RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 PRAM1Q96QH2 718 aa25.04■■□□□ 1.6
SMARCAL1-209ENST00000444508 CLSPNQ9HAW4 1339 aa25.04■■□□□ 1.6
SMARCAL1-209ENST00000444508 MST1RQ04912 1400 aa25.03■■□□□ 1.6
SMARCAL1-209ENST00000444508 CDC42BPGQ6DT37 1551 aa25.03■■□□□ 1.6
SMARCAL1-209ENST00000444508 SAFB2Q14151 953 aaKnown RBP eCLIP25■■□□□ 1.59
SMARCAL1-209ENST00000444508 NBPF1Q3BBV0 1214 aa25■■□□□ 1.59
SMARCAL1-209ENST00000444508 CCER1Q8TC90 406 aaPredicted RBP25■■□□□ 1.59
SMARCAL1-209ENST00000444508 TRPM1Q7Z4N2 1603 aa24.99■■□□□ 1.59
SMARCAL1-209ENST00000444508 ARHGEF28Q8N1W1 1705 aaKnown RBP24.98■■□□□ 1.59
SMARCAL1-209ENST00000444508 C1orf167Q5SNV9 1468 aa24.96■■□□□ 1.59
SMARCAL1-209ENST00000444508 BRINP3Q76B58 766 aa24.96■■□□□ 1.59
SMARCAL1-209ENST00000444508 ROCK2O75116 1388 aaKnown RBP24.94■■□□□ 1.58
SMARCAL1-209ENST00000444508 PHLPP1O60346 1717 aa24.94■■□□□ 1.58
SMARCAL1-209ENST00000444508 NBPF8Q3BBV2 869 aa24.93■■□□□ 1.58
SMARCAL1-209ENST00000444508 FMN2Q9NZ56 1722 aa24.92■■□□□ 1.58
SMARCAL1-209ENST00000444508 ADGRB2O60241 1585 aa24.91■■□□□ 1.58
SMARCAL1-209ENST00000444508 AHDC1Q5TGY3 1603 aaPredicted RBP24.9■■□□□ 1.58
SMARCAL1-209ENST00000444508 MINK1Q8N4C8 1332 aaPredicted RBP24.9■■□□□ 1.58
SMARCAL1-209ENST00000444508 NUTM2FA1L443 756 aa24.89■■□□□ 1.58
SMARCAL1-209ENST00000444508 HIRIP3Q9BW71 556 aaPredicted RBP24.89■■□□□ 1.58
SMARCAL1-209ENST00000444508 TIMELESSQ9UNS1 1208 aa24.89■■□□□ 1.58
SMARCAL1-209ENST00000444508 ORAI2Q96SN7 254 aa24.88■■□□□ 1.57
SMARCAL1-209ENST00000444508 ESCO1Q5FWF5 840 aa24.87■■□□□ 1.57
SMARCAL1-209ENST00000444508 RALGAPBQ86X10 1494 aa24.87■■□□□ 1.57
SMARCAL1-209ENST00000444508 NHSL1Q5SYE7 1610 aa24.86■■□□□ 1.57
SMARCAL1-209ENST00000444508 GPRASP1Q5JY77 1395 aa24.86■■□□□ 1.57
SMARCAL1-209ENST00000444508 CENPJQ9HC77 1338 aaPredicted RBP24.86■■□□□ 1.57
SMARCAL1-209ENST00000444508 EIF3AQ14152 1382 aaKnown RBP24.85■■□□□ 1.57
SMARCAL1-209ENST00000444508 COL16A1Q07092 1604 aaPredicted RBP24.85■■□□□ 1.57
SMARCAL1-209ENST00000444508 WASLO00401 505 aaPredicted RBP24.83■■□□□ 1.57
SMARCAL1-209ENST00000444508 CARD11Q9BXL7 1154 aa24.83■■□□□ 1.57
SMARCAL1-209ENST00000444508 ANKARQ7Z5J8 1434 aa24.82■■□□□ 1.56
SMARCAL1-209ENST00000444508 DDX17Q92841 729 aaKnown RBP24.8■■□□□ 1.56
SMARCAL1-209ENST00000444508 KIF1AQ12756 1690 aa24.8■■□□□ 1.56
SMARCAL1-209ENST00000444508 QRICH2Q9H0J4 1663 aa24.8■■□□□ 1.56
SMARCAL1-209ENST00000444508 TULP4Q9NRJ4 1543 aa24.8■■□□□ 1.56
SMARCAL1-209ENST00000444508 RGPD8O14715 1765 aaPredicted RBP24.8■■□□□ 1.56
SMARCAL1-209ENST00000444508 JCADQ9P266 1359 aa24.8■■□□□ 1.56
SMARCAL1-209ENST00000444508 NPHP3Q7Z494 1330 aa24.78■■□□□ 1.56
SMARCAL1-209ENST00000444508 USP32Q8NFA0 1604 aa24.77■■□□□ 1.56
SMARCAL1-209ENST00000444508 LRRC59Q96AG4 307 aaKnown RBP24.76■■□□□ 1.55
SMARCAL1-209ENST00000444508 PHF8Q9UPP1 1060 aa24.76■■□□□ 1.55
SMARCAL1-209ENST00000444508 FOXO3O43524 673 aa24.75■■□□□ 1.55
SMARCAL1-209ENST00000444508 CDK19Q9BWU1 502 aa24.75■■□□□ 1.55
SMARCAL1-209ENST00000444508 SHPRHQ149N8 1683 aa24.73■■□□□ 1.55
SMARCAL1-209ENST00000444508 MED1Q15648 1581 aaPredicted RBP24.73■■□□□ 1.55
SMARCAL1-209ENST00000444508 SOS2Q07890 1332 aaPredicted RBP24.73■■□□□ 1.55
SMARCAL1-209ENST00000444508 PRR36Q9H6K5 1346 aa24.73■■□□□ 1.55
SMARCAL1-209ENST00000444508 ITSN1Q15811 1721 aa24.72■■□□□ 1.55
SMARCAL1-209ENST00000444508 NUDT16Q96DE0 195 aaKnown RBP24.71■■□□□ 1.55
SMARCAL1-209ENST00000444508 ATP7BP35670 1465 aa24.7■■□□□ 1.55
SMARCAL1-209ENST00000444508 SRPK2P78362 688 aaKnown RBP24.7■■□□□ 1.54
SMARCAL1-209ENST00000444508 PXDNQ92626 1479 aa24.7■■□□□ 1.54
SMARCAL1-209ENST00000444508 XPCQ01831 940 aaPredicted RBP24.69■■□□□ 1.54
SMARCAL1-209ENST00000444508 PMFBP1Q8TBY8 1022 aa24.69■■□□□ 1.54
SMARCAL1-209ENST00000444508 SPATA31A6Q5VVP1 1343 aa24.68■■□□□ 1.54
SMARCAL1-209ENST00000444508 EVC2Q86UK5 1308 aa24.68■■□□□ 1.54
SMARCAL1-209ENST00000444508 DISP3Q9P2K9 1392 aa24.67■■□□□ 1.54
SMARCAL1-209ENST00000444508 PSME1Q06323 249 aa24.66■■□□□ 1.54
SMARCAL1-209ENST00000444508 KRT28Q7Z3Y7 464 aa24.66■■□□□ 1.54
SMARCAL1-209ENST00000444508 SBNO2Q9Y2G9 1366 aa24.66■■□□□ 1.54
SMARCAL1-209ENST00000444508 CABP2Q9NPB3 220 aa24.65■■□□□ 1.54
SMARCAL1-209ENST00000444508 CCDC61Q9Y6R9 512 aa24.65■■□□□ 1.54
SMARCAL1-209ENST00000444508 TOPAZ1Q8N9V7 1692 aa24.65■■□□□ 1.54
SMARCAL1-209ENST00000444508 PNPLA6Q8IY17 1366 aa24.65■■□□□ 1.54
SMARCAL1-209ENST00000444508 NGDNQ8NEJ9 315 aaKnown RBP24.64■■□□□ 1.54
SMARCAL1-209ENST00000444508 PHF23Q9BUL5 403 aaPredicted RBP24.62■■□□□ 1.53
SMARCAL1-209ENST00000444508 USP47Q96K76 1375 aa24.61■■□□□ 1.53
SMARCAL1-209ENST00000444508 ST20-MTHFSA0A0A6YYL1 179 aa24.6■■□□□ 1.53
SMARCAL1-209ENST00000444508 NUTM2BA6NNL0 878 aaPredicted RBP24.6■■□□□ 1.53
SMARCAL1-209ENST00000444508 NUTM2EB1AL46 878 aaPredicted RBP24.6■■□□□ 1.53
SMARCAL1-209ENST00000444508 NUTM2AQ8IVF1 878 aaPredicted RBP24.6■■□□□ 1.53
SMARCAL1-209ENST00000444508 PPIP5K1Q6PFW1 1433 aa24.6■■□□□ 1.53
SMARCAL1-209ENST00000444508 SBNO1A3KN83 1393 aa24.59■■□□□ 1.53
SMARCAL1-209ENST00000444508 MEX3CQ5U5Q3 659 aaKnown RBP24.59■■□□□ 1.53
SMARCAL1-209ENST00000444508 SPATA31A3Q5VYP0 1347 aa24.59■■□□□ 1.53
SMARCAL1-209ENST00000444508 LRP6O75581 1613 aa24.58■■□□□ 1.53
SMARCAL1-209ENST00000444508 PLEKHG3A1L390 1219 aa24.58■■□□□ 1.53
SMARCAL1-209ENST00000444508 TNS3Q68CZ2 1445 aa24.58■■□□□ 1.53
SMARCAL1-209ENST00000444508 COL22A1Q8NFW1 1626 aaPredicted RBP24.57■■□□□ 1.52
SMARCAL1-209ENST00000444508 SLC24A1O60721 1099 aa24.57■■□□□ 1.52
SMARCAL1-209ENST00000444508 ACEP12821 1306 aa24.56■■□□□ 1.52
SMARCAL1-209ENST00000444508 POLR3AO14802 1390 aaPredicted RBP24.55■■□□□ 1.52
SMARCAL1-209ENST00000444508 ATAD2Q6PL18 1390 aa24.55■■□□□ 1.52
SMARCAL1-209ENST00000444508 LMOD2Q6P5Q4 547 aa24.55■■□□□ 1.52
SMARCAL1-209ENST00000444508 TRPM3Q9HCF6 1732 aaPredicted RBP24.54■■□□□ 1.52
SMARCAL1-209ENST00000444508 ARHGEF10O15013 1369 aa24.54■■□□□ 1.52
SMARCAL1-209ENST00000444508 CABP1Q9NZU7 370 aa24.53■■□□□ 1.52
SMARCAL1-209ENST00000444508 PAK3O75914 559 aaPredicted RBP24.52■■□□□ 1.52
SMARCAL1-209ENST00000444508 TESK2Q96S53 571 aa24.52■■□□□ 1.52
SMARCAL1-209ENST00000444508 ADAMTS2O95450 1211 aa24.48■■□□□ 1.51
SMARCAL1-209ENST00000444508 ALS2Q96Q42 1657 aa24.48■■□□□ 1.51
SMARCAL1-209ENST00000444508 TMF1P82094 1093 aa24.47■■□□□ 1.51
SMARCAL1-209ENST00000444508 PUS7Q96PZ0 661 aaKnown RBP24.47■■□□□ 1.51
SMARCAL1-209ENST00000444508 HAP1P54257 671 aaPredicted RBP24.46■■□□□ 1.51
SMARCAL1-209ENST00000444508 BRD4O60885 1362 aaPredicted RBP24.45■■□□□ 1.5
SMARCAL1-209ENST00000444508 PLEKHG5O94827 1062 aa24.45■■□□□ 1.5
SMARCAL1-209ENST00000444508 EIF4G2P78344 907 aaKnown RBP eCLIP24.44■■□□□ 1.5
SMARCAL1-209ENST00000444508 TMC1Q8TDI8 760 aa24.44■■□□□ 1.5
SMARCAL1-209ENST00000444508 C8orf37Q96NL8 207 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms