RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 MYO5BQ9ULV0 1848 aa21.44■■□□□ 1.02
PIKFYVE-206ENST00000443896 USP32Q8NFA0 1604 aa21.43■■□□□ 1.02
PIKFYVE-206ENST00000443896 SLC12A5Q9H2X9 1139 aa21.42■■□□□ 1.02
PIKFYVE-206ENST00000443896 TULP4Q9NRJ4 1543 aa21.42■■□□□ 1.02
PIKFYVE-206ENST00000443896 AGLP35573 1532 aa21.41■■□□□ 1.02
PIKFYVE-206ENST00000443896 EXOC6Q8TAG9 804 aa21.4■■□□□ 1.02
PIKFYVE-206ENST00000443896 POLR3AO14802 1390 aaPredicted RBP21.4■■□□□ 1.02
PIKFYVE-206ENST00000443896 EVC2Q86UK5 1308 aa21.4■■□□□ 1.02
PIKFYVE-206ENST00000443896 UBE2Q2Q8WVN8 375 aa21.4■■□□□ 1.02
PIKFYVE-206ENST00000443896 TSPOAP1O95153 1857 aa21.4■■□□□ 1.02
PIKFYVE-206ENST00000443896 DUSP27Q5VZP5 1158 aa21.38■■□□□ 1.01
PIKFYVE-206ENST00000443896 PPP6R1Q9UPN7 881 aa21.37■■□□□ 1.01
PIKFYVE-206ENST00000443896 GOLGA2Q08379 1002 aa21.37■■□□□ 1.01
PIKFYVE-206ENST00000443896 FBXO31Q5XUX0 539 aaPredicted RBP21.35■■□□□ 1.01
PIKFYVE-206ENST00000443896 CCDC146Q8IYE0 955 aa21.35■■□□□ 1.01
PIKFYVE-206ENST00000443896 MORC1Q86VD1 984 aa21.35■■□□□ 1.01
PIKFYVE-206ENST00000443896 ANKRD36BQ8N2N9 1353 aa21.35■■□□□ 1.01
PIKFYVE-206ENST00000443896 CGNL1Q0VF96 1302 aa21.33■■□□□ 1.01
PIKFYVE-206ENST00000443896 NGEFQ8N5V2 710 aa21.33■■□□□ 1.01
PIKFYVE-206ENST00000443896 PTPRMP28827 1452 aa21.33■■□□□ 1
PIKFYVE-206ENST00000443896 SLFN5Q08AF3 891 aa21.33■■□□□ 1
PIKFYVE-206ENST00000443896 SHPRHQ149N8 1683 aa21.32■■□□□ 1
PIKFYVE-206ENST00000443896 APAF1O14727 1248 aa21.32■■□□□ 1
PIKFYVE-206ENST00000443896 TRMT2AQ8IZ69 625 aaKnown RBP21.32■■□□□ 1
PIKFYVE-206ENST00000443896 PLIN1O60240 522 aa21.32■■□□□ 1
PIKFYVE-206ENST00000443896 NPM2Q86SE8 214 aaKnown RBP21.31■■□□□ 1
PIKFYVE-206ENST00000443896 LAS1LQ9Y4W2 734 aaKnown RBP21.31■■□□□ 1
PIKFYVE-206ENST00000443896 CLTCQ00610 1675 aaKnown RBP21.31■■□□□ 1
PIKFYVE-206ENST00000443896 NSD2O96028 1365 aa21.31■■□□□ 1
PIKFYVE-206ENST00000443896 NINLQ9Y2I6 1382 aa21.31■■□□□ 1
PIKFYVE-206ENST00000443896 YTHDC2Q9H6S0 1430 aaKnown RBP21.29■■□□□ 1
PIKFYVE-206ENST00000443896 SPATA31D1Q6ZQQ2 1576 aa21.29■■□□□ 1
PIKFYVE-206ENST00000443896 CABP2Q9NPB3 220 aa21.29■■□□□ 1
PIKFYVE-206ENST00000443896 ALKQ9UM73 1620 aa21.29■■□□□ 1
PIKFYVE-206ENST00000443896 STK26Q9P289 416 aa21.28■■□□□ 1
PIKFYVE-206ENST00000443896 SAFB2Q14151 953 aaKnown RBP eCLIP21.27■■□□□ 1
PIKFYVE-206ENST00000443896 CRBNQ96SW2 442 aa21.26■□□□□ 0.99
PIKFYVE-206ENST00000443896 ZBTB47Q9UFB7 747 aaPredicted RBP21.26■□□□□ 0.99
PIKFYVE-206ENST00000443896 TNNT2P45379 298 aaPredicted RBP21.25■□□□□ 0.99
PIKFYVE-206ENST00000443896 ARHGEF40Q8TER5 1519 aa21.25■□□□□ 0.99
PIKFYVE-206ENST00000443896 SPINK5Q9NQ38 1064 aaPredicted RBP21.25■□□□□ 0.99
PIKFYVE-206ENST00000443896 NKTRP30414 1462 aaKnown RBP21.25■□□□□ 0.99
PIKFYVE-206ENST00000443896 A2ML1A8K2U0 1454 aa21.24■□□□□ 0.99
PIKFYVE-206ENST00000443896 ATAD2Q6PL18 1390 aa21.24■□□□□ 0.99
PIKFYVE-206ENST00000443896 E9PSI1 815 aa21.24■□□□□ 0.99
PIKFYVE-206ENST00000443896 A0A1W2PP64 1363 aa21.24■□□□□ 0.99
PIKFYVE-206ENST00000443896 PRAM1Q96QH2 718 aa21.24■□□□□ 0.99
PIKFYVE-206ENST00000443896 STAG3Q9UJ98 1225 aa21.24■□□□□ 0.99
PIKFYVE-206ENST00000443896 ABCC11Q96J66 1382 aa21.23■□□□□ 0.99
PIKFYVE-206ENST00000443896 MTHFSP49914 203 aa21.23■□□□□ 0.99
PIKFYVE-206ENST00000443896 SENP3Q9H4L4 574 aaPredicted RBP21.23■□□□□ 0.99
PIKFYVE-206ENST00000443896 SRPK2P78362 688 aaKnown RBP21.23■□□□□ 0.99
PIKFYVE-206ENST00000443896 C20orf194Q5TEA3 1177 aa21.23■□□□□ 0.99
PIKFYVE-206ENST00000443896 KIF13AQ9H1H9 1805 aa21.22■□□□□ 0.99
PIKFYVE-206ENST00000443896 BRPF3Q9ULD4 1205 aa21.22■□□□□ 0.99
PIKFYVE-206ENST00000443896 IQSEC2Q5JU85 1478 aa21.21■□□□□ 0.99
PIKFYVE-206ENST00000443896 ANP32AP39687 249 aaKnown RBP21.21■□□□□ 0.99
PIKFYVE-206ENST00000443896 CFAP53Q96M91 514 aa21.21■□□□□ 0.99
PIKFYVE-206ENST00000443896 POGKQ9P215 609 aa21.21■□□□□ 0.99
PIKFYVE-206ENST00000443896 RUNDC1Q96C34 613 aa21.2■□□□□ 0.98
PIKFYVE-206ENST00000443896 MINK1Q8N4C8 1332 aaPredicted RBP21.2■□□□□ 0.98
PIKFYVE-206ENST00000443896 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.2■□□□□ 0.98
PIKFYVE-206ENST00000443896 WWC1Q8IX03 1113 aa21.19■□□□□ 0.98
PIKFYVE-206ENST00000443896 DMRT2Q9Y5R5 561 aa21.19■□□□□ 0.98
PIKFYVE-206ENST00000443896 DLC1Q96QB1 1528 aa21.19■□□□□ 0.98
PIKFYVE-206ENST00000443896 CD163L1Q9NR16 1453 aa21.19■□□□□ 0.98
PIKFYVE-206ENST00000443896 RIMS2Q9UQ26 1411 aa21.19■□□□□ 0.98
PIKFYVE-206ENST00000443896 SETD1AO15047 1707 aaKnown RBP21.18■□□□□ 0.98
PIKFYVE-206ENST00000443896 TCERG1O14776 1098 aaKnown RBP21.17■□□□□ 0.98
PIKFYVE-206ENST00000443896 MED14O60244 1454 aa21.16■□□□□ 0.98
PIKFYVE-206ENST00000443896 NEFMP07197 916 aa21.16■□□□□ 0.98
PIKFYVE-206ENST00000443896 TERF2IPQ9NYB0 399 aa21.16■□□□□ 0.98
PIKFYVE-206ENST00000443896 MLECQ14165 292 aa21.16■□□□□ 0.98
PIKFYVE-206ENST00000443896 ANKRD26Q9UPS8 1709 aa21.16■□□□□ 0.98
PIKFYVE-206ENST00000443896 PHF23Q9BUL5 403 aaPredicted RBP21.16■□□□□ 0.98
PIKFYVE-206ENST00000443896 IPO9Q96P70 1041 aaKnown RBP21.15■□□□□ 0.98
PIKFYVE-206ENST00000443896 NLRP1Q9C000 1473 aa21.14■□□□□ 0.98
PIKFYVE-206ENST00000443896 TCP11L2Q8N4U5 519 aa21.14■□□□□ 0.97
PIKFYVE-206ENST00000443896 CDK19Q9BWU1 502 aa21.13■□□□□ 0.97
PIKFYVE-206ENST00000443896 NCBP3Q53F19 620 aaKnown RBP21.13■□□□□ 0.97
PIKFYVE-206ENST00000443896 CCDC27Q2M243 656 aa21.12■□□□□ 0.97
PIKFYVE-206ENST00000443896 ZMYM3Q14202 1370 aa21.11■□□□□ 0.97
PIKFYVE-206ENST00000443896 NRXN3Q9Y4C0 1643 aa21.11■□□□□ 0.97
PIKFYVE-206ENST00000443896 FYB1O15117 783 aa21.11■□□□□ 0.97
PIKFYVE-206ENST00000443896 MS4A1P11836 297 aa21.11■□□□□ 0.97
PIKFYVE-206ENST00000443896 GGNBP2Q9H3C7 697 aa21.11■□□□□ 0.97
PIKFYVE-206ENST00000443896 KDM2BQ8NHM5 1336 aa21.11■□□□□ 0.97
PIKFYVE-206ENST00000443896 WDR63Q8IWG1 891 aa21.1■□□□□ 0.97
PIKFYVE-206ENST00000443896 ADGRB2O60241 1585 aa21.1■□□□□ 0.97
PIKFYVE-206ENST00000443896 COL3A1P02461 1466 aaPredicted RBP21.1■□□□□ 0.97
PIKFYVE-206ENST00000443896 BCAR3O75815 825 aa21.09■□□□□ 0.97
PIKFYVE-206ENST00000443896 HDGFL2Q7Z4V5 671 aaPredicted RBP21.09■□□□□ 0.97
PIKFYVE-206ENST00000443896 RRP7AQ9Y3A4 280 aaKnown RBP21.09■□□□□ 0.97
PIKFYVE-206ENST00000443896 NEUROD2Q15784 382 aa21.08■□□□□ 0.97
PIKFYVE-206ENST00000443896 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.08■□□□□ 0.97
PIKFYVE-206ENST00000443896 U2AF1L5P0DN76 240 aaPredicted RBP21.07■□□□□ 0.96
PIKFYVE-206ENST00000443896 U2AF1Q01081 240 aaKnown RBP eCLIP21.07■□□□□ 0.963e-7■■■■□ 21.6
PIKFYVE-206ENST00000443896 ESF1Q9H501 851 aaKnown RBP21.07■□□□□ 0.96
PIKFYVE-206ENST00000443896 CABP1Q9NZU7 370 aa21.07■□□□□ 0.96
PIKFYVE-206ENST00000443896 WAPLQ7Z5K2 1190 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms