RNA–Protein interactions for RNA: ENST00000445563.2

CHMP1AP1-201, Transcript of charged multivesicular body protein 1A pseudogene 1, humanhuman

BASIC

Gene CHMP1AP1, Length 662 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AP1-201ENST00000445563 NALCNQ8IZF0 1738 aa21.38■■□□□ 1.01
CHMP1AP1-201ENST00000445563 PRAM1Q96QH2 718 aa21.37■■□□□ 1.01
CHMP1AP1-201ENST00000445563 MST1RQ04912 1400 aa21.35■■□□□ 1.01
CHMP1AP1-201ENST00000445563 TRPM1Q7Z4N2 1603 aa21.34■■□□□ 1.01
CHMP1AP1-201ENST00000445563 SCAF1Q9H7N4 1312 aaKnown RBP21.33■■□□□ 1.01
CHMP1AP1-201ENST00000445563 GPRASP1Q5JY77 1395 aa21.33■■□□□ 1
CHMP1AP1-201ENST00000445563 POGKQ9P215 609 aa21.31■■□□□ 1
CHMP1AP1-201ENST00000445563 CDC42BPGQ6DT37 1551 aa21.31■■□□□ 1
CHMP1AP1-201ENST00000445563 HSPA1LP34931 641 aa21.29■■□□□ 1
CHMP1AP1-201ENST00000445563 SAFB2Q14151 953 aaKnown RBP eCLIP21.29■■□□□ 1
CHMP1AP1-201ENST00000445563 C1orf167Q5SNV9 1468 aa21.28■■□□□ 1
CHMP1AP1-201ENST00000445563 RALGAPBQ86X10 1494 aa21.28■■□□□ 1
CHMP1AP1-201ENST00000445563 ROCK2O75116 1388 aaKnown RBP21.28■■□□□ 1
CHMP1AP1-201ENST00000445563 BRINP3Q76B58 766 aa21.28■■□□□ 1
CHMP1AP1-201ENST00000445563 ARHGEF28Q8N1W1 1705 aaKnown RBP21.27■■□□□ 1
CHMP1AP1-201ENST00000445563 ROBO1Q9Y6N7 1651 aa21.27■■□□□ 1
CHMP1AP1-201ENST00000445563 ADGRB2O60241 1585 aa21.24■□□□□ 0.99
CHMP1AP1-201ENST00000445563 MINK1Q8N4C8 1332 aaPredicted RBP21.23■□□□□ 0.99
CHMP1AP1-201ENST00000445563 ORAI2Q96SN7 254 aa21.22■□□□□ 0.99
CHMP1AP1-201ENST00000445563 HIRIP3Q9BW71 556 aaPredicted RBP21.22■□□□□ 0.99
CHMP1AP1-201ENST00000445563 CENPJQ9HC77 1338 aaPredicted RBP21.22■□□□□ 0.99
CHMP1AP1-201ENST00000445563 WASLO00401 505 aaPredicted RBP21.21■□□□□ 0.99
CHMP1AP1-201ENST00000445563 CARD11Q9BXL7 1154 aa21.21■□□□□ 0.99
CHMP1AP1-201ENST00000445563 FMN2Q9NZ56 1722 aa21.21■□□□□ 0.99
CHMP1AP1-201ENST00000445563 AHDC1Q5TGY3 1603 aaPredicted RBP21.18■□□□□ 0.98
CHMP1AP1-201ENST00000445563 NUTM2FA1L443 756 aa21.18■□□□□ 0.98
CHMP1AP1-201ENST00000445563 ANKARQ7Z5J8 1434 aa21.17■□□□□ 0.98
CHMP1AP1-201ENST00000445563 PRR36Q9H6K5 1346 aa21.16■□□□□ 0.98
CHMP1AP1-201ENST00000445563 ESCO1Q5FWF5 840 aa21.16■□□□□ 0.98
CHMP1AP1-201ENST00000445563 CDK19Q9BWU1 502 aa21.15■□□□□ 0.98
CHMP1AP1-201ENST00000445563 EIF3AQ14152 1382 aaKnown RBP21.14■□□□□ 0.98
CHMP1AP1-201ENST00000445563 DDX17Q92841 729 aaKnown RBP21.14■□□□□ 0.97
CHMP1AP1-201ENST00000445563 USP32Q8NFA0 1604 aa21.14■□□□□ 0.97
CHMP1AP1-201ENST00000445563 TULP4Q9NRJ4 1543 aa21.14■□□□□ 0.97
CHMP1AP1-201ENST00000445563 COL16A1Q07092 1604 aaPredicted RBP21.13■□□□□ 0.97
CHMP1AP1-201ENST00000445563 NHSL1Q5SYE7 1610 aa21.13■□□□□ 0.97
CHMP1AP1-201ENST00000445563 SBNO2Q9Y2G9 1366 aa21.11■□□□□ 0.97
CHMP1AP1-201ENST00000445563 SOS2Q07890 1332 aaPredicted RBP21.11■□□□□ 0.97
CHMP1AP1-201ENST00000445563 PHLPP1O60346 1717 aa21.11■□□□□ 0.97
CHMP1AP1-201ENST00000445563 QRICH2Q9H0J4 1663 aa21.1■□□□□ 0.97
CHMP1AP1-201ENST00000445563 NUDT16Q96DE0 195 aaKnown RBP21.1■□□□□ 0.97
CHMP1AP1-201ENST00000445563 PHF8Q9UPP1 1060 aa21.1■□□□□ 0.97
CHMP1AP1-201ENST00000445563 ATP7BP35670 1465 aa21.09■□□□□ 0.97
CHMP1AP1-201ENST00000445563 FOXO3O43524 673 aa21.09■□□□□ 0.97
CHMP1AP1-201ENST00000445563 NPHP3Q7Z494 1330 aa21.08■□□□□ 0.97
CHMP1AP1-201ENST00000445563 PXDNQ92626 1479 aa21.07■□□□□ 0.96
CHMP1AP1-201ENST00000445563 EVC2Q86UK5 1308 aa21.06■□□□□ 0.96
CHMP1AP1-201ENST00000445563 ST20-MTHFSA0A0A6YYL1 179 aa21.06■□□□□ 0.96
CHMP1AP1-201ENST00000445563 LRRC59Q96AG4 307 aaKnown RBP21.06■□□□□ 0.96
CHMP1AP1-201ENST00000445563 TESK2Q96S53 571 aa21.06■□□□□ 0.96
CHMP1AP1-201ENST00000445563 JCADQ9P266 1359 aa21.06■□□□□ 0.96
CHMP1AP1-201ENST00000445563 KIF1AQ12756 1690 aa21.05■□□□□ 0.96
CHMP1AP1-201ENST00000445563 RGPD8O14715 1765 aaPredicted RBP21.05■□□□□ 0.96
CHMP1AP1-201ENST00000445563 CABP2Q9NPB3 220 aa21.05■□□□□ 0.96
CHMP1AP1-201ENST00000445563 CCDC61Q9Y6R9 512 aa21.05■□□□□ 0.96
CHMP1AP1-201ENST00000445563 PLEKHG3A1L390 1219 aa21.04■□□□□ 0.96
CHMP1AP1-201ENST00000445563 PMFBP1Q8TBY8 1022 aa21.04■□□□□ 0.96
CHMP1AP1-201ENST00000445563 USP47Q96K76 1375 aa21.04■□□□□ 0.96
CHMP1AP1-201ENST00000445563 SRPK2P78362 688 aaKnown RBP21.03■□□□□ 0.96
CHMP1AP1-201ENST00000445563 KRT28Q7Z3Y7 464 aa21.02■□□□□ 0.96
CHMP1AP1-201ENST00000445563 XPCQ01831 940 aaPredicted RBP21.01■□□□□ 0.95
CHMP1AP1-201ENST00000445563 TOPAZ1Q8N9V7 1692 aa20.99■□□□□ 0.95
CHMP1AP1-201ENST00000445563 POLR3AO14802 1390 aaPredicted RBP20.99■□□□□ 0.95
CHMP1AP1-201ENST00000445563 PNPLA6Q8IY17 1366 aa20.99■□□□□ 0.95
CHMP1AP1-201ENST00000445563 PUS7Q96PZ0 661 aaKnown RBP20.99■□□□□ 0.95
CHMP1AP1-201ENST00000445563 SLC24A1O60721 1099 aa20.98■□□□□ 0.95
CHMP1AP1-201ENST00000445563 PSME1Q06323 249 aa20.98■□□□□ 0.95
CHMP1AP1-201ENST00000445563 SPATA31A6Q5VVP1 1343 aa20.98■□□□□ 0.95
CHMP1AP1-201ENST00000445563 SPATA31A3Q5VYP0 1347 aa20.98■□□□□ 0.95
CHMP1AP1-201ENST00000445563 SBNO1A3KN83 1393 aa20.97■□□□□ 0.95
CHMP1AP1-201ENST00000445563 SHPRHQ149N8 1683 aa20.97■□□□□ 0.95
CHMP1AP1-201ENST00000445563 ACEP12821 1306 aa20.97■□□□□ 0.95
CHMP1AP1-201ENST00000445563 PPIP5K1Q6PFW1 1433 aa20.96■□□□□ 0.95
CHMP1AP1-201ENST00000445563 ITSN1Q15811 1721 aa20.96■□□□□ 0.95
CHMP1AP1-201ENST00000445563 NGDNQ8NEJ9 315 aaKnown RBP20.96■□□□□ 0.95
CHMP1AP1-201ENST00000445563 CABP1Q9NZU7 370 aa20.96■□□□□ 0.95
CHMP1AP1-201ENST00000445563 ATAD2Q6PL18 1390 aa20.95■□□□□ 0.94
CHMP1AP1-201ENST00000445563 MED1Q15648 1581 aaPredicted RBP20.93■□□□□ 0.94
CHMP1AP1-201ENST00000445563 EIF4G2P78344 907 aaKnown RBP eCLIP20.92■□□□□ 0.94
CHMP1AP1-201ENST00000445563 TNS3Q68CZ2 1445 aa20.92■□□□□ 0.94
CHMP1AP1-201ENST00000445563 LRP6O75581 1613 aa20.92■□□□□ 0.94
CHMP1AP1-201ENST00000445563 COL22A1Q8NFW1 1626 aaPredicted RBP20.91■□□□□ 0.94
CHMP1AP1-201ENST00000445563 TRPM3Q9HCF6 1732 aaPredicted RBP20.91■□□□□ 0.94
CHMP1AP1-201ENST00000445563 DISP3Q9P2K9 1392 aa20.91■□□□□ 0.94
CHMP1AP1-201ENST00000445563 HSPA5P11021 654 aaKnown RBP20.9■□□□□ 0.94
CHMP1AP1-201ENST00000445563 TMF1P82094 1093 aa20.9■□□□□ 0.94
CHMP1AP1-201ENST00000445563 CPSF1Q10570 1443 aaKnown RBP20.88■□□□□ 0.93
CHMP1AP1-201ENST00000445563 SSH2Q76I76 1423 aa20.87■□□□□ 0.93
CHMP1AP1-201ENST00000445563 ARHGEF10O15013 1369 aa20.87■□□□□ 0.93
CHMP1AP1-201ENST00000445563 BRD4O60885 1362 aaPredicted RBP20.87■□□□□ 0.93
CHMP1AP1-201ENST00000445563 NUTM2BA6NNL0 878 aaPredicted RBP20.86■□□□□ 0.93
CHMP1AP1-201ENST00000445563 NUTM2EB1AL46 878 aaPredicted RBP20.86■□□□□ 0.93
CHMP1AP1-201ENST00000445563 NUTM2AQ8IVF1 878 aaPredicted RBP20.86■□□□□ 0.93
CHMP1AP1-201ENST00000445563 ZNF692Q9BU19 519 aaPredicted RBP20.86■□□□□ 0.93
CHMP1AP1-201ENST00000445563 SLC12A5Q9H2X9 1139 aa20.86■□□□□ 0.93
CHMP1AP1-201ENST00000445563 CD163L1Q9NR16 1453 aa20.86■□□□□ 0.93
CHMP1AP1-201ENST00000445563 USP6P35125 1406 aa20.86■□□□□ 0.93
CHMP1AP1-201ENST00000445563 ALS2Q96Q42 1657 aa20.85■□□□□ 0.93
CHMP1AP1-201ENST00000445563 PAK3O75914 559 aaPredicted RBP20.83■□□□□ 0.93
CHMP1AP1-201ENST00000445563 CDCA8Q53HL2 280 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms