RNA–Protein interactions for RNA: ENST00000443430.2

POLR2J3-202, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-202ENST00000443430 ATRNO75882 1429 aa31.45■■■□□ 2.63
POLR2J3-202ENST00000443430 PPLO60437 1756 aa31.43■■■□□ 2.62
POLR2J3-202ENST00000443430 MYOM2P54296 1465 aa31.41■■■□□ 2.62
POLR2J3-202ENST00000443430 RRBP1Q9P2E9 1410 aaKnown RBP31.41■■■□□ 2.62
POLR2J3-202ENST00000443430 NPHP3Q7Z494 1330 aa31.4■■■□□ 2.62
POLR2J3-202ENST00000443430 ESCO1Q5FWF5 840 aa31.39■■■□□ 2.62
POLR2J3-202ENST00000443430 CDC42BPGQ6DT37 1551 aa31.38■■■□□ 2.61
POLR2J3-202ENST00000443430 BCL9LQ86UU0 1499 aa31.37■■■□□ 2.61
POLR2J3-202ENST00000443430 PXDNQ92626 1479 aa31.37■■■□□ 2.61
POLR2J3-202ENST00000443430 EP400Q96L91 3159 aa31.35■■■□□ 2.61
POLR2J3-202ENST00000443430 SLC4A1APQ9BWU0 796 aaKnown RBP31.35■■■□□ 2.61
POLR2J3-202ENST00000443430 MARF1Q9Y4F3 1742 aaKnown RBP31.35■■■□□ 2.61
POLR2J3-202ENST00000443430 FOXO3O43524 673 aa31.34■■■□□ 2.61
POLR2J3-202ENST00000443430 XPCQ01831 940 aaPredicted RBP31.33■■■□□ 2.61
POLR2J3-202ENST00000443430 ZRANB1Q9UGI0 708 aa31.3■■■□□ 2.6
POLR2J3-202ENST00000443430 FOXD1Q16676 465 aa31.29■■■□□ 2.6
POLR2J3-202ENST00000443430 CCDC125Q86Z20 511 aa31.29■■■□□ 2.6
POLR2J3-202ENST00000443430 GJD4Q96KN9 370 aaPredicted RBP31.29■■■□□ 2.6
POLR2J3-202ENST00000443430 ADGRF5Q8IZF2 1346 aa31.28■■■□□ 2.6
POLR2J3-202ENST00000443430 NUTM2FA1L443 756 aa31.27■■■□□ 2.6
POLR2J3-202ENST00000443430 WAPLQ7Z5K2 1190 aa31.27■■■□□ 2.6
POLR2J3-202ENST00000443430 LRPPRCP42704 1394 aaKnown RBP31.27■■■□□ 2.6
POLR2J3-202ENST00000443430 STK26Q9P289 416 aa31.26■■■□□ 2.59
POLR2J3-202ENST00000443430 TECPR2O15040 1411 aa31.25■■■□□ 2.59
POLR2J3-202ENST00000443430 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.22■■■□□ 2.59
POLR2J3-202ENST00000443430 ABCC11Q96J66 1382 aa31.2■■■□□ 2.59
POLR2J3-202ENST00000443430 PLEKHH1Q9ULM0 1364 aa31.2■■■□□ 2.59
POLR2J3-202ENST00000443430 RGL3Q3MIN7 710 aa31.19■■■□□ 2.58
POLR2J3-202ENST00000443430 UNC5CLQ8IV45 518 aa31.19■■■□□ 2.58
POLR2J3-202ENST00000443430 SPATA31A3Q5VYP0 1347 aa31.19■■■□□ 2.58
POLR2J3-202ENST00000443430 SLIT2O94813 1529 aa31.19■■■□□ 2.58
POLR2J3-202ENST00000443430 TMEM132EQ6IEE7 984 aa31.18■■■□□ 2.58
POLR2J3-202ENST00000443430 GLI3P10071 1580 aa31.17■■■□□ 2.58
POLR2J3-202ENST00000443430 SPATA31E1Q6ZUB1 1445 aa31.17■■■□□ 2.58
POLR2J3-202ENST00000443430 RALGAPBQ86X10 1494 aa31.17■■■□□ 2.58
POLR2J3-202ENST00000443430 KNDC1Q76NI1 1749 aa31.17■■■□□ 2.58
POLR2J3-202ENST00000443430 CCDC144AA2RUR9 1427 aa31.16■■■□□ 2.58
POLR2J3-202ENST00000443430 FMN2Q9NZ56 1722 aa31.16■■■□□ 2.58
POLR2J3-202ENST00000443430 IFT172Q9UG01 1749 aa31.16■■■□□ 2.58
POLR2J3-202ENST00000443430 ANKRD30BQ9BXX2 1392 aa31.16■■■□□ 2.58
POLR2J3-202ENST00000443430 KIF1AQ12756 1690 aa31.13■■■□□ 2.57
POLR2J3-202ENST00000443430 KRT28Q7Z3Y7 464 aa31.12■■■□□ 2.57
POLR2J3-202ENST00000443430 PIK3C2GO75747 1445 aa31.11■■■□□ 2.57
POLR2J3-202ENST00000443430 BLMP54132 1417 aaPredicted RBP31.11■■■□□ 2.57
POLR2J3-202ENST00000443430 USP32Q8NFA0 1604 aa31.11■■■□□ 2.57
POLR2J3-202ENST00000443430 BRWD3Q6RI45 1802 aa31.1■■■□□ 2.57
POLR2J3-202ENST00000443430 YTHDC2Q9H6S0 1430 aaKnown RBP31.09■■■□□ 2.57
POLR2J3-202ENST00000443430 RGPD8O14715 1765 aaPredicted RBP31.07■■■□□ 2.56
POLR2J3-202ENST00000443430 SIRT1Q96EB6 747 aa31.07■■■□□ 2.56
POLR2J3-202ENST00000443430 DEFB132Q7Z7B7 95 aa31.05■■■□□ 2.56
POLR2J3-202ENST00000443430 MPHOSPH9Q99550 1183 aa31.05■■■□□ 2.56
POLR2J3-202ENST00000443430 SEPT12Q8IYM1 358 aa31.04■■■□□ 2.56
POLR2J3-202ENST00000443430 PHF8Q9UPP1 1060 aa31.04■■■□□ 2.56
POLR2J3-202ENST00000443430 TNS3Q68CZ2 1445 aa31.04■■■□□ 2.56
POLR2J3-202ENST00000443430 VPS72Q15906 364 aa31.03■■■□□ 2.56
POLR2J3-202ENST00000443430 CABLES1Q8TDN4 633 aa31.03■■■□□ 2.56
POLR2J3-202ENST00000443430 HAP1P54257 671 aaPredicted RBP31.02■■■□□ 2.56
POLR2J3-202ENST00000443430 PSME1Q06323 249 aa31.01■■■□□ 2.55
POLR2J3-202ENST00000443430 ONECUT3O60422 494 aaPredicted RBP31■■■□□ 2.55
POLR2J3-202ENST00000443430 C14orf93Q9H972 538 aaKnown RBP31■■■□□ 2.55
POLR2J3-202ENST00000443430 NWD2Q9ULI1 1742 aa30.98■■■□□ 2.55
POLR2J3-202ENST00000443430 PLCH1Q4KWH8 1693 aa30.98■■■□□ 2.55
POLR2J3-202ENST00000443430 SBNO1A3KN83 1393 aa30.98■■■□□ 2.55
POLR2J3-202ENST00000443430 PLEKHG5O94827 1062 aa30.98■■■□□ 2.55
POLR2J3-202ENST00000443430 SF3B2Q13435 895 aaKnown RBP30.97■■■□□ 2.55
POLR2J3-202ENST00000443430 NRXN1Q9ULB1 1477 aa30.96■■■□□ 2.55
POLR2J3-202ENST00000443430 CCDC9Q9Y3X0 531 aaKnown RBP30.95■■■□□ 2.55
POLR2J3-202ENST00000443430 ABCA3Q99758 1704 aa30.95■■■□□ 2.54
POLR2J3-202ENST00000443430 CFAP70Q5T0N1 1121 aa30.94■■■□□ 2.54
POLR2J3-202ENST00000443430 LMOD2Q6P5Q4 547 aa30.94■■■□□ 2.54
POLR2J3-202ENST00000443430 KRT27Q7Z3Y8 459 aa30.94■■■□□ 2.54
POLR2J3-202ENST00000443430 DHX57Q6P158 1386 aaKnown RBP30.93■■■□□ 2.54
POLR2J3-202ENST00000443430 ARHGEF10O15013 1369 aa30.92■■■□□ 2.54
POLR2J3-202ENST00000443430 FAM83GA6ND36 823 aa30.92■■■□□ 2.54
POLR2J3-202ENST00000443430 SAFB2Q14151 953 aaKnown RBP eCLIP30.91■■■□□ 2.54
POLR2J3-202ENST00000443430 PRAM1Q96QH2 718 aa30.91■■■□□ 2.54
POLR2J3-202ENST00000443430 PMFBP1Q8TBY8 1022 aa30.88■■■□□ 2.53
POLR2J3-202ENST00000443430 ANKARQ7Z5J8 1434 aa30.85■■■□□ 2.53
POLR2J3-202ENST00000443430 LRP5O75197 1615 aa30.84■■■□□ 2.53
POLR2J3-202ENST00000443430 NRAPQ86VF7 1730 aa30.84■■■□□ 2.53
POLR2J3-202ENST00000443430 DLC1Q96QB1 1528 aa30.83■■■□□ 2.53
POLR2J3-202ENST00000443430 POGKQ9P215 609 aa30.83■■■□□ 2.53
POLR2J3-202ENST00000443430 A0A0G2JS52 829 aa30.82■■■□□ 2.52
POLR2J3-202ENST00000443430 MYT1Q01538 1121 aa30.82■■■□□ 2.52
POLR2J3-202ENST00000443430 TRPM3Q9HCF6 1732 aaPredicted RBP30.81■■■□□ 2.52
POLR2J3-202ENST00000443430 FAM98CQ17RN3 349 aaKnown RBP30.81■■■□□ 2.52
POLR2J3-202ENST00000443430 BAG6P46379 1132 aa30.8■■■□□ 2.52
POLR2J3-202ENST00000443430 BTG4Q9NY30 223 aa30.8■■■□□ 2.52
POLR2J3-202ENST00000443430 ADGRB2O60241 1585 aa30.79■■■□□ 2.52
POLR2J3-202ENST00000443430 PSDA5PKW4 1024 aaPredicted RBP30.78■■■□□ 2.52
POLR2J3-202ENST00000443430 ALS2Q96Q42 1657 aa30.77■■■□□ 2.52
POLR2J3-202ENST00000443430 COL14A1Q05707 1796 aaKnown RBP30.76■■■□□ 2.51
POLR2J3-202ENST00000443430 HIRIP3Q9BW71 556 aaPredicted RBP30.75■■■□□ 2.51
POLR2J3-202ENST00000443430 ADGRB1O14514 1584 aa30.75■■■□□ 2.51
POLR2J3-202ENST00000443430 HRCP23327 699 aa30.74■■■□□ 2.51
POLR2J3-202ENST00000443430 GPRASP1Q5JY77 1395 aa30.74■■■□□ 2.51
POLR2J3-202ENST00000443430 PRR36Q9H6K5 1346 aa30.73■■■□□ 2.51
POLR2J3-202ENST00000443430 TRAK1Q9UPV9 953 aa30.73■■■□□ 2.51
POLR2J3-202ENST00000443430 ACIN1Q9UKV3 1341 aaKnown RBP30.73■■■□□ 2.51
POLR2J3-202ENST00000443430 EN1Q05925 392 aaPredicted RBP30.71■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms