RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 SAFB2Q14151 953 aaKnown RBP eCLIP21.18■□□□□ 0.98
CCNE1-203ENST00000444983 ADGRB2O60241 1585 aa21.18■□□□□ 0.98
CCNE1-203ENST00000444983 DISP3Q9P2K9 1392 aa21.17■□□□□ 0.98
CCNE1-203ENST00000444983 TULP4Q9NRJ4 1543 aa21.17■□□□□ 0.98
CCNE1-203ENST00000444983 NCOA3Q9Y6Q9 1424 aa21.15■□□□□ 0.98
CCNE1-203ENST00000444983 TMF1P82094 1093 aa21.15■□□□□ 0.98
CCNE1-203ENST00000444983 XIRP1Q702N8 1843 aaKnown RBP21.14■□□□□ 0.98
CCNE1-203ENST00000444983 NALCNQ8IZF0 1738 aa21.14■□□□□ 0.98
CCNE1-203ENST00000444983 LTBP4Q8N2S1 1624 aa21.14■□□□□ 0.98
CCNE1-203ENST00000444983 LRRC7Q96NW7 1537 aa21.14■□□□□ 0.97
CCNE1-203ENST00000444983 MINK1Q8N4C8 1332 aaPredicted RBP21.14■□□□□ 0.97
CCNE1-203ENST00000444983 PROSER2Q86WR7 435 aaPredicted RBP21.14■□□□□ 0.97
CCNE1-203ENST00000444983 WASHC2AQ641Q2 1341 aa21.13■□□□□ 0.97
CCNE1-203ENST00000444983 ADGRL3Q9HAR2 1447 aa21.12■□□□□ 0.97
CCNE1-203ENST00000444983 TMEM94Q12767 1356 aa21.12■□□□□ 0.97
CCNE1-203ENST00000444983 KIF7Q2M1P5 1343 aa21.12■□□□□ 0.97
CCNE1-203ENST00000444983 RBM33Q96EV2 1170 aaKnown RBP21.12■□□□□ 0.97
CCNE1-203ENST00000444983 EVC2Q86UK5 1308 aa21.11■□□□□ 0.97
CCNE1-203ENST00000444983 PUS7Q96PZ0 661 aaKnown RBP21.11■□□□□ 0.97
CCNE1-203ENST00000444983 CCDC7Q96M83 1385 aa21.1■□□□□ 0.97
CCNE1-203ENST00000444983 WASLO00401 505 aaPredicted RBP21.1■□□□□ 0.97
CCNE1-203ENST00000444983 CDC42BPGQ6DT37 1551 aa21.09■□□□□ 0.97
CCNE1-203ENST00000444983 CDK19Q9BWU1 502 aa21.08■□□□□ 0.96
CCNE1-203ENST00000444983 CDCA8Q53HL2 280 aa21.07■□□□□ 0.96
CCNE1-203ENST00000444983 C19orf44Q9H6X5 657 aa21.05■□□□□ 0.96
CCNE1-203ENST00000444983 FMN2Q9NZ56 1722 aa21.05■□□□□ 0.96
CCNE1-203ENST00000444983 CABP2Q9NPB3 220 aa21.04■□□□□ 0.96
CCNE1-203ENST00000444983 DCCP43146 1447 aa21.04■□□□□ 0.96
CCNE1-203ENST00000444983 USP32Q8NFA0 1604 aa21.04■□□□□ 0.96
CCNE1-203ENST00000444983 MYOM1P52179 1685 aa21.03■□□□□ 0.96
CCNE1-203ENST00000444983 ATP7BP35670 1465 aa21.02■□□□□ 0.96
CCNE1-203ENST00000444983 SRPK2P78362 688 aaKnown RBP21.02■□□□□ 0.95
CCNE1-203ENST00000444983 PRR36Q9H6K5 1346 aa21.01■□□□□ 0.95
CCNE1-203ENST00000444983 ATAD2Q6PL18 1390 aa21■□□□□ 0.95
CCNE1-203ENST00000444983 C14orf37Q86TY3 774 aa20.99■□□□□ 0.95
CCNE1-203ENST00000444983 TOPAZ1Q8N9V7 1692 aa20.99■□□□□ 0.95
CCNE1-203ENST00000444983 ANKARQ7Z5J8 1434 aa20.99■□□□□ 0.95
CCNE1-203ENST00000444983 NUDT16Q96DE0 195 aaKnown RBP20.99■□□□□ 0.95
CCNE1-203ENST00000444983 RGPD8O14715 1765 aaPredicted RBP20.99■□□□□ 0.95
CCNE1-203ENST00000444983 MSH6P52701 1360 aa20.98■□□□□ 0.95
CCNE1-203ENST00000444983 CCDC61Q9Y6R9 512 aa20.96■□□□□ 0.95
CCNE1-203ENST00000444983 NINLQ9Y2I6 1382 aa20.96■□□□□ 0.95
CCNE1-203ENST00000444983 MST1RQ04912 1400 aa20.95■□□□□ 0.94
CCNE1-203ENST00000444983 CADPS2Q86UW7 1296 aa20.95■□□□□ 0.94
CCNE1-203ENST00000444983 POLR3GLQ9BT43 218 aa20.95■□□□□ 0.94
CCNE1-203ENST00000444983 ITSN1Q15811 1721 aa20.95■□□□□ 0.94
CCNE1-203ENST00000444983 SLC12A5Q9H2X9 1139 aa20.94■□□□□ 0.94
CCNE1-203ENST00000444983 NUTM2FA1L443 756 aa20.93■□□□□ 0.94
CCNE1-203ENST00000444983 ATF3P18847 181 aa20.93■□□□□ 0.94
CCNE1-203ENST00000444983 CD163L1Q9NR16 1453 aa20.93■□□□□ 0.94
CCNE1-203ENST00000444983 PPIP5K1Q6PFW1 1433 aa20.93■□□□□ 0.94
CCNE1-203ENST00000444983 DDX10Q13206 875 aaKnown RBP20.93■□□□□ 0.94
CCNE1-203ENST00000444983 CABP1Q9NZU7 370 aa20.93■□□□□ 0.94
CCNE1-203ENST00000444983 C1orf167Q5SNV9 1468 aa20.92■□□□□ 0.94
CCNE1-203ENST00000444983 PLEKHG3A1L390 1219 aa20.92■□□□□ 0.94
CCNE1-203ENST00000444983 IQSEC2Q5JU85 1478 aa20.9■□□□□ 0.94
CCNE1-203ENST00000444983 CPSF1Q10570 1443 aaKnown RBP20.9■□□□□ 0.94
CCNE1-203ENST00000444983 TMC1Q8TDI8 760 aa20.89■□□□□ 0.94
CCNE1-203ENST00000444983 ANKRD36BQ8N2N9 1353 aa20.89■□□□□ 0.93
CCNE1-203ENST00000444983 PER1O15534 1290 aaPredicted RBP20.88■□□□□ 0.93
CCNE1-203ENST00000444983 PANK3Q9H999 370 aa20.88■□□□□ 0.93
CCNE1-203ENST00000444983 POLR3AO14802 1390 aaPredicted RBP20.88■□□□□ 0.93
CCNE1-203ENST00000444983 AKAP12Q02952 1782 aa20.87■□□□□ 0.93
CCNE1-203ENST00000444983 A0A1W2PP64 1363 aa20.86■□□□□ 0.93
CCNE1-203ENST00000444983 SLAIN2Q9P270 581 aa20.86■□□□□ 0.93
CCNE1-203ENST00000444983 ORAI2Q96SN7 254 aa20.86■□□□□ 0.93
CCNE1-203ENST00000444983 CARD14Q9BXL6 1004 aa20.86■□□□□ 0.93
CCNE1-203ENST00000444983 ESCO1Q5FWF5 840 aa20.84■□□□□ 0.93
CCNE1-203ENST00000444983 TERF2IPQ9NYB0 399 aa20.84■□□□□ 0.93
CCNE1-203ENST00000444983 PHF8Q9UPP1 1060 aa20.84■□□□□ 0.93
CCNE1-203ENST00000444983 ACEP12821 1306 aa20.84■□□□□ 0.93
CCNE1-203ENST00000444983 KIF1AQ12756 1690 aa20.84■□□□□ 0.93
CCNE1-203ENST00000444983 MON2Q7Z3U7 1717 aa20.83■□□□□ 0.93
CCNE1-203ENST00000444983 PMFBP1Q8TBY8 1022 aa20.83■□□□□ 0.92
CCNE1-203ENST00000444983 CERKQ8TCT0 537 aa20.83■□□□□ 0.92
CCNE1-203ENST00000444983 ZNF692Q9BU19 519 aaPredicted RBP20.82■□□□□ 0.92
CCNE1-203ENST00000444983 SSH2Q76I76 1423 aa20.81■□□□□ 0.92
CCNE1-203ENST00000444983 NRKQ7Z2Y5 1582 aa20.8■□□□□ 0.92
CCNE1-203ENST00000444983 BRINP3Q76B58 766 aa20.8■□□□□ 0.92
CCNE1-203ENST00000444983 HDGFL2Q7Z4V5 671 aaPredicted RBP20.8■□□□□ 0.92
CCNE1-203ENST00000444983 USP6P35125 1406 aa20.79■□□□□ 0.92
CCNE1-203ENST00000444983 KTN1Q86UP2 1357 aaKnown RBP20.79■□□□□ 0.92
CCNE1-203ENST00000444983 NGDNQ8NEJ9 315 aaKnown RBP20.77■□□□□ 0.92
CCNE1-203ENST00000444983 NSD3Q9BZ95 1437 aa20.77■□□□□ 0.92
CCNE1-203ENST00000444983 EDC4Q6P2E9 1401 aaKnown RBP20.77■□□□□ 0.91
CCNE1-203ENST00000444983 FOXO3O43524 673 aa20.76■□□□□ 0.91
CCNE1-203ENST00000444983 AMER1Q5JTC6 1135 aaPredicted RBP20.76■□□□□ 0.91
CCNE1-203ENST00000444983 DIEXFQ68CQ4 756 aaKnown RBP20.76■□□□□ 0.91
CCNE1-203ENST00000444983 TOM1O60784 492 aa20.75■□□□□ 0.91
CCNE1-203ENST00000444983 BRD4O60885 1362 aaPredicted RBP20.74■□□□□ 0.91
CCNE1-203ENST00000444983 NPC1L1Q9UHC9 1359 aa20.74■□□□□ 0.91
CCNE1-203ENST00000444983 ROBO1Q9Y6N7 1651 aa20.74■□□□□ 0.91
CCNE1-203ENST00000444983 KNSTRNQ9Y448 316 aa20.74■□□□□ 0.91
CCNE1-203ENST00000444983 NHSL1Q5SYE7 1610 aa20.74■□□□□ 0.91
CCNE1-203ENST00000444983 TRPM3Q9HCF6 1732 aaPredicted RBP20.73■□□□□ 0.91
CCNE1-203ENST00000444983 PXDNQ92626 1479 aa20.72■□□□□ 0.91
CCNE1-203ENST00000444983 NPHP3Q7Z494 1330 aa20.71■□□□□ 0.91
CCNE1-203ENST00000444983 TTC21BQ7Z4L5 1316 aa20.71■□□□□ 0.91
CCNE1-203ENST00000444983 PSME1Q06323 249 aa20.7■□□□□ 0.91
CCNE1-203ENST00000444983 CGNL1Q0VF96 1302 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms