 358 aa16.68■□□□□ 0.26
CHCHD3P3-201ENST00000446783 NGDNQ8NEJ9 315 aaKnown RBP16.68■□□□□ 0.26
CHCHD3P3-201ENST00000446783 USP32Q8NFA0 1604 aa16.67■□□□□ 0.26
CHCHD3P3-201ENST00000446783 PAK3O75914 559 aaPredicted RBP16.66■□□□□ 0.26
CHCHD3P3-201ENST00000446783 ZRANB1Q9UGI0 708 aa16.66■□□□□ 0.26
CHCHD3P3-201ENST00000446783 ADGRB2O60241 1585 aa16.64■□□□□ 0.25
CHCHD3P3-201ENST00000446783 GLI3P10071 1580 aa16.64■□□□□ 0.25
CHCHD3P3-201ENST00000446783 ONECUT3O60422 494 aaPredicted RBP16.64■□□□□ 0.25
CHCHD3P3-201ENST00000446783 NUDT16Q96DE0 195 aaKnown RBP16.64■□□□□ 0.25
CHCHD3P3-201ENST00000446783 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.63■□□□□ 0.25
CHCHD3P3-201ENST00000446783 CDK19Q9BWU1 502 aa16.63■□□□□ 0.25
CHCHD3P3-201ENST00000446783 BTG4Q9NY30 223 aa16.63■□□□□ 0.25
CHCHD3P3-201ENST00000446783 TULP4Q9NRJ4 1543 aa16.63■□□□□ 0.25
CHCHD3P3-201ENST00000446783 A0A0G2JS52 829 aa16.62■□□□□ 0.25
CHCHD3P3-201ENST00000446783 MYT1Q01538 1121 aa16.62■□□□□ 0.25
CHCHD3P3-201ENST00000446783 KRT27Q7Z3Y8 459 aa16.61■□□□□ 0.25
CHCHD3P3-201ENST00000446783 SF3B2Q13435 895 aaKnown RBP16.6■□□□□ 0.25
CHCHD3P3-201ENST00000446783 FAM98CQ17RN3 349 aaKnown RBP16.6■□□□□ 0.25
CHCHD3P3-201ENST00000446783 NBPF1Q3BBV0 1214 aa16.6■□□□□ 0.25
CHCHD3P3-201ENST00000446783 BLMP54132 1417 aaPredicted RBP16.6■□□□□ 0.25
CHCHD3P3-201ENST00000446783 DEFB132Q7Z7B7 95 aa16.59■□□□□ 0.25
CHCHD3P3-201ENST00000446783 PRDM11Q9NQV5 511 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms