RNA–Protein interactions for RNA: ENST00000443128.6

CCDC113-202, Transcript of coiled-coil domain containing 113, humanhuman

TSL 2 BASIC

Gene CCDC113, Length 5,110 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-202ENST00000443128 AEBP2Q6ZN18 517 aaPredicted RBP10.95□□□□□ -0.66
CCDC113-202ENST00000443128 HDAC5Q9UQL6 1122 aa10.95□□□□□ -0.66
CCDC113-202ENST00000443128 CHMP3Q9Y3E7 222 aa10.94□□□□□ -0.66
CCDC113-202ENST00000443128 ABCC10Q5T3U5 1492 aa10.94□□□□□ -0.66
CCDC113-202ENST00000443128 MFAP1P55081 439 aaKnown RBP10.94□□□□□ -0.66
CCDC113-202ENST00000443128 C14orf93Q9H972 538 aaKnown RBP10.94□□□□□ -0.66
CCDC113-202ENST00000443128 DDX19BQ9UMR2 479 aa10.94□□□□□ -0.66
CCDC113-202ENST00000443128 NUDT16Q96DE0 195 aaKnown RBP10.94□□□□□ -0.66
CCDC113-202ENST00000443128 TSPYL4Q9UJ04 414 aa10.94□□□□□ -0.66
CCDC113-202ENST00000443128 TPRNQ4KMQ1 711 aa10.93□□□□□ -0.66
CCDC113-202ENST00000443128 CCDC61Q9Y6R9 512 aa10.93□□□□□ -0.66
CCDC113-202ENST00000443128 DISP3Q9P2K9 1392 aa10.93□□□□□ -0.66
CCDC113-202ENST00000443128 TEX14Q8IWB6 1497 aa10.93□□□□□ -0.66
CCDC113-202ENST00000443128 PANK1Q8TE04 598 aa10.92□□□□□ -0.66
CCDC113-202ENST00000443128 API5Q9BZZ5 524 aaKnown RBP10.92□□□□□ -0.66
CCDC113-202ENST00000443128 KIF16BQ96L93 1317 aa10.92□□□□□ -0.66
CCDC113-202ENST00000443128 TTC5Q8N0Z6 440 aa10.92□□□□□ -0.66
CCDC113-202ENST00000443128 MBD5Q9P267 1494 aa10.92□□□□□ -0.66
CCDC113-202ENST00000443128 TRIM6-TRIM34B2RNG4 842 aa10.92□□□□□ -0.66
CCDC113-202ENST00000443128 ANKRD45Q5TZF3 282 aa10.92□□□□□ -0.66
CCDC113-202ENST00000443128 RAPGEF4Q8WZA2 1011 aa10.92□□□□□ -0.66
CCDC113-202ENST00000443128 NLRP2Q9NX02 1062 aa10.92□□□□□ -0.66
CCDC113-202ENST00000443128 RALGAPBQ86X10 1494 aa10.92□□□□□ -0.66
CCDC113-202ENST00000443128 KIAA1211Q6ZU35 1233 aa10.91□□□□□ -0.66
CCDC113-202ENST00000443128 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.91□□□□□ -0.66
CCDC113-202ENST00000443128 RRS1Q15050 365 aaKnown RBP10.91□□□□□ -0.66
CCDC113-202ENST00000443128 PZPP20742 1482 aa10.91□□□□□ -0.66
CCDC113-202ENST00000443128 NAP1L2Q9ULW6 460 aaPredicted RBP10.91□□□□□ -0.66
CCDC113-202ENST00000443128 PRAG1Q86YV5 1406 aa10.9□□□□□ -0.66
CCDC113-202ENST00000443128 SULT6B1Q6IMI4 303 aa10.9□□□□□ -0.66
CCDC113-202ENST00000443128 ADGRL2O95490 1459 aa10.9□□□□□ -0.66
CCDC113-202ENST00000443128 PDE4AP27815 886 aa10.9□□□□□ -0.66
CCDC113-202ENST00000443128 FKBP5Q13451 457 aaPredicted RBP10.9□□□□□ -0.66
CCDC113-202ENST00000443128 TAOK2Q9UL54 1235 aa10.9□□□□□ -0.66
CCDC113-202ENST00000443128 EXOSC9Q06265 439 aaKnown RBP10.9□□□□□ -0.67
CCDC113-202ENST00000443128 TSR2Q969E8 191 aaKnown RBP10.89□□□□□ -0.67
CCDC113-202ENST00000443128 TAF7LQ5H9L4 462 aa10.89□□□□□ -0.67
CCDC113-202ENST00000443128 GPATCH3Q96I76 525 aa10.89□□□□□ -0.67
CCDC113-202ENST00000443128 FAM161AQ3B820 660 aa10.88□□□□□ -0.67
CCDC113-202ENST00000443128 GAS2L2Q8NHY3 880 aa10.88□□□□□ -0.67
CCDC113-202ENST00000443128 IPO9Q96P70 1041 aaKnown RBP10.88□□□□□ -0.67
CCDC113-202ENST00000443128 SLKQ9H2G2 1235 aaPredicted RBP10.88□□□□□ -0.67
CCDC113-202ENST00000443128 AMOTL2Q9Y2J4 779 aa10.88□□□□□ -0.67
CCDC113-202ENST00000443128 GORABQ5T7V8 394 aa10.87□□□□□ -0.67
CCDC113-202ENST00000443128 UHRF1BP1LA0JNW5 1464 aa10.87□□□□□ -0.67
CCDC113-202ENST00000443128 TNRQ92752 1358 aa10.87□□□□□ -0.67
CCDC113-202ENST00000443128 WASLO00401 505 aaPredicted RBP10.87□□□□□ -0.67
CCDC113-202ENST00000443128 SMG6Q86US8 1419 aaKnown RBP10.87□□□□□ -0.67
CCDC113-202ENST00000443128 BCAR3O75815 825 aa10.87□□□□□ -0.67
CCDC113-202ENST00000443128 NEXNQ0ZGT2 675 aa10.86□□□□□ -0.67
CCDC113-202ENST00000443128 C9orf78Q9NZ63 289 aaPredicted RBP10.86□□□□□ -0.67
CCDC113-202ENST00000443128 WDR63Q8IWG1 891 aa10.86□□□□□ -0.67
CCDC113-202ENST00000443128 XPCQ01831 940 aaPredicted RBP10.86□□□□□ -0.67
CCDC113-202ENST00000443128 NME9Q86XW9 330 aa10.85□□□□□ -0.67
CCDC113-202ENST00000443128 SYTL4Q96C24 671 aaPredicted RBP10.85□□□□□ -0.67
CCDC113-202ENST00000443128 ATP7AQ04656 1500 aa10.85□□□□□ -0.67
CCDC113-202ENST00000443128 TWISTNBQ3B726 338 aaPredicted RBP10.85□□□□□ -0.67
CCDC113-202ENST00000443128 FCHSD2O94868 740 aa10.84□□□□□ -0.67
CCDC113-202ENST00000443128 KDM6BO15054 1643 aa10.84□□□□□ -0.67
CCDC113-202ENST00000443128 DDX58O95786 925 aaKnown RBP10.84□□□□□ -0.67
CCDC113-202ENST00000443128 PLEKHO1Q53GL0 409 aaPredicted RBP10.84□□□□□ -0.67
CCDC113-202ENST00000443128 WWC1Q8IX03 1113 aa10.84□□□□□ -0.67
CCDC113-202ENST00000443128 RBM33Q96EV2 1170 aaKnown RBP10.84□□□□□ -0.67
CCDC113-202ENST00000443128 TTC37Q6PGP7 1564 aa10.84□□□□□ -0.67
CCDC113-202ENST00000443128 ARHGEF12Q9NZN5 1544 aa10.83□□□□□ -0.68
CCDC113-202ENST00000443128 AAMPQ13685 434 aa10.83□□□□□ -0.68
CCDC113-202ENST00000443128 RILPL2Q969X0 211 aa10.83□□□□□ -0.68
CCDC113-202ENST00000443128 CFAP65Q6ZU64 1925 aaKnown RBP10.83□□□□□ -0.68
CCDC113-202ENST00000443128 TMPOP42166 694 aaKnown RBP10.82□□□□□ -0.68
CCDC113-202ENST00000443128 TRIM44Q96DX7 344 aaPredicted RBP10.82□□□□□ -0.68
CCDC113-202ENST00000443128 USP35Q9P2H5 1018 aa10.82□□□□□ -0.68
CCDC113-202ENST00000443128 MAST1Q9Y2H9 1570 aa10.82□□□□□ -0.68
CCDC113-202ENST00000443128 SLFN5Q08AF3 891 aa10.82□□□□□ -0.68
CCDC113-202ENST00000443128 PDE3AQ14432 1141 aa10.82□□□□□ -0.68
CCDC113-202ENST00000443128 ZRSR1Q15695 479 aaKnown RBP10.82□□□□□ -0.68
CCDC113-202ENST00000443128 LNPKQ9C0E8 428 aa10.82□□□□□ -0.68
CCDC113-202ENST00000443128 NOB1Q9ULX3 412 aaKnown RBP10.82□□□□□ -0.68
CCDC113-202ENST00000443128 EMILIN1Q9Y6C2 1016 aa10.82□□□□□ -0.68
CCDC113-202ENST00000443128 GTF2E1P29083 439 aaPredicted RBP10.81□□□□□ -0.68
CCDC113-202ENST00000443128 TESK2Q96S53 571 aa10.81□□□□□ -0.68
CCDC113-202ENST00000443128 AIMP1Q12904 312 aaKnown RBP10.81□□□□□ -0.68
CCDC113-202ENST00000443128 EIF2AK4Q9P2K8 1649 aaKnown RBP10.81□□□□□ -0.68
CCDC113-202ENST00000443128 CCDC30Q5VVM6 783 aa10.81□□□□□ -0.68
CCDC113-202ENST00000443128 RIMS2Q9UQ26 1411 aa10.81□□□□□ -0.68
CCDC113-202ENST00000443128 SAMD9LQ8IVG5 1584 aa10.81□□□□□ -0.68
CCDC113-202ENST00000443128 CLASP1Q7Z460 1538 aa10.81□□□□□ -0.68
CCDC113-202ENST00000443128 YEATS2Q9ULM3 1422 aa10.8□□□□□ -0.68
CCDC113-202ENST00000443128 NFE2L2Q16236 605 aa10.8□□□□□ -0.68
CCDC113-202ENST00000443128 ZCCHC11Q5TAX3 1644 aaKnown RBP10.8□□□□□ -0.68
CCDC113-202ENST00000443128 STRN4Q9NRL3 753 aa10.8□□□□□ -0.68
CCDC113-202ENST00000443128 GCC2Q8IWJ2 1684 aa10.8□□□□□ -0.68
CCDC113-202ENST00000443128 ZNF530Q6P9A1 599 aaPredicted RBP10.8□□□□□ -0.68
CCDC113-202ENST00000443128 NINLQ9Y2I6 1382 aa10.8□□□□□ -0.68
CCDC113-202ENST00000443128 ARHGEF5Q12774 1597 aa10.79□□□□□ -0.68
CCDC113-202ENST00000443128 CT47B1P0C2W7 299 aaPredicted RBP10.79□□□□□ -0.68
CCDC113-202ENST00000443128 TATP17735 454 aaPredicted RBP10.79□□□□□ -0.68
CCDC113-202ENST00000443128 NSD2O96028 1365 aa10.79□□□□□ -0.68
CCDC113-202ENST00000443128 RIC3Q7Z5B4 369 aa10.79□□□□□ -0.68
CCDC113-202ENST00000443128 PHF8Q9UPP1 1060 aa10.79□□□□□ -0.68
CCDC113-202ENST00000443128 ADGBQ8N7X0 1667 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms