RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 ADAMTS13Q76LX8 1427 aa11.35□□□□□ -0.59
HDAC9-216ENST00000446646 NOS1P29475 1434 aa11.35□□□□□ -0.59
HDAC9-216ENST00000446646 PTPRUQ92729 1446 aa11.35□□□□□ -0.59
HDAC9-216ENST00000446646 NCOA3Q9Y6Q9 1424 aa11.35□□□□□ -0.59
HDAC9-216ENST00000446646 ZNF579Q8NAF0 562 aaKnown RBP11.34□□□□□ -0.59
HDAC9-216ENST00000446646 RTN4Q9NQC3 1192 aaKnown RBP11.34□□□□□ -0.59
HDAC9-216ENST00000446646 RRP7BPQ9NSQ0 103 aa11.34□□□□□ -0.59
HDAC9-216ENST00000446646 USP21Q9UK80 565 aa11.34□□□□□ -0.59
HDAC9-216ENST00000446646 MST1RQ04912 1400 aa11.34□□□□□ -0.59
HDAC9-216ENST00000446646 KIF15Q9NS87 1388 aa11.33□□□□□ -0.6
HDAC9-216ENST00000446646 TBX22Q9Y458 520 aa11.33□□□□□ -0.6
HDAC9-216ENST00000446646 DUOX2Q9NRD8 1548 aa11.33□□□□□ -0.6
HDAC9-216ENST00000446646 ATRNO75882 1429 aa11.33□□□□□ -0.6
HDAC9-216ENST00000446646 RIMS2Q9UQ26 1411 aa11.33□□□□□ -0.6
HDAC9-216ENST00000446646 PSDA5PKW4 1024 aaPredicted RBP11.32□□□□□ -0.6
HDAC9-216ENST00000446646 SLC24A1O60721 1099 aa11.32□□□□□ -0.6
HDAC9-216ENST00000446646 AMER1Q5JTC6 1135 aaPredicted RBP11.32□□□□□ -0.6
HDAC9-216ENST00000446646 LRRC59Q96AG4 307 aaKnown RBP11.32□□□□□ -0.6
HDAC9-216ENST00000446646 NHSL1Q5SYE7 1610 aa11.31□□□□□ -0.6
HDAC9-216ENST00000446646 PPP1R15AO75807 674 aaPredicted RBP11.31□□□□□ -0.6
HDAC9-216ENST00000446646 TRPC5Q9UL62 973 aaPredicted RBP11.31□□□□□ -0.6
HDAC9-216ENST00000446646 FNBP4Q8N3X1 1017 aaPredicted RBP11.3□□□□□ -0.6
HDAC9-216ENST00000446646 TSPYL2Q9H2G4 693 aaPredicted RBP11.3□□□□□ -0.6
HDAC9-216ENST00000446646 ZBTB47Q9UFB7 747 aaPredicted RBP11.3□□□□□ -0.6
HDAC9-216ENST00000446646 AMOTL2Q9Y2J4 779 aa11.3□□□□□ -0.6
HDAC9-216ENST00000446646 LRP5O75197 1615 aa11.3□□□□□ -0.6
HDAC9-216ENST00000446646 MYO5BQ9ULV0 1848 aa11.29□□□□□ -0.6
HDAC9-216ENST00000446646 LMTK2Q8IWU2 1503 aa11.29□□□□□ -0.6
HDAC9-216ENST00000446646 BCL9LQ86UU0 1499 aa11.28□□□□□ -0.6
HDAC9-216ENST00000446646 CLCN6P51797 869 aa11.28□□□□□ -0.6
HDAC9-216ENST00000446646 CCDC125Q86Z20 511 aa11.28□□□□□ -0.6
HDAC9-216ENST00000446646 PHF12Q96QT6 1004 aa11.28□□□□□ -0.6
HDAC9-216ENST00000446646 ERBINQ96RT1 1412 aa11.27□□□□□ -0.6
HDAC9-216ENST00000446646 HRCP23327 699 aa11.27□□□□□ -0.61
HDAC9-216ENST00000446646 SLC52A1Q9NWF4 448 aa11.27□□□□□ -0.61
HDAC9-216ENST00000446646 ABCC5O15440 1437 aa11.26□□□□□ -0.61
HDAC9-216ENST00000446646 CEP350Q5VT06 3117 aa11.26□□□□□ -0.61
HDAC9-216ENST00000446646 BLMP54132 1417 aaPredicted RBP11.26□□□□□ -0.61
HDAC9-216ENST00000446646 KANK1Q14678 1352 aa11.25□□□□□ -0.61
HDAC9-216ENST00000446646 DCCP43146 1447 aa11.25□□□□□ -0.61
HDAC9-216ENST00000446646 TRPM2O94759 1503 aa11.25□□□□□ -0.61
HDAC9-216ENST00000446646 TMEM131LA2VDJ0 1609 aa11.24□□□□□ -0.61
HDAC9-216ENST00000446646 CHGAP10645 457 aaKnown RBP11.24□□□□□ -0.61
HDAC9-216ENST00000446646 VASPP50552 380 aaPredicted RBP11.24□□□□□ -0.61
HDAC9-216ENST00000446646 KANK4Q5T7N3 995 aaPredicted RBP11.24□□□□□ -0.61
HDAC9-216ENST00000446646 GJD4Q96KN9 370 aaPredicted RBP11.23□□□□□ -0.61
HDAC9-216ENST00000446646 ORAI2Q96SN7 254 aa11.23□□□□□ -0.61
HDAC9-216ENST00000446646 CHIC2Q9UKJ5 165 aa11.23□□□□□ -0.61
HDAC9-216ENST00000446646 PIK3R4Q99570 1358 aa11.23□□□□□ -0.61
HDAC9-216ENST00000446646 GCC2Q8IWJ2 1684 aa11.23□□□□□ -0.61
HDAC9-216ENST00000446646 YY1P25490 414 aa11.22□□□□□ -0.61
HDAC9-216ENST00000446646 SOS2Q07890 1332 aaPredicted RBP11.22□□□□□ -0.61
HDAC9-216ENST00000446646 MYOM3Q5VTT5 1437 aa11.22□□□□□ -0.61
HDAC9-216ENST00000446646 RASEFQ8IZ41 740 aa11.22□□□□□ -0.61
HDAC9-216ENST00000446646 C1orf167Q5SNV9 1468 aa11.21□□□□□ -0.61
HDAC9-216ENST00000446646 PTCH1Q13635 1447 aa11.21□□□□□ -0.61
HDAC9-216ENST00000446646 METP08581 1390 aa11.21□□□□□ -0.61
HDAC9-216ENST00000446646 GLI3P10071 1580 aa11.2□□□□□ -0.62
HDAC9-216ENST00000446646 MYOM2P54296 1465 aa11.2□□□□□ -0.62
HDAC9-216ENST00000446646 RALGAPBQ86X10 1494 aa11.2□□□□□ -0.62
HDAC9-216ENST00000446646 GALR2O43603 387 aaPredicted RBP11.2□□□□□ -0.62
HDAC9-216ENST00000446646 XRN1Q8IZH2 1706 aaKnown RBP11.2□□□□□ -0.62
HDAC9-216ENST00000446646 ADGRL3Q9HAR2 1447 aa11.19□□□□□ -0.62
HDAC9-216ENST00000446646 NRXN3Q9Y4C0 1643 aa11.18□□□□□ -0.62
HDAC9-216ENST00000446646 R3HDM1Q15032 1099 aaKnown RBP11.18□□□□□ -0.62
HDAC9-216ENST00000446646 KLHL34Q8N239 644 aa11.18□□□□□ -0.62
HDAC9-216ENST00000446646 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.18□□□□□ -0.62
HDAC9-216ENST00000446646 DCBLD2Q96PD2 775 aa11.18□□□□□ -0.62
HDAC9-216ENST00000446646 CCDC61Q9Y6R9 512 aa11.18□□□□□ -0.62
HDAC9-216ENST00000446646 UNC13BO14795 1591 aa11.18□□□□□ -0.62
HDAC9-216ENST00000446646 BRWD3Q6RI45 1802 aa11.17□□□□□ -0.62
HDAC9-216ENST00000446646 HDGFP51858 240 aaKnown RBP11.17□□□□□ -0.62
HDAC9-216ENST00000446646 XPCQ01831 940 aaPredicted RBP11.17□□□□□ -0.62
HDAC9-216ENST00000446646 SEPT12Q8IYM1 358 aa11.17□□□□□ -0.62
HDAC9-216ENST00000446646 NALCNQ8IZF0 1738 aa11.17□□□□□ -0.62
HDAC9-216ENST00000446646 DAPK1P53355 1430 aa11.17□□□□□ -0.62
HDAC9-216ENST00000446646 NUBP1P53384 320 aa11.16□□□□□ -0.62
HDAC9-216ENST00000446646 CROCC2H7BZ55 1655 aa11.16□□□□□ -0.62
HDAC9-216ENST00000446646 LAMC1P11047 1609 aa11.16□□□□□ -0.62
HDAC9-216ENST00000446646 COL22A1Q8NFW1 1626 aaPredicted RBP11.15□□□□□ -0.62
HDAC9-216ENST00000446646 RPRD2Q5VT52 1461 aaKnown RBP11.14□□□□□ -0.63
HDAC9-216ENST00000446646 EN1Q05925 392 aaPredicted RBP11.14□□□□□ -0.63
HDAC9-216ENST00000446646 SF3B2Q13435 895 aaKnown RBP11.14□□□□□ -0.63
HDAC9-216ENST00000446646 IFFO2Q5TF58 517 aa11.14□□□□□ -0.63
HDAC9-216ENST00000446646 UNC5CLQ8IV45 518 aa11.14□□□□□ -0.63
HDAC9-216ENST00000446646 FAM212AQ96EL1 285 aa11.14□□□□□ -0.63
HDAC9-216ENST00000446646 POTEIP0CG38 1075 aa11.13□□□□□ -0.63
HDAC9-216ENST00000446646 MS4A3Q96HJ5 214 aa11.13□□□□□ -0.63
HDAC9-216ENST00000446646 SLIT2O94813 1529 aa11.13□□□□□ -0.63
HDAC9-216ENST00000446646 FAM182BQ5T319 152 aa11.12□□□□□ -0.63
HDAC9-216ENST00000446646 ROBO2Q9HCK4 1378 aa11.12□□□□□ -0.63
HDAC9-216ENST00000446646 PXDNQ92626 1479 aa11.12□□□□□ -0.63
HDAC9-216ENST00000446646 KRT27Q7Z3Y8 459 aa11.11□□□□□ -0.63
HDAC9-216ENST00000446646 ANKRD30AQ9BXX3 1397 aa11.11□□□□□ -0.63
HDAC9-216ENST00000446646 KIF12Q96FN5 646 aa11.1□□□□□ -0.63
HDAC9-216ENST00000446646 GOLGB1Q14789 3259 aaKnown RBP11.1□□□□□ -0.63
HDAC9-216ENST00000446646 PTPN23Q9H3S7 1636 aa11.09□□□□□ -0.63
HDAC9-216ENST00000446646 BAG6P46379 1132 aa11.09□□□□□ -0.63
HDAC9-216ENST00000446646 FOXO3O43524 673 aa11.08□□□□□ -0.64
HDAC9-216ENST00000446646 ONECUT3O60422 494 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms