RNA–Protein interactions for RNA: ENST00000443977.1

PRKD3-204, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 518 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-204ENST00000443977 SLC24A1O60721 1099 aa6.93□□□□□ -1.3
PRKD3-204ENST00000443977 VSIG10Q8N0Z9 540 aa6.93□□□□□ -1.3
PRKD3-204ENST00000443977 MROH2BQ7Z745 1585 aa6.92□□□□□ -1.3
PRKD3-204ENST00000443977 FAM181BA6NEQ2 426 aa6.92□□□□□ -1.3
PRKD3-204ENST00000443977 MORN1Q5T089 497 aa6.92□□□□□ -1.3
PRKD3-204ENST00000443977 CECR2Q9BXF3 1484 aa6.92□□□□□ -1.3
PRKD3-204ENST00000443977 ATP6V1AP38606 617 aa6.91□□□□□ -1.3
PRKD3-204ENST00000443977 SNIP1Q8TAD8 396 aaKnown RBP6.91□□□□□ -1.3
PRKD3-204ENST00000443977 KCNV2Q8TDN2 545 aa6.91□□□□□ -1.3
PRKD3-204ENST00000443977 KIFC2Q96AC6 838 aa6.91□□□□□ -1.3
PRKD3-204ENST00000443977 ATP13A2Q9NQ11 1180 aa6.91□□□□□ -1.3
PRKD3-204ENST00000443977 WIZO95785 1651 aa6.9□□□□□ -1.3
PRKD3-204ENST00000443977 WNT7AO00755 349 aa6.9□□□□□ -1.3
PRKD3-204ENST00000443977 METTL3Q86U44 580 aaKnown RBP6.9□□□□□ -1.3
PRKD3-204ENST00000443977 FAM9AQ8IZU1 332 aaPredicted RBP6.9□□□□□ -1.3
PRKD3-204ENST00000443977 TERTO14746 1132 aaKnown RBP6.89□□□□□ -1.31
PRKD3-204ENST00000443977 FUT2Q10981 343 aa6.89□□□□□ -1.31
PRKD3-204ENST00000443977 HIC1Q14526 733 aa6.89□□□□□ -1.31
PRKD3-204ENST00000443977 GRIPAP1Q4V328 841 aa6.89□□□□□ -1.31
PRKD3-204ENST00000443977 MSS51Q4VC12 460 aa6.89□□□□□ -1.31
PRKD3-204ENST00000443977 SULF1Q8IWU6 871 aa6.89□□□□□ -1.31
PRKD3-204ENST00000443977 THAP11Q96EK4 314 aa6.89□□□□□ -1.31
PRKD3-204ENST00000443977 TRIM47Q96LD4 638 aa6.89□□□□□ -1.31
PRKD3-204ENST00000443977 REPIN1Q9BWE0 567 aaKnown RBP6.89□□□□□ -1.31
PRKD3-204ENST00000443977 DAXXQ9UER7 740 aaPredicted RBP6.89□□□□□ -1.31
PRKD3-204ENST00000443977 SALL2Q9Y467 1007 aaPredicted RBP6.89□□□□□ -1.31
PRKD3-204ENST00000443977 DDX11L8A8MPP1 907 aa6.88□□□□□ -1.31
PRKD3-204ENST00000443977 P3H3Q8IVL6 736 aa6.88□□□□□ -1.31
PRKD3-204ENST00000443977 SLC16A10Q8TF71 515 aa6.88□□□□□ -1.31
PRKD3-204ENST00000443977 SMPD1P17405 629 aa6.87□□□□□ -1.31
PRKD3-204ENST00000443977 FAM160A2Q8N612 972 aaPredicted RBP6.87□□□□□ -1.31
PRKD3-204ENST00000443977 PRDM9Q9NQV7 894 aa6.87□□□□□ -1.31
PRKD3-204ENST00000443977 SLC27A5Q9Y2P5 690 aa6.87□□□□□ -1.31
PRKD3-204ENST00000443977 TOP2AP11388 1531 aaKnown RBP6.86□□□□□ -1.31
PRKD3-204ENST00000443977 SNRPBP14678 240 aaKnown RBP6.86□□□□□ -1.31
PRKD3-204ENST00000443977 TRIM32Q13049 653 aa6.86□□□□□ -1.31
PRKD3-204ENST00000443977 Q3C1V9 767 aa6.86□□□□□ -1.31
PRKD3-204ENST00000443977 PPARGC1BQ86YN6 1023 aaKnown RBP6.86□□□□□ -1.31
PRKD3-204ENST00000443977 BRICD5Q6PL45 260 aa6.85□□□□□ -1.31
PRKD3-204ENST00000443977 EEA1Q15075 1411 aa6.84□□□□□ -1.31
PRKD3-204ENST00000443977 SMARCA4P51532 1647 aa6.84□□□□□ -1.31
PRKD3-204ENST00000443977 FECHP22830 423 aa6.84□□□□□ -1.31
PRKD3-204ENST00000443977 GCGRP47871 477 aa6.84□□□□□ -1.31
PRKD3-204ENST00000443977 MRGPRX2Q96LB1 330 aa6.84□□□□□ -1.31
PRKD3-204ENST00000443977 J3QL48 77 aa6.82□□□□□ -1.32
PRKD3-204ENST00000443977 GNPATO15228 680 aa6.82□□□□□ -1.32
PRKD3-204ENST00000443977 SMYD5Q6GMV2 418 aa6.82□□□□□ -1.32
PRKD3-204ENST00000443977 RNF19BQ6ZMZ0 732 aa6.81□□□□□ -1.32
PRKD3-204ENST00000443977 UNC13AQ9UPW8 1703 aa6.81□□□□□ -1.32
PRKD3-204ENST00000443977 MMP16P51512 607 aa6.8□□□□□ -1.32
PRKD3-204ENST00000443977 HPS1Q92902 700 aa6.8□□□□□ -1.32
PRKD3-204ENST00000443977 CCDC88BA6NC98 1476 aa6.79□□□□□ -1.32
PRKD3-204ENST00000443977 EIF4G1Q04637 1599 aaKnown RBP6.79□□□□□ -1.32
PRKD3-204ENST00000443977 SEMA3EO15041 775 aa6.79□□□□□ -1.32
PRKD3-204ENST00000443977 WNT7BP56706 349 aa6.79□□□□□ -1.32
PRKD3-204ENST00000443977 IRF7Q92985 503 aa6.79□□□□□ -1.32
PRKD3-204ENST00000443977 SMARCA2P51531 1590 aa6.78□□□□□ -1.32
PRKD3-204ENST00000443977 LCE2CQ5TA81 110 aa6.78□□□□□ -1.32
PRKD3-204ENST00000443977 NPAS3Q8IXF0 933 aa6.78□□□□□ -1.32
PRKD3-204ENST00000443977 CCDC24Q8N4L8 307 aa6.78□□□□□ -1.32
PRKD3-204ENST00000443977 ZSCAN1Q8NBB4 408 aa6.78□□□□□ -1.32
PRKD3-204ENST00000443977 NXF1Q9UBU9 619 aaKnown RBP6.78□□□□□ -1.32
PRKD3-204ENST00000443977 WRNQ14191 1432 aaPredicted RBP eCLIP6.77□□□□□ -1.33
PRKD3-204ENST00000443977 DXOO77932 396 aaKnown RBP6.77□□□□□ -1.33
PRKD3-204ENST00000443977 RC3H1Q5TC82 1133 aaKnown RBP6.77□□□□□ -1.33
PRKD3-204ENST00000443977 USB1Q9BQ65 265 aaKnown RBP6.77□□□□□ -1.33
PRKD3-204ENST00000443977 TNIKQ9UKE5 1360 aa6.77□□□□□ -1.33
PRKD3-204ENST00000443977 ALDH1A1P00352 501 aa6.76□□□□□ -1.33
PRKD3-204ENST00000443977 CCER1Q8TC90 406 aaPredicted RBP6.76□□□□□ -1.33
PRKD3-204ENST00000443977 NLRP7Q8WX94 980 aa6.76□□□□□ -1.33
PRKD3-204ENST00000443977 GMPRP36959 345 aa6.75□□□□□ -1.33
PRKD3-204ENST00000443977 PEG3Q9GZU2 1588 aa6.74□□□□□ -1.33
PRKD3-204ENST00000443977 UBTFP17480 764 aaKnown RBP6.74□□□□□ -1.33
PRKD3-204ENST00000443977 RBM26Q5T8P6 1007 aaKnown RBP6.74□□□□□ -1.33
PRKD3-204ENST00000443977 WASF2Q9Y6W5 498 aa6.74□□□□□ -1.33
PRKD3-204ENST00000443977 USP46P62068 366 aa6.73□□□□□ -1.33
PRKD3-204ENST00000443977 GOLGA3Q08378 1498 aa6.73□□□□□ -1.33
PRKD3-204ENST00000443977 CAPN5O15484 640 aaPredicted RBP6.72□□□□□ -1.33
PRKD3-204ENST00000443977 KDM4AO75164 1064 aa6.72□□□□□ -1.33
PRKD3-204ENST00000443977 EHBP1Q8NDI1 1231 aa6.72□□□□□ -1.33
PRKD3-204ENST00000443977 CEP162Q5TB80 1403 aa6.72□□□□□ -1.33
PRKD3-204ENST00000443977 ABCC8Q09428 1581 aa6.72□□□□□ -1.33
PRKD3-204ENST00000443977 TESPA1A2RU30 521 aaPredicted RBP6.71□□□□□ -1.34
PRKD3-204ENST00000443977 H3BM21 787 aa6.71□□□□□ -1.34
PRKD3-204ENST00000443977 SKOR1P84550 965 aa6.71□□□□□ -1.34
PRKD3-204ENST00000443977 GPR37O15354 613 aa6.7□□□□□ -1.34
PRKD3-204ENST00000443977 BMP1P13497 986 aa6.7□□□□□ -1.34
PRKD3-204ENST00000443977 JUNDP17535 347 aa6.7□□□□□ -1.34
PRKD3-204ENST00000443977 CEP164Q9UPV0 1460 aa6.69□□□□□ -1.34
PRKD3-204ENST00000443977 CD46P15529 392 aa6.69□□□□□ -1.34
PRKD3-204ENST00000443977 PHOX2BQ99453 314 aa6.69□□□□□ -1.34
PRKD3-204ENST00000443977 LOC100996750A0A140TA64 210 aa6.68□□□□□ -1.34
PRKD3-204ENST00000443977 VEGFBP49765 207 aa6.68□□□□□ -1.34
PRKD3-204ENST00000443977 TRIM46Q7Z4K8 759 aa6.68□□□□□ -1.34
PRKD3-204ENST00000443977 GPIHBP1Q8IV16 184 aa6.68□□□□□ -1.34
PRKD3-204ENST00000443977 KRTAP4-6Q9BYQ5 205 aa6.68□□□□□ -1.34
PRKD3-204ENST00000443977 BICRAQ9NZM4 1560 aa6.68□□□□□ -1.34
PRKD3-204ENST00000443977 SOGA1O94964 1423 aa6.67□□□□□ -1.34
PRKD3-204ENST00000443977 CENPBP07199 599 aaPredicted RBP6.67□□□□□ -1.34
PRKD3-204ENST00000443977 NUDT12Q9BQG2 462 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms