RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 SYMPKQ92797 1274 aaKnown RBP9.51□□□□□ -0.89
HMGB3P6-201ENST00000444896 PCDHB3Q9Y5E6 796 aa9.51□□□□□ -0.89
HMGB3P6-201ENST00000444896 BLOC1S3Q6QNY0 202 aa9.5□□□□□ -0.89
HMGB3P6-201ENST00000444896 SCUBE3Q8IX30 993 aa9.5□□□□□ -0.89
HMGB3P6-201ENST00000444896 ZBTB3Q9H5J0 574 aa9.5□□□□□ -0.89
HMGB3P6-201ENST00000444896 MTMR2Q13614 643 aa9.48□□□□□ -0.89
HMGB3P6-201ENST00000444896 THAP11Q96EK4 314 aa9.48□□□□□ -0.89
HMGB3P6-201ENST00000444896 TIMELESSQ9UNS1 1208 aa9.48□□□□□ -0.89
HMGB3P6-201ENST00000444896 NUTM2BA6NNL0 878 aaPredicted RBP9.47□□□□□ -0.89
HMGB3P6-201ENST00000444896 NUTM2EB1AL46 878 aaPredicted RBP9.47□□□□□ -0.89
HMGB3P6-201ENST00000444896 NUTM2DQ5VT03 806 aaPredicted RBP9.47□□□□□ -0.89
HMGB3P6-201ENST00000444896 RNF19BQ6ZMZ0 732 aa9.47□□□□□ -0.89
HMGB3P6-201ENST00000444896 NUTM2AQ8IVF1 878 aaPredicted RBP9.47□□□□□ -0.89
HMGB3P6-201ENST00000444896 C6orf229H3BNL8 230 aa9.46□□□□□ -0.9
HMGB3P6-201ENST00000444896 BRICD5Q6PL45 260 aa9.46□□□□□ -0.9
HMGB3P6-201ENST00000444896 CFAP99D6REC4 459 aa9.45□□□□□ -0.9
HMGB3P6-201ENST00000444896 COPS2P61201 443 aa9.45□□□□□ -0.9
HMGB3P6-201ENST00000444896 SALL2Q9Y467 1007 aaPredicted RBP9.45□□□□□ -0.9
HMGB3P6-201ENST00000444896 NR1I2O75469 434 aa9.44□□□□□ -0.9
HMGB3P6-201ENST00000444896 Q3C1V9 767 aa9.44□□□□□ -0.9
HMGB3P6-201ENST00000444896 TMEM259Q4ZIN3 620 aa9.44□□□□□ -0.9
HMGB3P6-201ENST00000444896 SPDYE5A6NIY4 337 aa9.43□□□□□ -0.9
HMGB3P6-201ENST00000444896 TJAP1Q5JTD0 557 aa9.43□□□□□ -0.9
HMGB3P6-201ENST00000444896 RETREG3Q86VR2 466 aa9.43□□□□□ -0.9
HMGB3P6-201ENST00000444896 BANK1Q8NDB2 785 aa9.43□□□□□ -0.9
HMGB3P6-201ENST00000444896 MTRQ99707 1265 aa9.43□□□□□ -0.9
HMGB3P6-201ENST00000444896 PRR7Q8TB68 274 aa9.42□□□□□ -0.9
HMGB3P6-201ENST00000444896 ZNF516Q92618 1163 aa9.42□□□□□ -0.9
HMGB3P6-201ENST00000444896 SNRKQ9NRH2 765 aa9.42□□□□□ -0.9
HMGB3P6-201ENST00000444896 AP1G2O75843 785 aa9.41□□□□□ -0.9
HMGB3P6-201ENST00000444896 FMNL1O95466 1100 aaPredicted RBP9.41□□□□□ -0.9
HMGB3P6-201ENST00000444896 CTDSPL2Q05D32 466 aa9.41□□□□□ -0.9
HMGB3P6-201ENST00000444896 FLIIQ13045 1269 aa9.41□□□□□ -0.9
HMGB3P6-201ENST00000444896 MCM6Q14566 821 aa9.41□□□□□ -0.9
HMGB3P6-201ENST00000444896 ZPR1O75312 459 aa9.4□□□□□ -0.9
HMGB3P6-201ENST00000444896 C14orf37Q86TY3 774 aa9.4□□□□□ -0.9
HMGB3P6-201ENST00000444896 FAM160A2Q8N612 972 aaPredicted RBP9.4□□□□□ -0.9
HMGB3P6-201ENST00000444896 USB1Q9BQ65 265 aaKnown RBP9.4□□□□□ -0.9
HMGB3P6-201ENST00000444896 IL21Q9HBE4 155 aa9.39□□□□□ -0.91
HMGB3P6-201ENST00000444896 PLA2G2EQ9NZK7 142 aa9.39□□□□□ -0.91
HMGB3P6-201ENST00000444896 TLL1O43897 1013 aa9.38□□□□□ -0.91
HMGB3P6-201ENST00000444896 KCNC4Q03721 635 aa9.38□□□□□ -0.91
HMGB3P6-201ENST00000444896 SPSB2Q99619 263 aa9.38□□□□□ -0.91
HMGB3P6-201ENST00000444896 USP17L8P0C7I0 530 aa9.37□□□□□ -0.91
HMGB3P6-201ENST00000444896 MTMR14Q8NCE2 650 aa9.37□□□□□ -0.91
HMGB3P6-201ENST00000444896 PER1O15534 1290 aaPredicted RBP9.36□□□□□ -0.91
HMGB3P6-201ENST00000444896 MSS51Q4VC12 460 aa9.36□□□□□ -0.91
HMGB3P6-201ENST00000444896 DESI1Q6ICB0 168 aa9.36□□□□□ -0.91
HMGB3P6-201ENST00000444896 ERICH6Q7L0X2 663 aa9.36□□□□□ -0.91
HMGB3P6-201ENST00000444896 NKX2-3Q8TAU0 364 aa9.36□□□□□ -0.91
HMGB3P6-201ENST00000444896 TSC1Q92574 1164 aa9.36□□□□□ -0.91
HMGB3P6-201ENST00000444896 HELBQ8NG08 1087 aaPredicted RBP9.35□□□□□ -0.91
HMGB3P6-201ENST00000444896 LRRN4Q8WUT4 740 aa9.35□□□□□ -0.91
HMGB3P6-201ENST00000444896 ADH1BP00325 375 aa9.34□□□□□ -0.91
HMGB3P6-201ENST00000444896 LYPD8Q6UX82 237 aa9.34□□□□□ -0.91
HMGB3P6-201ENST00000444896 GJD4Q96KN9 370 aaPredicted RBP9.34□□□□□ -0.91
HMGB3P6-201ENST00000444896 HMX1Q9NP08 348 aaPredicted RBP9.34□□□□□ -0.91
HMGB3P6-201ENST00000444896 PRDM9Q9NQV7 894 aa9.34□□□□□ -0.91
HMGB3P6-201ENST00000444896 SOCS7O14512 581 aa9.33□□□□□ -0.92
HMGB3P6-201ENST00000444896 JUNDP17535 347 aa9.33□□□□□ -0.92
HMGB3P6-201ENST00000444896 MMP16P51512 607 aa9.33□□□□□ -0.92
HMGB3P6-201ENST00000444896 ZMYND15Q9H091 742 aa9.33□□□□□ -0.92
HMGB3P6-201ENST00000444896 DXOO77932 396 aaKnown RBP9.32□□□□□ -0.92
HMGB3P6-201ENST00000444896 ITGBL1O95965 494 aaPredicted RBP9.32□□□□□ -0.92
HMGB3P6-201ENST00000444896 POM121Q96HA1 1249 aa9.32□□□□□ -0.92
HMGB3P6-201ENST00000444896 CLUAP1Q96AJ1 413 aa9.31□□□□□ -0.92
HMGB3P6-201ENST00000444896 TRIM34Q9BYJ4 488 aa9.31□□□□□ -0.92
HMGB3P6-201ENST00000444896 UBTFP17480 764 aaKnown RBP9.3□□□□□ -0.92
HMGB3P6-201ENST00000444896 EPS8L1Q8TE68 723 aa9.3□□□□□ -0.92
HMGB3P6-201ENST00000444896 SLC6A16Q9GZN6 736 aa9.3□□□□□ -0.92
HMGB3P6-201ENST00000444896 COG6Q9Y2V7 657 aa9.3□□□□□ -0.92
HMGB3P6-201ENST00000444896 F12P00748 615 aaPredicted RBP9.28□□□□□ -0.92
HMGB3P6-201ENST00000444896 GGCXP38435 758 aa9.28□□□□□ -0.92
HMGB3P6-201ENST00000444896 PTPRNQ16849 979 aa9.28□□□□□ -0.92
HMGB3P6-201ENST00000444896 A6NJR5 290 aa9.27□□□□□ -0.93
HMGB3P6-201ENST00000444896 S1PR4O95977 384 aa9.27□□□□□ -0.93
HMGB3P6-201ENST00000444896 NR6A1Q15406 480 aa9.27□□□□□ -0.93
HMGB3P6-201ENST00000444896 GPR37L1O60883 481 aa9.26□□□□□ -0.93
HMGB3P6-201ENST00000444896 GDPD2Q9HCC8 539 aa9.26□□□□□ -0.93
HMGB3P6-201ENST00000444896 EVA1BQ9NVM1 165 aa9.26□□□□□ -0.93
HMGB3P6-201ENST00000444896 TBC1D2BQ9UPU7 963 aa9.26□□□□□ -0.93
HMGB3P6-201ENST00000444896 NUDT12Q9BQG2 462 aa9.25□□□□□ -0.93
HMGB3P6-201ENST00000444896 MAP10Q9P2G4 905 aa9.25□□□□□ -0.93
HMGB3P6-201ENST00000444896 FNBP4Q8N3X1 1017 aaPredicted RBP9.24□□□□□ -0.93
HMGB3P6-201ENST00000444896 PPEF1O14829 653 aaPredicted RBP9.23□□□□□ -0.93
HMGB3P6-201ENST00000444896 CCNYL3P0C7X3 344 aa9.23□□□□□ -0.93
HMGB3P6-201ENST00000444896 KCNH2Q12809 1159 aa9.23□□□□□ -0.93
HMGB3P6-201ENST00000444896 PTCRAQ6ISU1 281 aaPredicted RBP9.23□□□□□ -0.93
HMGB3P6-201ENST00000444896 RAD21O60216 631 aa9.22□□□□□ -0.93
HMGB3P6-201ENST00000444896 NDUFB9Q9Y6M9 179 aa9.22□□□□□ -0.93
HMGB3P6-201ENST00000444896 APBB1O00213 710 aa9.21□□□□□ -0.94
HMGB3P6-201ENST00000444896 CTHP32929 405 aa9.21□□□□□ -0.94
HMGB3P6-201ENST00000444896 IRF5Q13568 498 aa9.21□□□□□ -0.94
HMGB3P6-201ENST00000444896 IFFO2Q5TF58 517 aa9.21□□□□□ -0.94
HMGB3P6-201ENST00000444896 RNF223E7ERA6 249 aa9.2□□□□□ -0.94
HMGB3P6-201ENST00000444896 TRAK2O60296 914 aa9.2□□□□□ -0.94
HMGB3P6-201ENST00000444896 ABL2P42684 1182 aa9.2□□□□□ -0.94
HMGB3P6-201ENST00000444896 PPP1R18Q6NYC8 613 aa9.2□□□□□ -0.94
HMGB3P6-201ENST00000444896 PROSER2Q86WR7 435 aaPredicted RBP9.2□□□□□ -0.94
HMGB3P6-201ENST00000444896 CCDC24Q8N4L8 307 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms