RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 A2ML1A8K2U0 1454 aa18.25■□□□□ 0.51
RBM39-216ENST00000444878 TULP4Q9NRJ4 1543 aa18.24■□□□□ 0.51
RBM39-216ENST00000444878 ALKQ9UM73 1620 aa18.24■□□□□ 0.51
RBM39-216ENST00000444878 NSD3Q9BZ95 1437 aa18.24■□□□□ 0.51
RBM39-216ENST00000444878 SAFB2Q14151 953 aaKnown RBP eCLIP18.23■□□□□ 0.51
RBM39-216ENST00000444878 ZMYM3Q14202 1370 aa18.23■□□□□ 0.51
RBM39-216ENST00000444878 YTHDC2Q9H6S0 1430 aaKnown RBP18.23■□□□□ 0.51
RBM39-216ENST00000444878 PPP4R2Q9NY27 417 aa18.22■□□□□ 0.51
RBM39-216ENST00000444878 PTPRMP28827 1452 aa18.2■□□□□ 0.5
RBM39-216ENST00000444878 RIMS2Q9UQ26 1411 aa18.2■□□□□ 0.5
RBM39-216ENST00000444878 RNF123Q5XPI4 1314 aa18.2■□□□□ 0.5
RBM39-216ENST00000444878 CABP2Q9NPB3 220 aa18.2■□□□□ 0.5
RBM39-216ENST00000444878 POGKQ9P215 609 aa18.2■□□□□ 0.5
RBM39-216ENST00000444878 USP32Q8NFA0 1604 aa18.19■□□□□ 0.5
RBM39-216ENST00000444878 PRAM1Q96QH2 718 aa18.19■□□□□ 0.5
RBM39-216ENST00000444878 SRPK2P78362 688 aaKnown RBP18.17■□□□□ 0.5
RBM39-216ENST00000444878 ANKRD36BQ8N2N9 1353 aa18.17■□□□□ 0.5
RBM39-216ENST00000444878 CGNL1Q0VF96 1302 aa18.17■□□□□ 0.5
RBM39-216ENST00000444878 MORC1Q86VD1 984 aa18.17■□□□□ 0.5
RBM39-216ENST00000444878 TSHZ2Q9NRE2 1034 aa18.17■□□□□ 0.5
RBM39-216ENST00000444878 MINK1Q8N4C8 1332 aaPredicted RBP18.16■□□□□ 0.5
RBM39-216ENST00000444878 HOMEZQ8IX15 550 aa18.16■□□□□ 0.5
RBM39-216ENST00000444878 CDCA7LQ96GN5 454 aa18.15■□□□□ 0.5
RBM39-216ENST00000444878 NINLQ9Y2I6 1382 aa18.15■□□□□ 0.5
RBM39-216ENST00000444878 SETD1AO15047 1707 aaKnown RBP18.15■□□□□ 0.5
RBM39-216ENST00000444878 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.14■□□□□ 0.5
RBM39-216ENST00000444878 RCAN3Q9UKA8 241 aa18.13■□□□□ 0.49
RBM39-216ENST00000444878 ATAD2Q6PL18 1390 aa18.13■□□□□ 0.49
RBM39-216ENST00000444878 TNRQ92752 1358 aa18.13■□□□□ 0.49
RBM39-216ENST00000444878 POLR3AO14802 1390 aaPredicted RBP18.13■□□□□ 0.49
RBM39-216ENST00000444878 TNNT2P45379 298 aaPredicted RBP18.11■□□□□ 0.49
RBM39-216ENST00000444878 HDGFP51858 240 aaKnown RBP18.11■□□□□ 0.49
RBM39-216ENST00000444878 NSD2O96028 1365 aa18.11■□□□□ 0.49
RBM39-216ENST00000444878 DLC1Q96QB1 1528 aa18.11■□□□□ 0.49
RBM39-216ENST00000444878 B4GALNT3Q6L9W6 998 aa18.1■□□□□ 0.49
RBM39-216ENST00000444878 NRXN3Q9Y4C0 1643 aa18.1■□□□□ 0.49
RBM39-216ENST00000444878 CCDC146Q8IYE0 955 aa18.1■□□□□ 0.49
RBM39-216ENST00000444878 A0A1W2PP64 1363 aa18.09■□□□□ 0.49
RBM39-216ENST00000444878 UBR1Q8IWV7 1749 aa18.09■□□□□ 0.49
RBM39-216ENST00000444878 PLEKHH1Q9ULM0 1364 aa18.09■□□□□ 0.49
RBM39-216ENST00000444878 RRP1P56182 461 aaKnown RBP18.08■□□□□ 0.49
RBM39-216ENST00000444878 CDK19Q9BWU1 502 aa18.08■□□□□ 0.49
RBM39-216ENST00000444878 TERF2IPQ9NYB0 399 aa18.08■□□□□ 0.49
RBM39-216ENST00000444878 ABCC11Q96J66 1382 aa18.07■□□□□ 0.48
RBM39-216ENST00000444878 WAPLQ7Z5K2 1190 aa18.07■□□□□ 0.48
RBM39-216ENST00000444878 SHPRHQ149N8 1683 aa18.06■□□□□ 0.48
RBM39-216ENST00000444878 APAF1O14727 1248 aa18.05■□□□□ 0.48
RBM39-216ENST00000444878 ZNF521Q96K83 1311 aa18.05■□□□□ 0.48
RBM39-216ENST00000444878 MTHFSP49914 203 aa18.05■□□□□ 0.48
RBM39-216ENST00000444878 GOLGA2Q08379 1002 aa18.05■□□□□ 0.48
RBM39-216ENST00000444878 TMEM2Q9UHN6 1383 aa18.04■□□□□ 0.48
RBM39-216ENST00000444878 CFAP53Q96M91 514 aa18.04■□□□□ 0.48
RBM39-216ENST00000444878 METP08581 1390 aa18.04■□□□□ 0.48
RBM39-216ENST00000444878 HDGFL2Q7Z4V5 671 aaPredicted RBP18.04■□□□□ 0.48
RBM39-216ENST00000444878 ANKRD26Q9UPS8 1709 aa18.03■□□□□ 0.48
RBM39-216ENST00000444878 CD163L1Q9NR16 1453 aa18.03■□□□□ 0.48
RBM39-216ENST00000444878 TRHP20396 242 aaPredicted RBP18.02■□□□□ 0.48
RBM39-216ENST00000444878 KNDC1Q76NI1 1749 aa18.02■□□□□ 0.48
RBM39-216ENST00000444878 NGEFQ8N5V2 710 aa18.02■□□□□ 0.47
RBM39-216ENST00000444878 CABP1Q9NZU7 370 aa18.02■□□□□ 0.47
RBM39-216ENST00000444878 NLRP1Q9C000 1473 aa18.01■□□□□ 0.47
RBM39-216ENST00000444878 CCDC136Q96JN2 1154 aa18.01■□□□□ 0.47
RBM39-216ENST00000444878 FER1L4A9Z1Z3 1794 aa18.01■□□□□ 0.47
RBM39-216ENST00000444878 C3P01024 1663 aa18.01■□□□□ 0.47
RBM39-216ENST00000444878 DUSP27Q5VZP5 1158 aa18.01■□□□□ 0.47
RBM39-216ENST00000444878 GGNBP2Q9H3C7 697 aa18.01■□□□□ 0.47
RBM39-216ENST00000444878 CEBPAP49715 358 aaPredicted RBP18■□□□□ 0.47
RBM39-216ENST00000444878 KIF20BQ96Q89 1820 aa18■□□□□ 0.47
RBM39-216ENST00000444878 TXNDC2Q86VQ3 553 aa17.99■□□□□ 0.47
RBM39-216ENST00000444878 TPRNQ4KMQ1 711 aa17.99■□□□□ 0.47
RBM39-216ENST00000444878 FYB1O15117 783 aa17.98■□□□□ 0.47
RBM39-216ENST00000444878 SLFN5Q08AF3 891 aa17.98■□□□□ 0.47
RBM39-216ENST00000444878 MED14O60244 1454 aa17.98■□□□□ 0.47
RBM39-216ENST00000444878 TECPR2O15040 1411 aa17.97■□□□□ 0.47
RBM39-216ENST00000444878 FAM135BQ49AJ0 1406 aa17.97■□□□□ 0.47
RBM39-216ENST00000444878 SIRT1Q96EB6 747 aa17.97■□□□□ 0.47
RBM39-216ENST00000444878 ATP7BP35670 1465 aa17.97■□□□□ 0.47
RBM39-216ENST00000444878 WASLO00401 505 aaPredicted RBP17.96■□□□□ 0.47
RBM39-216ENST00000444878 RUNDC1Q96C34 613 aa17.96■□□□□ 0.47
RBM39-216ENST00000444878 CPS1P31327 1500 aa17.96■□□□□ 0.47
RBM39-216ENST00000444878 EXOC6Q8TAG9 804 aa17.95■□□□□ 0.46
RBM39-216ENST00000444878 KLHL34Q8N239 644 aa17.95■□□□□ 0.46
RBM39-216ENST00000444878 PLEKHG1Q9ULL1 1385 aa17.94■□□□□ 0.46
RBM39-216ENST00000444878 ADAMTS13Q76LX8 1427 aa17.94■□□□□ 0.46
RBM39-216ENST00000444878 E9PSI1 815 aa17.94■□□□□ 0.46
RBM39-216ENST00000444878 PLIN1O60240 522 aa17.94■□□□□ 0.46
RBM39-216ENST00000444878 LTKP29376 864 aa17.94■□□□□ 0.46
RBM39-216ENST00000444878 TRMT2AQ8IZ69 625 aaKnown RBP17.94■□□□□ 0.46
RBM39-216ENST00000444878 RBM19Q9Y4C8 960 aaKnown RBP17.93■□□□□ 0.46
RBM39-216ENST00000444878 EID1Q9Y6B2 187 aa17.93■□□□□ 0.46
RBM39-216ENST00000444878 U2AF1L5P0DN76 240 aaPredicted RBP17.92■□□□□ 0.46
RBM39-216ENST00000444878 U2AF1Q01081 240 aaKnown RBP eCLIP17.92■□□□□ 0.468e-22■□□□□ 9.7
RBM39-216ENST00000444878 SPINK5Q9NQ38 1064 aaPredicted RBP17.92■□□□□ 0.46
RBM39-216ENST00000444878 PPIP5K1Q6PFW1 1433 aa17.92■□□□□ 0.46
RBM39-216ENST00000444878 WWC1Q8IX03 1113 aa17.92■□□□□ 0.46
RBM39-216ENST00000444878 TCP11L2Q8N4U5 519 aa17.92■□□□□ 0.46
RBM39-216ENST00000444878 NKTRP30414 1462 aaKnown RBP17.91■□□□□ 0.46
RBM39-216ENST00000444878 NEUROD2Q15784 382 aa17.91■□□□□ 0.46
RBM39-216ENST00000444878 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.91■□□□□ 0.46
RBM39-216ENST00000444878 NUDT16Q96DE0 195 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms