RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 PRAG1Q86YV5 1406 aa21.38■■□□□ 1.01
SHANK2-209ENST00000445654 SF3B2Q13435 895 aaKnown RBP21.38■■□□□ 1.01
SHANK2-209ENST00000445654 BCL9LQ86UU0 1499 aa21.38■■□□□ 1.01
SHANK2-209ENST00000445654 HFM1A2PYH4 1435 aa21.38■■□□□ 1.01
SHANK2-209ENST00000445654 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.37■■□□□ 1.01
SHANK2-209ENST00000445654 LRPPRCP42704 1394 aaKnown RBP21.36■■□□□ 1.01
SHANK2-209ENST00000445654 VGFO15240 615 aaPredicted RBP21.35■■□□□ 1.01
SHANK2-209ENST00000445654 KIF1BO60333 1816 aa21.34■■□□□ 1.01
SHANK2-209ENST00000445654 LRP5O75197 1615 aa21.34■■□□□ 1.01
SHANK2-209ENST00000445654 ROBO2Q9HCK4 1378 aa21.32■■□□□ 1
SHANK2-209ENST00000445654 ESCO1Q5FWF5 840 aa21.31■■□□□ 1
SHANK2-209ENST00000445654 UNC5CLQ8IV45 518 aa21.31■■□□□ 1
SHANK2-209ENST00000445654 CDC42BPGQ6DT37 1551 aa21.31■■□□□ 1
SHANK2-209ENST00000445654 PXDNQ92626 1479 aa21.3■■□□□ 1
SHANK2-209ENST00000445654 CLTCL1P53675 1640 aa21.29■■□□□ 1
SHANK2-209ENST00000445654 RALGAPBQ86X10 1494 aa21.28■■□□□ 1
SHANK2-209ENST00000445654 RPGRIP1LQ68CZ1 1315 aa21.28■■□□□ 1
SHANK2-209ENST00000445654 SLIT2O94813 1529 aa21.26■□□□□ 0.99
SHANK2-209ENST00000445654 GLI3P10071 1580 aa21.26■□□□□ 0.99
SHANK2-209ENST00000445654 FOXO3O43524 673 aa21.23■□□□□ 0.99
SHANK2-209ENST00000445654 DEFB132Q7Z7B7 95 aa21.23■□□□□ 0.99
SHANK2-209ENST00000445654 BRWD3Q6RI45 1802 aa21.21■□□□□ 0.99
SHANK2-209ENST00000445654 CCDC144AA2RUR9 1427 aa21.21■□□□□ 0.99
SHANK2-209ENST00000445654 USP32Q8NFA0 1604 aa21.2■□□□□ 0.98
SHANK2-209ENST00000445654 BAG6P46379 1132 aa21.2■□□□□ 0.98
SHANK2-209ENST00000445654 SEPT12Q8IYM1 358 aa21.2■□□□□ 0.98
SHANK2-209ENST00000445654 KIF1AQ12756 1690 aa21.2■□□□□ 0.98
SHANK2-209ENST00000445654 ITGAEP38570 1179 aa21.19■□□□□ 0.98
SHANK2-209ENST00000445654 HAP1P54257 671 aaPredicted RBP21.19■□□□□ 0.98
SHANK2-209ENST00000445654 VPS72Q15906 364 aa21.19■□□□□ 0.98
SHANK2-209ENST00000445654 SPATA31A3Q5VYP0 1347 aa21.19■□□□□ 0.98
SHANK2-209ENST00000445654 XPCQ01831 940 aaPredicted RBP21.18■□□□□ 0.98
SHANK2-209ENST00000445654 NAIPQ13075 1403 aa21.18■□□□□ 0.98
SHANK2-209ENST00000445654 KRT27Q7Z3Y8 459 aa21.17■□□□□ 0.98
SHANK2-209ENST00000445654 NWD2Q9ULI1 1742 aa21.17■□□□□ 0.98
SHANK2-209ENST00000445654 ONECUT3O60422 494 aaPredicted RBP21.16■□□□□ 0.98
SHANK2-209ENST00000445654 CCDC9Q9Y3X0 531 aaKnown RBP21.15■□□□□ 0.98
SHANK2-209ENST00000445654 PPLO60437 1756 aa21.15■□□□□ 0.98
SHANK2-209ENST00000445654 HRCP23327 699 aa21.14■□□□□ 0.97
SHANK2-209ENST00000445654 TECPR2O15040 1411 aa21.13■□□□□ 0.97
SHANK2-209ENST00000445654 PSME1Q06323 249 aa21.13■□□□□ 0.97
SHANK2-209ENST00000445654 KRT28Q7Z3Y7 464 aa21.12■□□□□ 0.97
SHANK2-209ENST00000445654 PLCH1Q4KWH8 1693 aa21.11■□□□□ 0.97
SHANK2-209ENST00000445654 TNS3Q68CZ2 1445 aa21.11■□□□□ 0.97
SHANK2-209ENST00000445654 FMN2Q9NZ56 1722 aa21.1■□□□□ 0.97
SHANK2-209ENST00000445654 A0A0G2JS52 829 aa21.09■□□□□ 0.97
SHANK2-209ENST00000445654 NUTM2FA1L443 756 aa21.09■□□□□ 0.97
SHANK2-209ENST00000445654 PSDA5PKW4 1024 aaPredicted RBP21.09■□□□□ 0.97
SHANK2-209ENST00000445654 MYT1Q01538 1121 aa21.09■□□□□ 0.97
SHANK2-209ENST00000445654 KNDC1Q76NI1 1749 aa21.09■□□□□ 0.97
SHANK2-209ENST00000445654 ARHGEF10O15013 1369 aa21.08■□□□□ 0.96
SHANK2-209ENST00000445654 ABCC11Q96J66 1382 aa21.08■□□□□ 0.96
SHANK2-209ENST00000445654 RGPD1P0DJD0 1748 aa21.07■□□□□ 0.96
SHANK2-209ENST00000445654 SBNO1A3KN83 1393 aa21.06■□□□□ 0.96
SHANK2-209ENST00000445654 WAPLQ7Z5K2 1190 aa21.05■□□□□ 0.96
SHANK2-209ENST00000445654 STK26Q9P289 416 aa21.05■□□□□ 0.96
SHANK2-209ENST00000445654 RRBP1Q9P2E9 1410 aaKnown RBP21.04■□□□□ 0.96
SHANK2-209ENST00000445654 PHF8Q9UPP1 1060 aa21.03■□□□□ 0.96
SHANK2-209ENST00000445654 ANKRD30BQ9BXX2 1392 aa21.02■□□□□ 0.96
SHANK2-209ENST00000445654 SIRT1Q96EB6 747 aa21.02■□□□□ 0.96
SHANK2-209ENST00000445654 DISP2A7MBM2 1401 aa21.02■□□□□ 0.96
SHANK2-209ENST00000445654 ABCA3Q99758 1704 aa21.01■□□□□ 0.95
SHANK2-209ENST00000445654 SLC4A1APQ9BWU0 796 aaKnown RBP21.01■□□□□ 0.95
SHANK2-209ENST00000445654 LMOD2Q6P5Q4 547 aa21■□□□□ 0.95
SHANK2-209ENST00000445654 IFT172Q9UG01 1749 aa20.99■□□□□ 0.95
SHANK2-209ENST00000445654 EN1Q05925 392 aaPredicted RBP20.99■□□□□ 0.95
SHANK2-209ENST00000445654 R3HDM1Q15032 1099 aaKnown RBP20.99■□□□□ 0.95
SHANK2-209ENST00000445654 FAM98CQ17RN3 349 aaKnown RBP20.99■□□□□ 0.95
SHANK2-209ENST00000445654 CABLES1Q8TDN4 633 aa20.99■□□□□ 0.95
SHANK2-209ENST00000445654 NRXN1Q9ULB1 1477 aa20.99■□□□□ 0.95
SHANK2-209ENST00000445654 ADGRF5Q8IZF2 1346 aa20.99■□□□□ 0.95
SHANK2-209ENST00000445654 ADGRB2O60241 1585 aa20.98■□□□□ 0.95
SHANK2-209ENST00000445654 NRAPQ86VF7 1730 aa20.97■□□□□ 0.95
SHANK2-209ENST00000445654 PLEKHH1Q9ULM0 1364 aa20.97■□□□□ 0.95
SHANK2-209ENST00000445654 YTHDC2Q9H6S0 1430 aaKnown RBP20.96■□□□□ 0.95
SHANK2-209ENST00000445654 COL14A1Q05707 1796 aaKnown RBP20.96■□□□□ 0.95
SHANK2-209ENST00000445654 FAM83GA6ND36 823 aa20.96■□□□□ 0.95
SHANK2-209ENST00000445654 PARD3Q8TEW0 1356 aa20.96■□□□□ 0.95
SHANK2-209ENST00000445654 DCAF8L1A6NGE4 600 aa20.94■□□□□ 0.94
SHANK2-209ENST00000445654 YY1P25490 414 aa20.94■□□□□ 0.94
SHANK2-209ENST00000445654 BTG4Q9NY30 223 aa20.94■□□□□ 0.94
SHANK2-209ENST00000445654 RGPD8O14715 1765 aaPredicted RBP20.94■□□□□ 0.94
SHANK2-209ENST00000445654 PLEKHG5O94827 1062 aa20.93■□□□□ 0.94
SHANK2-209ENST00000445654 TMEM132EQ6IEE7 984 aa20.93■□□□□ 0.94
SHANK2-209ENST00000445654 PIK3C2GO75747 1445 aa20.93■□□□□ 0.94
SHANK2-209ENST00000445654 TNS1Q9HBL0 1735 aaKnown RBP20.92■□□□□ 0.94
SHANK2-209ENST00000445654 ANKARQ7Z5J8 1434 aa20.92■□□□□ 0.94
SHANK2-209ENST00000445654 SPATA31A5Q5VU36 1347 aa20.91■□□□□ 0.94
SHANK2-209ENST00000445654 SPATA31A7Q8IWB4 1347 aa20.91■□□□□ 0.94
SHANK2-209ENST00000445654 DHX57Q6P158 1386 aaKnown RBP20.9■□□□□ 0.94
SHANK2-209ENST00000445654 RGL3Q3MIN7 710 aa20.9■□□□□ 0.94
SHANK2-209ENST00000445654 SPATA31E1Q6ZUB1 1445 aa20.89■□□□□ 0.94
SHANK2-209ENST00000445654 GPRASP1Q5JY77 1395 aa20.89■□□□□ 0.93
SHANK2-209ENST00000445654 FAM196AQ6ZSG2 479 aa20.89■□□□□ 0.93
SHANK2-209ENST00000445654 THSD7AQ9UPZ6 1657 aa20.89■□□□□ 0.93
SHANK2-209ENST00000445654 EZH2Q15910 746 aaKnown RBP20.88■□□□□ 0.93
SHANK2-209ENST00000445654 EIF3AQ14152 1382 aaKnown RBP20.87■□□□□ 0.93
SHANK2-209ENST00000445654 NBPF8Q3BBV2 869 aa20.86■□□□□ 0.93
SHANK2-209ENST00000445654 NBPF14Q5TI25 921 aa20.86■□□□□ 0.93
SHANK2-209ENST00000445654 CAMKK2Q96RR4 588 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms