RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 ADAMTS2O95450 1211 aa11.22□□□□□ -0.61
BRAFP1-201ENST00000445336 NALCNQ8IZF0 1738 aa11.21□□□□□ -0.61
BRAFP1-201ENST00000445336 KLRG1Q96E93 195 aa11.21□□□□□ -0.61
BRAFP1-201ENST00000445336 HDGFP51858 240 aaKnown RBP11.21□□□□□ -0.62
BRAFP1-201ENST00000445336 EHMT2Q96KQ7 1210 aa11.2□□□□□ -0.62
BRAFP1-201ENST00000445336 MTUS2Q5JR59 1369 aa11.2□□□□□ -0.62
BRAFP1-201ENST00000445336 NRAPQ86VF7 1730 aa11.19□□□□□ -0.62
BRAFP1-201ENST00000445336 ZFYVE9O95405 1425 aa11.19□□□□□ -0.62
BRAFP1-201ENST00000445336 RSPH4AQ5TD94 716 aa11.19□□□□□ -0.62
BRAFP1-201ENST00000445336 MBD5Q9P267 1494 aa11.19□□□□□ -0.62
BRAFP1-201ENST00000445336 ATP10DQ9P241 1426 aa11.18□□□□□ -0.62
BRAFP1-201ENST00000445336 ADGRL3Q9HAR2 1447 aa11.18□□□□□ -0.62
BRAFP1-201ENST00000445336 LRRIQ1Q96JM4 1722 aa11.17□□□□□ -0.62
BRAFP1-201ENST00000445336 EZH2Q15910 746 aaKnown RBP11.17□□□□□ -0.62
BRAFP1-201ENST00000445336 SYT17Q9BSW7 474 aa11.17□□□□□ -0.62
BRAFP1-201ENST00000445336 NOS1P29475 1434 aa11.17□□□□□ -0.62
BRAFP1-201ENST00000445336 LMTK2Q8IWU2 1503 aa11.16□□□□□ -0.62
BRAFP1-201ENST00000445336 ADGRL2O95490 1459 aa11.16□□□□□ -0.62
BRAFP1-201ENST00000445336 KIF3BO15066 747 aa11.16□□□□□ -0.62
BRAFP1-201ENST00000445336 GRIN3BO60391 1043 aa11.16□□□□□ -0.62
BRAFP1-201ENST00000445336 ARHGEF28Q8N1W1 1705 aaKnown RBP11.15□□□□□ -0.62
BRAFP1-201ENST00000445336 PTGER2P43116 358 aa11.15□□□□□ -0.63
BRAFP1-201ENST00000445336 RRBP1Q9P2E9 1410 aaKnown RBP11.14□□□□□ -0.63
BRAFP1-201ENST00000445336 ARHGEF5Q12774 1597 aa11.14□□□□□ -0.63
BRAFP1-201ENST00000445336 C1orf167Q5SNV9 1468 aa11.14□□□□□ -0.63
BRAFP1-201ENST00000445336 PRAG1Q86YV5 1406 aa11.13□□□□□ -0.63
BRAFP1-201ENST00000445336 CCDC141Q6ZP82 1450 aa11.12□□□□□ -0.63
BRAFP1-201ENST00000445336 FAM196AQ6ZSG2 479 aa11.12□□□□□ -0.63
BRAFP1-201ENST00000445336 C14orf37Q86TY3 774 aa11.12□□□□□ -0.63
BRAFP1-201ENST00000445336 PXDNQ92626 1479 aa11.11□□□□□ -0.63
BRAFP1-201ENST00000445336 ADAMTS13Q76LX8 1427 aa11.11□□□□□ -0.63
BRAFP1-201ENST00000445336 SLC26A8Q96RN1 970 aa11.11□□□□□ -0.63
BRAFP1-201ENST00000445336 GPBP1L1Q9HC44 474 aaPredicted RBP11.11□□□□□ -0.63
BRAFP1-201ENST00000445336 PRDM10Q9NQV6 1147 aa11.11□□□□□ -0.63
BRAFP1-201ENST00000445336 QSER1Q2KHR3 1735 aa11.1□□□□□ -0.63
BRAFP1-201ENST00000445336 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.1□□□□□ -0.63
BRAFP1-201ENST00000445336 TULP4Q9NRJ4 1543 aa11.1□□□□□ -0.63
BRAFP1-201ENST00000445336 C10orf71Q711Q0 1435 aa11.1□□□□□ -0.63
BRAFP1-201ENST00000445336 MLLT1Q03111 559 aaPredicted RBP11.09□□□□□ -0.63
BRAFP1-201ENST00000445336 SGIP1Q9BQI5 828 aa11.09□□□□□ -0.63
BRAFP1-201ENST00000445336 LRPPRCP42704 1394 aaKnown RBP11.08□□□□□ -0.64
BRAFP1-201ENST00000445336 FHDC1Q9C0D6 1143 aaPredicted RBP11.08□□□□□ -0.64
BRAFP1-201ENST00000445336 ABCA3Q99758 1704 aa11.07□□□□□ -0.64
BRAFP1-201ENST00000445336 COL14A1Q05707 1796 aaKnown RBP11.06□□□□□ -0.64
BRAFP1-201ENST00000445336 MTFR1LQ9H019 292 aa11.06□□□□□ -0.64
BRAFP1-201ENST00000445336 SLC52A1Q9NWF4 448 aa11.05□□□□□ -0.64
BRAFP1-201ENST00000445336 KIF1AQ12756 1690 aa11.05□□□□□ -0.64
BRAFP1-201ENST00000445336 USP19O94966 1318 aa11.04□□□□□ -0.64
BRAFP1-201ENST00000445336 NPHP3Q7Z494 1330 aa11.04□□□□□ -0.64
BRAFP1-201ENST00000445336 FSTL1Q12841 308 aa11.04□□□□□ -0.64
BRAFP1-201ENST00000445336 FAM161AQ3B820 660 aa11.04□□□□□ -0.64
BRAFP1-201ENST00000445336 GPR162Q16538 588 aa11.03□□□□□ -0.64
BRAFP1-201ENST00000445336 RBM46Q8TBY0 533 aaKnown RBP11.03□□□□□ -0.64
BRAFP1-201ENST00000445336 CICQ96RK0 1608 aaPredicted RBP11.03□□□□□ -0.64
BRAFP1-201ENST00000445336 RIMS2Q9UQ26 1411 aa11.03□□□□□ -0.64
BRAFP1-201ENST00000445336 TOMM70O94826 608 aa11.03□□□□□ -0.64
BRAFP1-201ENST00000445336 KIF3CO14782 793 aa11.02□□□□□ -0.64
BRAFP1-201ENST00000445336 PITPNM2Q9BZ72 1349 aa11.02□□□□□ -0.65
BRAFP1-201ENST00000445336 STAG3Q9UJ98 1225 aa11.01□□□□□ -0.65
BRAFP1-201ENST00000445336 SRCAPQ6ZRS2 3230 aa11.01□□□□□ -0.65
BRAFP1-201ENST00000445336 DHX57Q6P158 1386 aaKnown RBP11.01□□□□□ -0.65
BRAFP1-201ENST00000445336 PLSCR1O15162 318 aa11.01□□□□□ -0.65
BRAFP1-201ENST00000445336 APBA3O96018 575 aa11□□□□□ -0.65
BRAFP1-201ENST00000445336 IQGAP3Q86VI3 1631 aa11□□□□□ -0.65
BRAFP1-201ENST00000445336 CASKIN1Q8WXD9 1431 aa11□□□□□ -0.65
BRAFP1-201ENST00000445336 DUOX2Q9NRD8 1548 aa11□□□□□ -0.65
BRAFP1-201ENST00000445336 PTPRUQ92729 1446 aa10.99□□□□□ -0.65
BRAFP1-201ENST00000445336 ARXQ96QS3 562 aa10.99□□□□□ -0.65
BRAFP1-201ENST00000445336 CDC42BPGQ6DT37 1551 aa10.98□□□□□ -0.65
BRAFP1-201ENST00000445336 GCC2Q8IWJ2 1684 aa10.98□□□□□ -0.65
BRAFP1-201ENST00000445336 HSPA1AP0DMV8 641 aaKnown RBP10.98□□□□□ -0.65
BRAFP1-201ENST00000445336 HSPA1BP0DMV9 641 aaKnown RBP10.98□□□□□ -0.65
BRAFP1-201ENST00000445336 CFDP1Q9UEE9 299 aaPredicted RBP10.98□□□□□ -0.65
BRAFP1-201ENST00000445336 CFAP65Q6ZU64 1925 aaKnown RBP10.97□□□□□ -0.65
BRAFP1-201ENST00000445336 CCNB3Q8WWL7 1395 aa10.96□□□□□ -0.65
BRAFP1-201ENST00000445336 EEA1Q15075 1411 aa10.96□□□□□ -0.66
BRAFP1-201ENST00000445336 BCL9O00512 1426 aa10.95□□□□□ -0.66
BRAFP1-201ENST00000445336 ERBINQ96RT1 1412 aa10.95□□□□□ -0.66
BRAFP1-201ENST00000445336 MYO5BQ9ULV0 1848 aa10.94□□□□□ -0.66
BRAFP1-201ENST00000445336 PEAK1Q9H792 1746 aa10.94□□□□□ -0.66
BRAFP1-201ENST00000445336 SPATA31A5Q5VU36 1347 aa10.94□□□□□ -0.66
BRAFP1-201ENST00000445336 SPATA31A7Q8IWB4 1347 aa10.94□□□□□ -0.66
BRAFP1-201ENST00000445336 PXDNLA1KZ92 1463 aa10.94□□□□□ -0.66
BRAFP1-201ENST00000445336 GCC1Q96CN9 775 aa10.94□□□□□ -0.66
BRAFP1-201ENST00000445336 AMOTL2Q9Y2J4 779 aa10.94□□□□□ -0.66
BRAFP1-201ENST00000445336 IDI1Q13907 227 aa10.93□□□□□ -0.66
BRAFP1-201ENST00000445336 CCDC144AA2RUR9 1427 aa10.93□□□□□ -0.66
BRAFP1-201ENST00000445336 NRXN3Q9Y4C0 1643 aa10.93□□□□□ -0.66
BRAFP1-201ENST00000445336 PARP4Q9UKK3 1724 aaKnown RBP10.93□□□□□ -0.66
BRAFP1-201ENST00000445336 EP400Q96L91 3159 aa10.92□□□□□ -0.66
BRAFP1-201ENST00000445336 SLC16A10Q8TF71 515 aa10.92□□□□□ -0.66
BRAFP1-201ENST00000445336 SBF2Q86WG5 1849 aa10.92□□□□□ -0.66
BRAFP1-201ENST00000445336 KIF15Q9NS87 1388 aa10.92□□□□□ -0.66
BRAFP1-201ENST00000445336 ZNF777Q9ULD5 760 aaPredicted RBP10.91□□□□□ -0.66
BRAFP1-201ENST00000445336 TOPAZ1Q8N9V7 1692 aa10.91□□□□□ -0.66
BRAFP1-201ENST00000445336 PAPPAQ13219 1627 aa10.91□□□□□ -0.66
BRAFP1-201ENST00000445336 SPATA31A3Q5VYP0 1347 aa10.9□□□□□ -0.66
BRAFP1-201ENST00000445336 BRD4O60885 1362 aaPredicted RBP10.9□□□□□ -0.66
BRAFP1-201ENST00000445336 TRIM37O94972 964 aa10.9□□□□□ -0.66
BRAFP1-201ENST00000445336 KANK1Q14678 1352 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms