RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 POLR3AO14802 1390 aaPredicted RBP18.12■□□□□ 0.49
ERCC3-203ENST00000445889 NOS1P29475 1434 aa18.12■□□□□ 0.49
ERCC3-203ENST00000445889 TBC1D32Q96NH3 1257 aa18.12■□□□□ 0.49
ERCC3-203ENST00000445889 STAC3Q96MF2 364 aa18.11■□□□□ 0.49
ERCC3-203ENST00000445889 ANTXR1Q9H6X2 564 aa18.11■□□□□ 0.49
ERCC3-203ENST00000445889 STK26Q9P289 416 aa18.11■□□□□ 0.49
ERCC3-203ENST00000445889 RWDD1Q9H446 243 aaPredicted RBP18.11■□□□□ 0.49
ERCC3-203ENST00000445889 EXOSC9Q06265 439 aaKnown RBP18.1■□□□□ 0.49
ERCC3-203ENST00000445889 SMC4Q9NTJ3 1288 aa18.1■□□□□ 0.49
ERCC3-203ENST00000445889 ABCC1P33527 1531 aa18.1■□□□□ 0.49
ERCC3-203ENST00000445889 ITPRIPQ8IWB1 547 aa18.1■□□□□ 0.49
ERCC3-203ENST00000445889 GGNBP2Q9H3C7 697 aa18.09■□□□□ 0.49
ERCC3-203ENST00000445889 MVPQ14764 893 aaKnown RBP18.08■□□□□ 0.49
ERCC3-203ENST00000445889 CFAP53Q96M91 514 aa18.08■□□□□ 0.49
ERCC3-203ENST00000445889 DZIP1LQ8IYY4 767 aaKnown RBP18.08■□□□□ 0.48
ERCC3-203ENST00000445889 KDM5AP29375 1690 aaKnown RBP18.07■□□□□ 0.48
ERCC3-203ENST00000445889 FBLN1P23142 703 aa18.07■□□□□ 0.48
ERCC3-203ENST00000445889 WDR63Q8IWG1 891 aa18.07■□□□□ 0.48
ERCC3-203ENST00000445889 ZKSCAN2Q63HK3 967 aa18.07■□□□□ 0.48
ERCC3-203ENST00000445889 SPHKAPQ2M3C7 1700 aa18.06■□□□□ 0.48
ERCC3-203ENST00000445889 NLRP1Q9C000 1473 aa18.06■□□□□ 0.48
ERCC3-203ENST00000445889 CHD1O14646 1710 aa18.06■□□□□ 0.48
ERCC3-203ENST00000445889 TRIM27P14373 513 aa18.06■□□□□ 0.48
ERCC3-203ENST00000445889 SSH1Q8WYL5 1049 aa18.06■□□□□ 0.48
ERCC3-203ENST00000445889 PANK2Q9BZ23 570 aa18.06■□□□□ 0.48
ERCC3-203ENST00000445889 FAM43AQ8N2R8 423 aa18.05■□□□□ 0.48
ERCC3-203ENST00000445889 NGEFQ8N5V2 710 aa18.05■□□□□ 0.48
ERCC3-203ENST00000445889 PHF23Q9BUL5 403 aaPredicted RBP18.05■□□□□ 0.48
ERCC3-203ENST00000445889 C22orf23Q9BZE7 217 aa18.05■□□□□ 0.48
ERCC3-203ENST00000445889 MYH16Q9H6N6 1097 aa18.05■□□□□ 0.48
ERCC3-203ENST00000445889 RRAGDQ9NQL2 400 aaPredicted RBP18.05■□□□□ 0.48
ERCC3-203ENST00000445889 ZFYVE16Q7Z3T8 1539 aa18.04■□□□□ 0.48
ERCC3-203ENST00000445889 NOB1Q9ULX3 412 aaKnown RBP18.04■□□□□ 0.48
ERCC3-203ENST00000445889 CFAP65Q6ZU64 1925 aaKnown RBP18.04■□□□□ 0.48
ERCC3-203ENST00000445889 C14orf93Q9H972 538 aaKnown RBP18.03■□□□□ 0.48
ERCC3-203ENST00000445889 CEP152O94986 1710 aa18.03■□□□□ 0.48
ERCC3-203ENST00000445889 SLC24A1O60721 1099 aa18.02■□□□□ 0.48
ERCC3-203ENST00000445889 ABCA6Q8N139 1617 aa18.02■□□□□ 0.48
ERCC3-203ENST00000445889 FANCAO15360 1455 aa18.02■□□□□ 0.48
ERCC3-203ENST00000445889 FOXD4L1Q9NU39 408 aa18.02■□□□□ 0.48
ERCC3-203ENST00000445889 ZCCHC11Q5TAX3 1644 aaKnown RBP18.02■□□□□ 0.47
ERCC3-203ENST00000445889 SRPK2P78362 688 aaKnown RBP18.02■□□□□ 0.47
ERCC3-203ENST00000445889 LNPKQ9C0E8 428 aa18.02■□□□□ 0.47
ERCC3-203ENST00000445889 NINLQ9Y2I6 1382 aa18.02■□□□□ 0.47
ERCC3-203ENST00000445889 TMEM57Q8N5G2 664 aa18.01■□□□□ 0.47
ERCC3-203ENST00000445889 RTEL1-TNFRSF6BF6WH68 1400 aa18.01■□□□□ 0.47
ERCC3-203ENST00000445889 XRCC6P12956 609 aaKnown RBP eCLIP18.01■□□□□ 0.47
ERCC3-203ENST00000445889 MCM4P33991 863 aa17.99■□□□□ 0.47
ERCC3-203ENST00000445889 TMPOP42166 694 aaKnown RBP17.99■□□□□ 0.47
ERCC3-203ENST00000445889 TRIM35Q9UPQ4 493 aa17.99■□□□□ 0.47
ERCC3-203ENST00000445889 VIRMAQ69YN4 1812 aaKnown RBP17.99■□□□□ 0.47
ERCC3-203ENST00000445889 MAP3K4Q9Y6R4 1608 aa17.99■□□□□ 0.47
ERCC3-203ENST00000445889 ELL2O00472 640 aaPredicted RBP17.99■□□□□ 0.47
ERCC3-203ENST00000445889 C1orf115Q9H7X2 142 aa17.99■□□□□ 0.47
ERCC3-203ENST00000445889 RIPK4P57078 832 aa17.98■□□□□ 0.47
ERCC3-203ENST00000445889 ATP7AQ04656 1500 aa17.97■□□□□ 0.47
ERCC3-203ENST00000445889 ADGRL1O94910 1474 aa17.97■□□□□ 0.47
ERCC3-203ENST00000445889 L1TD1Q5T7N2 865 aaKnown RBP17.97■□□□□ 0.47
ERCC3-203ENST00000445889 ATF7IPQ6VMQ6 1270 aa17.97■□□□□ 0.47
ERCC3-203ENST00000445889 THUMPD2Q9BTF0 503 aaKnown RBP17.97■□□□□ 0.47
ERCC3-203ENST00000445889 MINK1Q8N4C8 1332 aaPredicted RBP17.97■□□□□ 0.47
ERCC3-203ENST00000445889 CCDC27Q2M243 656 aa17.96■□□□□ 0.47
ERCC3-203ENST00000445889 ZNF518AQ6AHZ1 1483 aa17.96■□□□□ 0.47
ERCC3-203ENST00000445889 GOLGA6L3A6NEY3 463 aa17.95■□□□□ 0.46
ERCC3-203ENST00000445889 TRAK2O60296 914 aa17.95■□□□□ 0.46
ERCC3-203ENST00000445889 EVC2Q86UK5 1308 aa17.95■□□□□ 0.46
ERCC3-203ENST00000445889 RSPH6AQ9H0K4 717 aa17.95■□□□□ 0.46
ERCC3-203ENST00000445889 TET3O43151 1660 aa17.94■□□□□ 0.46
ERCC3-203ENST00000445889 IQSEC2Q5JU85 1478 aa17.94■□□□□ 0.46
ERCC3-203ENST00000445889 PLEKHF1Q96S99 279 aa17.94■□□□□ 0.46
ERCC3-203ENST00000445889 MYOM2P54296 1465 aa17.93■□□□□ 0.46
ERCC3-203ENST00000445889 SHPRHQ149N8 1683 aa17.93■□□□□ 0.46
ERCC3-203ENST00000445889 DDX19BQ9UMR2 479 aa17.92■□□□□ 0.46
ERCC3-203ENST00000445889 SHROOM2Q13796 1616 aa17.92■□□□□ 0.46
ERCC3-203ENST00000445889 CD109Q6YHK3 1445 aa17.92■□□□□ 0.46
ERCC3-203ENST00000445889 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.92■□□□□ 0.46
ERCC3-203ENST00000445889 CHMP5Q9NZZ3 219 aa17.92■□□□□ 0.46
ERCC3-203ENST00000445889 HSCBQ8IWL3 235 aa17.92■□□□□ 0.46
ERCC3-203ENST00000445889 SBNO2Q9Y2G9 1366 aa17.91■□□□□ 0.46
ERCC3-203ENST00000445889 AAMPQ13685 434 aa17.91■□□□□ 0.46
ERCC3-203ENST00000445889 FYB1O15117 783 aa17.91■□□□□ 0.46
ERCC3-203ENST00000445889 HMOX1P09601 288 aa17.91■□□□□ 0.46
ERCC3-203ENST00000445889 RBM42Q9BTD8 480 aaKnown RBP17.91■□□□□ 0.46
ERCC3-203ENST00000445889 NPATQ14207 1427 aa17.91■□□□□ 0.46
ERCC3-203ENST00000445889 MROH2AA6NES4 1674 aa17.9■□□□□ 0.46
ERCC3-203ENST00000445889 RAPGEF3O95398 923 aa17.9■□□□□ 0.46
ERCC3-203ENST00000445889 ANKRD45Q5TZF3 282 aa17.9■□□□□ 0.46
ERCC3-203ENST00000445889 ZBTB40Q9NUA8 1239 aa17.9■□□□□ 0.46
ERCC3-203ENST00000445889 A0A1W2PP64 1363 aa17.89■□□□□ 0.45
ERCC3-203ENST00000445889 HDAC1Q13547 482 aaPredicted RBP17.89■□□□□ 0.45
ERCC3-203ENST00000445889 CD2BP2O95400 341 aaKnown RBP17.88■□□□□ 0.45
ERCC3-203ENST00000445889 SMC5Q8IY18 1101 aa17.88■□□□□ 0.45
ERCC3-203ENST00000445889 ANKRD36BQ8N2N9 1353 aa17.87■□□□□ 0.45
ERCC3-203ENST00000445889 IDI1Q13907 227 aa17.87■□□□□ 0.45
ERCC3-203ENST00000445889 PRAM1Q96QH2 718 aa17.87■□□□□ 0.45
ERCC3-203ENST00000445889 DEPDC5O75140 1603 aa17.87■□□□□ 0.45
ERCC3-203ENST00000445889 MROH1Q8NDA8 1641 aa17.87■□□□□ 0.45
ERCC3-203ENST00000445889 VWDEQ8N2E2 1590 aa17.87■□□□□ 0.45
ERCC3-203ENST00000445889 TSPYL6Q8N831 410 aa17.87■□□□□ 0.45
ERCC3-203ENST00000445889 KIAA1210Q9ULL0 1709 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms