RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 ABCC11Q96J66 1382 aa14.95□□□□□ -0.02
HLA-DQB1-206ENST00000443574 TRPM1Q7Z4N2 1603 aa14.92□□□□□ -0.02
HLA-DQB1-206ENST00000443574 FMN2Q9NZ56 1722 aa14.92□□□□□ -0.02
HLA-DQB1-206ENST00000443574 CFAP70Q5T0N1 1121 aa14.92□□□□□ -0.02
HLA-DQB1-206ENST00000443574 NHSL1Q5SYE7 1610 aa14.92□□□□□ -0.02
HLA-DQB1-206ENST00000443574 TMEM132EQ6IEE7 984 aa14.91□□□□□ -0.02
HLA-DQB1-206ENST00000443574 SLAIN2Q9P270 581 aa14.91□□□□□ -0.02
HLA-DQB1-206ENST00000443574 STK26Q9P289 416 aa14.91□□□□□ -0.02
HLA-DQB1-206ENST00000443574 AHDC1Q5TGY3 1603 aaPredicted RBP14.91□□□□□ -0.02
HLA-DQB1-206ENST00000443574 ADGRB2O60241 1585 aa14.9□□□□□ -0.02
HLA-DQB1-206ENST00000443574 TONSLQ96HA7 1378 aa14.9□□□□□ -0.02
HLA-DQB1-206ENST00000443574 PCGF6Q9BYE7 350 aa14.9□□□□□ -0.02
HLA-DQB1-206ENST00000443574 MST1RQ04912 1400 aa14.9□□□□□ -0.02
HLA-DQB1-206ENST00000443574 HSPA1LP34931 641 aa14.89□□□□□ -0.03
HLA-DQB1-206ENST00000443574 NEUROD1Q13562 356 aa14.89□□□□□ -0.03
HLA-DQB1-206ENST00000443574 KIF1AQ12756 1690 aa14.88□□□□□ -0.03
HLA-DQB1-206ENST00000443574 SIN3AQ96ST3 1273 aa14.88□□□□□ -0.03
HLA-DQB1-206ENST00000443574 COL16A1Q07092 1604 aaPredicted RBP14.88□□□□□ -0.03
HLA-DQB1-206ENST00000443574 ITSN1Q15811 1721 aa14.87□□□□□ -0.03
HLA-DQB1-206ENST00000443574 SIRT1Q96EB6 747 aa14.87□□□□□ -0.03
HLA-DQB1-206ENST00000443574 L3MBTL2Q969R5 705 aa14.86□□□□□ -0.03
HLA-DQB1-206ENST00000443574 SHPRHQ149N8 1683 aa14.85□□□□□ -0.03
HLA-DQB1-206ENST00000443574 QRICH2Q9H0J4 1663 aa14.85□□□□□ -0.03
HLA-DQB1-206ENST00000443574 POGKQ9P215 609 aa14.85□□□□□ -0.03
HLA-DQB1-206ENST00000443574 RGPD8O14715 1765 aaPredicted RBP14.85□□□□□ -0.03
HLA-DQB1-206ENST00000443574 C1orf167Q5SNV9 1468 aa14.84□□□□□ -0.03
HLA-DQB1-206ENST00000443574 CLSPNQ9HAW4 1339 aa14.84□□□□□ -0.03
HLA-DQB1-206ENST00000443574 EIF3AQ14152 1382 aaKnown RBP14.84□□□□□ -0.03
HLA-DQB1-206ENST00000443574 PLEKHH1Q9ULM0 1364 aa14.84□□□□□ -0.03
HLA-DQB1-206ENST00000443574 MED1Q15648 1581 aaPredicted RBP14.83□□□□□ -0.04
HLA-DQB1-206ENST00000443574 WAPLQ7Z5K2 1190 aa14.83□□□□□ -0.04
HLA-DQB1-206ENST00000443574 PRAM1Q96QH2 718 aa14.83□□□□□ -0.04
HLA-DQB1-206ENST00000443574 TRAK1Q9UPV9 953 aa14.82□□□□□ -0.04
HLA-DQB1-206ENST00000443574 BRINP3Q76B58 766 aa14.81□□□□□ -0.04
HLA-DQB1-206ENST00000443574 ROCK2O75116 1388 aaKnown RBP14.8□□□□□ -0.04
HLA-DQB1-206ENST00000443574 SAFB2Q14151 953 aaKnown RBP eCLIP14.79□□□□□ -0.04
HLA-DQB1-206ENST00000443574 ANKARQ7Z5J8 1434 aa14.79□□□□□ -0.04
HLA-DQB1-206ENST00000443574 RALGAPBQ86X10 1494 aa14.79□□□□□ -0.04
HLA-DQB1-206ENST00000443574 TULP4Q9NRJ4 1543 aa14.79□□□□□ -0.04
HLA-DQB1-206ENST00000443574 JCADQ9P266 1359 aa14.79□□□□□ -0.04
HLA-DQB1-206ENST00000443574 USP32Q8NFA0 1604 aa14.78□□□□□ -0.04
HLA-DQB1-206ENST00000443574 TOPAZ1Q8N9V7 1692 aa14.76□□□□□ -0.05
HLA-DQB1-206ENST00000443574 NPHP3Q7Z494 1330 aa14.75□□□□□ -0.05
HLA-DQB1-206ENST00000443574 MINK1Q8N4C8 1332 aaPredicted RBP14.75□□□□□ -0.05
HLA-DQB1-206ENST00000443574 ESCO1Q5FWF5 840 aa14.75□□□□□ -0.05
HLA-DQB1-206ENST00000443574 CCER1Q8TC90 406 aaPredicted RBP14.75□□□□□ -0.05
HLA-DQB1-206ENST00000443574 DISP3Q9P2K9 1392 aa14.74□□□□□ -0.05
HLA-DQB1-206ENST00000443574 CENPJQ9HC77 1338 aaPredicted RBP14.74□□□□□ -0.05
HLA-DQB1-206ENST00000443574 NBPF1Q3BBV0 1214 aa14.74□□□□□ -0.05
HLA-DQB1-206ENST00000443574 GPRASP1Q5JY77 1395 aa14.73□□□□□ -0.05
HLA-DQB1-206ENST00000443574 NUTM2FA1L443 756 aa14.73□□□□□ -0.05
HLA-DQB1-206ENST00000443574 ORAI2Q96SN7 254 aa14.73□□□□□ -0.05
HLA-DQB1-206ENST00000443574 TIMELESSQ9UNS1 1208 aa14.73□□□□□ -0.05
HLA-DQB1-206ENST00000443574 COL22A1Q8NFW1 1626 aaPredicted RBP14.73□□□□□ -0.05
HLA-DQB1-206ENST00000443574 SPATA31A6Q5VVP1 1343 aa14.72□□□□□ -0.05
HLA-DQB1-206ENST00000443574 ATP7BP35670 1465 aa14.72□□□□□ -0.05
HLA-DQB1-206ENST00000443574 LRRC59Q96AG4 307 aaKnown RBP14.72□□□□□ -0.05
HLA-DQB1-206ENST00000443574 HIRIP3Q9BW71 556 aaPredicted RBP14.72□□□□□ -0.05
HLA-DQB1-206ENST00000443574 PXDNQ92626 1479 aa14.71□□□□□ -0.05
HLA-DQB1-206ENST00000443574 WASLO00401 505 aaPredicted RBP14.71□□□□□ -0.05
HLA-DQB1-206ENST00000443574 MARF1Q9Y4F3 1742 aaKnown RBP14.69□□□□□ -0.06
HLA-DQB1-206ENST00000443574 SOS2Q07890 1332 aaPredicted RBP14.69□□□□□ -0.06
HLA-DQB1-206ENST00000443574 NBPF8Q3BBV2 869 aa14.69□□□□□ -0.06
HLA-DQB1-206ENST00000443574 CARD11Q9BXL7 1154 aa14.69□□□□□ -0.06
HLA-DQB1-206ENST00000443574 PHF8Q9UPP1 1060 aa14.69□□□□□ -0.06
HLA-DQB1-206ENST00000443574 TRPM3Q9HCF6 1732 aaPredicted RBP14.68□□□□□ -0.06
HLA-DQB1-206ENST00000443574 PNPLA6Q8IY17 1366 aa14.67□□□□□ -0.06
HLA-DQB1-206ENST00000443574 SBNO2Q9Y2G9 1366 aa14.67□□□□□ -0.06
HLA-DQB1-206ENST00000443574 ABCA3Q99758 1704 aa14.66□□□□□ -0.06
HLA-DQB1-206ENST00000443574 FOXO3O43524 673 aa14.66□□□□□ -0.06
HLA-DQB1-206ENST00000443574 DDX17Q92841 729 aaKnown RBP14.66□□□□□ -0.06
HLA-DQB1-206ENST00000443574 TNS3Q68CZ2 1445 aa14.66□□□□□ -0.06
HLA-DQB1-206ENST00000443574 SRPK2P78362 688 aaKnown RBP14.65□□□□□ -0.06
HLA-DQB1-206ENST00000443574 PSME1Q06323 249 aa14.65□□□□□ -0.06
HLA-DQB1-206ENST00000443574 MEX3CQ5U5Q3 659 aaKnown RBP14.65□□□□□ -0.06
HLA-DQB1-206ENST00000443574 LRP6O75581 1613 aa14.65□□□□□ -0.06
HLA-DQB1-206ENST00000443574 EVC2Q86UK5 1308 aa14.65□□□□□ -0.06
HLA-DQB1-206ENST00000443574 ALS2Q96Q42 1657 aa14.65□□□□□ -0.06
HLA-DQB1-206ENST00000443574 CDK19Q9BWU1 502 aa14.64□□□□□ -0.07
HLA-DQB1-206ENST00000443574 PRR36Q9H6K5 1346 aa14.64□□□□□ -0.07
HLA-DQB1-206ENST00000443574 NUDT16Q96DE0 195 aaKnown RBP14.63□□□□□ -0.07
HLA-DQB1-206ENST00000443574 AKAP12Q02952 1782 aa14.62□□□□□ -0.07
HLA-DQB1-206ENST00000443574 SBNO1A3KN83 1393 aa14.62□□□□□ -0.07
HLA-DQB1-206ENST00000443574 ARHGEF10O15013 1369 aa14.62□□□□□ -0.07
HLA-DQB1-206ENST00000443574 PPIP5K1Q6PFW1 1433 aa14.62□□□□□ -0.07
HLA-DQB1-206ENST00000443574 NGDNQ8NEJ9 315 aaKnown RBP14.62□□□□□ -0.07
HLA-DQB1-206ENST00000443574 PMFBP1Q8TBY8 1022 aa14.62□□□□□ -0.07
HLA-DQB1-206ENST00000443574 DCAF8L1A6NGE4 600 aa14.61□□□□□ -0.07
HLA-DQB1-206ENST00000443574 SLC24A1O60721 1099 aa14.61□□□□□ -0.07
HLA-DQB1-206ENST00000443574 XPCQ01831 940 aaPredicted RBP14.61□□□□□ -0.07
HLA-DQB1-206ENST00000443574 KRT28Q7Z3Y7 464 aa14.61□□□□□ -0.07
HLA-DQB1-206ENST00000443574 CCDC61Q9Y6R9 512 aa14.61□□□□□ -0.07
HLA-DQB1-206ENST00000443574 ATAD2Q6PL18 1390 aa14.6□□□□□ -0.07
HLA-DQB1-206ENST00000443574 NUTM2BA6NNL0 878 aaPredicted RBP14.6□□□□□ -0.07
HLA-DQB1-206ENST00000443574 NUTM2EB1AL46 878 aaPredicted RBP14.6□□□□□ -0.07
HLA-DQB1-206ENST00000443574 NUTM2AQ8IVF1 878 aaPredicted RBP14.6□□□□□ -0.07
HLA-DQB1-206ENST00000443574 SPATA31A3Q5VYP0 1347 aa14.6□□□□□ -0.07
HLA-DQB1-206ENST00000443574 USP47Q96K76 1375 aa14.6□□□□□ -0.07
HLA-DQB1-206ENST00000443574 CRYBG1Q9Y4K1 1723 aa14.59□□□□□ -0.07
HLA-DQB1-206ENST00000443574 POLR3AO14802 1390 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms