RNA–Protein interactions for RNA: ENST00000443003.2

RPSA-202, Transcript of ribosomal protein SA, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RPSA, Length 1,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-202ENST00000443003 CDC42BPGQ6DT37 1551 aa11.35□□□□□ -0.59
RPSA-202ENST00000443003 BRWD3Q6RI45 1802 aa11.35□□□□□ -0.59
RPSA-202ENST00000443003 MYOM2P54296 1465 aa11.34□□□□□ -0.59
RPSA-202ENST00000443003 XPCQ01831 940 aaPredicted RBP11.34□□□□□ -0.59
RPSA-202ENST00000443003 PXDNQ92626 1479 aa11.33□□□□□ -0.6
RPSA-202ENST00000443003 FNBP4Q8N3X1 1017 aaPredicted RBP11.33□□□□□ -0.6
RPSA-202ENST00000443003 HFM1A2PYH4 1435 aa11.33□□□□□ -0.6
RPSA-202ENST00000443003 BCL9LQ86UU0 1499 aa11.32□□□□□ -0.6
RPSA-202ENST00000443003 ESCO1Q5FWF5 840 aa11.32□□□□□ -0.6
RPSA-202ENST00000443003 GLI3P10071 1580 aa11.32□□□□□ -0.6
RPSA-202ENST00000443003 NPHP3Q7Z494 1330 aa11.32□□□□□ -0.6
RPSA-202ENST00000443003 NUTM2FA1L443 756 aa11.31□□□□□ -0.6
RPSA-202ENST00000443003 USP32Q8NFA0 1604 aa11.31□□□□□ -0.6
RPSA-202ENST00000443003 PLCH1Q4KWH8 1693 aa11.3□□□□□ -0.6
RPSA-202ENST00000443003 PRAG1Q86YV5 1406 aa11.3□□□□□ -0.6
RPSA-202ENST00000443003 VGFO15240 615 aaPredicted RBP11.3□□□□□ -0.6
RPSA-202ENST00000443003 KIF1AQ12756 1690 aa11.3□□□□□ -0.6
RPSA-202ENST00000443003 FMN2Q9NZ56 1722 aa11.29□□□□□ -0.6
RPSA-202ENST00000443003 IFT172Q9UG01 1749 aa11.29□□□□□ -0.6
RPSA-202ENST00000443003 RGPD8O14715 1765 aaPredicted RBP11.29□□□□□ -0.6
RPSA-202ENST00000443003 NAIPQ13075 1403 aa11.29□□□□□ -0.6
RPSA-202ENST00000443003 FOXO3O43524 673 aa11.29□□□□□ -0.6
RPSA-202ENST00000443003 PLEKHG5O94827 1062 aa11.29□□□□□ -0.6
RPSA-202ENST00000443003 GJD4Q96KN9 370 aaPredicted RBP11.29□□□□□ -0.6
RPSA-202ENST00000443003 RALGAPBQ86X10 1494 aa11.29□□□□□ -0.6
RPSA-202ENST00000443003 EP400Q96L91 3159 aa11.29□□□□□ -0.6
RPSA-202ENST00000443003 KNDC1Q76NI1 1749 aa11.29□□□□□ -0.6
RPSA-202ENST00000443003 ABCA3Q99758 1704 aa11.28□□□□□ -0.6
RPSA-202ENST00000443003 BLMP54132 1417 aaPredicted RBP11.27□□□□□ -0.6
RPSA-202ENST00000443003 SRCAPQ6ZRS2 3230 aa11.27□□□□□ -0.61
RPSA-202ENST00000443003 CCDC125Q86Z20 511 aa11.27□□□□□ -0.61
RPSA-202ENST00000443003 LRPPRCP42704 1394 aaKnown RBP11.27□□□□□ -0.61
RPSA-202ENST00000443003 HAP1P54257 671 aaPredicted RBP11.26□□□□□ -0.61
RPSA-202ENST00000443003 DEFB132Q7Z7B7 95 aa11.26□□□□□ -0.61
RPSA-202ENST00000443003 STK26Q9P289 416 aa11.26□□□□□ -0.61
RPSA-202ENST00000443003 LRP5O75197 1615 aa11.26□□□□□ -0.61
RPSA-202ENST00000443003 SLIT2O94813 1529 aa11.25□□□□□ -0.61
RPSA-202ENST00000443003 UNC5CLQ8IV45 518 aa11.25□□□□□ -0.61
RPSA-202ENST00000443003 NWD2Q9ULI1 1742 aa11.25□□□□□ -0.61
RPSA-202ENST00000443003 RPGRIP1LQ68CZ1 1315 aa11.25□□□□□ -0.61
RPSA-202ENST00000443003 RRBP1Q9P2E9 1410 aaKnown RBP11.25□□□□□ -0.61
RPSA-202ENST00000443003 SF3B2Q13435 895 aaKnown RBP11.24□□□□□ -0.61
RPSA-202ENST00000443003 WAPLQ7Z5K2 1190 aa11.24□□□□□ -0.61
RPSA-202ENST00000443003 CCDC9Q9Y3X0 531 aaKnown RBP11.24□□□□□ -0.61
RPSA-202ENST00000443003 PLEKHH1Q9ULM0 1364 aa11.24□□□□□ -0.61
RPSA-202ENST00000443003 CCDC144AA2RUR9 1427 aa11.24□□□□□ -0.61
RPSA-202ENST00000443003 A0A0G2JS52 829 aa11.23□□□□□ -0.61
RPSA-202ENST00000443003 MYT1Q01538 1121 aa11.23□□□□□ -0.61
RPSA-202ENST00000443003 SLC4A1APQ9BWU0 796 aaKnown RBP11.23□□□□□ -0.61
RPSA-202ENST00000443003 TECPR2O15040 1411 aa11.22□□□□□ -0.61
RPSA-202ENST00000443003 SPATA31A3Q5VYP0 1347 aa11.22□□□□□ -0.61
RPSA-202ENST00000443003 TNS3Q68CZ2 1445 aa11.22□□□□□ -0.61
RPSA-202ENST00000443003 ADGRF5Q8IZF2 1346 aa11.22□□□□□ -0.61
RPSA-202ENST00000443003 NRAPQ86VF7 1730 aa11.21□□□□□ -0.61
RPSA-202ENST00000443003 RGL3Q3MIN7 710 aa11.21□□□□□ -0.61
RPSA-202ENST00000443003 TMEM132EQ6IEE7 984 aa11.21□□□□□ -0.61
RPSA-202ENST00000443003 LMOD2Q6P5Q4 547 aa11.21□□□□□ -0.61
RPSA-202ENST00000443003 SEPT12Q8IYM1 358 aa11.21□□□□□ -0.61
RPSA-202ENST00000443003 PIAS4Q8N2W9 510 aaPredicted RBP11.21□□□□□ -0.61
RPSA-202ENST00000443003 PSDA5PKW4 1024 aaPredicted RBP11.2□□□□□ -0.62
RPSA-202ENST00000443003 KRT28Q7Z3Y7 464 aa11.2□□□□□ -0.62
RPSA-202ENST00000443003 CABLES1Q8TDN4 633 aa11.2□□□□□ -0.62
RPSA-202ENST00000443003 RGPD1P0DJD0 1748 aa11.2□□□□□ -0.62
RPSA-202ENST00000443003 PIK3C2GO75747 1445 aa11.18□□□□□ -0.62
RPSA-202ENST00000443003 YTHDC2Q9H6S0 1430 aaKnown RBP11.18□□□□□ -0.62
RPSA-202ENST00000443003 VPS72Q15906 364 aa11.18□□□□□ -0.62
RPSA-202ENST00000443003 KRT27Q7Z3Y8 459 aa11.18□□□□□ -0.62
RPSA-202ENST00000443003 ABCC11Q96J66 1382 aa11.17□□□□□ -0.62
RPSA-202ENST00000443003 PHF8Q9UPP1 1060 aa11.17□□□□□ -0.62
RPSA-202ENST00000443003 SPATA31E1Q6ZUB1 1445 aa11.17□□□□□ -0.62
RPSA-202ENST00000443003 ANKRD30BQ9BXX2 1392 aa11.16□□□□□ -0.62
RPSA-202ENST00000443003 TNS1Q9HBL0 1735 aaKnown RBP11.16□□□□□ -0.62
RPSA-202ENST00000443003 BAG6P46379 1132 aa11.16□□□□□ -0.62
RPSA-202ENST00000443003 SAFB2Q14151 953 aaKnown RBP eCLIP11.16□□□□□ -0.62
RPSA-202ENST00000443003 NRXN1Q9ULB1 1477 aa11.16□□□□□ -0.62
RPSA-202ENST00000443003 COL14A1Q05707 1796 aaKnown RBP11.16□□□□□ -0.62
RPSA-202ENST00000443003 TRPM3Q9HCF6 1732 aaPredicted RBP11.15□□□□□ -0.62
RPSA-202ENST00000443003 PSME1Q06323 249 aa11.15□□□□□ -0.62
RPSA-202ENST00000443003 ARHGEF10O15013 1369 aa11.15□□□□□ -0.63
RPSA-202ENST00000443003 FAM98CQ17RN3 349 aaKnown RBP11.14□□□□□ -0.63
RPSA-202ENST00000443003 ADGRB2O60241 1585 aa11.14□□□□□ -0.63
RPSA-202ENST00000443003 SBNO1A3KN83 1393 aa11.14□□□□□ -0.63
RPSA-202ENST00000443003 ALS2Q96Q42 1657 aa11.14□□□□□ -0.63
RPSA-202ENST00000443003 CRYBG1Q9Y4K1 1723 aa11.13□□□□□ -0.63
RPSA-202ENST00000443003 HRCP23327 699 aa11.13□□□□□ -0.63
RPSA-202ENST00000443003 FAM182BQ5T319 152 aa11.13□□□□□ -0.63
RPSA-202ENST00000443003 PMFBP1Q8TBY8 1022 aa11.13□□□□□ -0.63
RPSA-202ENST00000443003 FAM83GA6ND36 823 aa11.12□□□□□ -0.63
RPSA-202ENST00000443003 EN1Q05925 392 aaPredicted RBP11.12□□□□□ -0.63
RPSA-202ENST00000443003 BTG4Q9NY30 223 aa11.12□□□□□ -0.63
RPSA-202ENST00000443003 THSD7AQ9UPZ6 1657 aa11.11□□□□□ -0.63
RPSA-202ENST00000443003 PRAM1Q96QH2 718 aa11.11□□□□□ -0.63
RPSA-202ENST00000443003 ONECUT3O60422 494 aaPredicted RBP11.1□□□□□ -0.63
RPSA-202ENST00000443003 R3HDM1Q15032 1099 aaKnown RBP11.1□□□□□ -0.63
RPSA-202ENST00000443003 CFAP70Q5T0N1 1121 aa11.1□□□□□ -0.63
RPSA-202ENST00000443003 POGKQ9P215 609 aa11.1□□□□□ -0.63
RPSA-202ENST00000443003 DHX57Q6P158 1386 aaKnown RBP11.1□□□□□ -0.63
RPSA-202ENST00000443003 ANKARQ7Z5J8 1434 aa11.09□□□□□ -0.63
RPSA-202ENST00000443003 MPHOSPH9Q99550 1183 aa11.09□□□□□ -0.63
RPSA-202ENST00000443003 ITSN1Q15811 1721 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms