RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 QTRT2Q9H974 415 aaKnown RBP12.55□□□□□ -0.4
TOP3B-209ENST00000442653 ADGRF5Q8IZF2 1346 aa12.55□□□□□ -0.4
TOP3B-209ENST00000442653 SPATA31E1Q6ZUB1 1445 aa12.54□□□□□ -0.4
TOP3B-209ENST00000442653 PPP4R3CPQ6ZMV5 832 aa12.54□□□□□ -0.4
TOP3B-209ENST00000442653 NGLY1Q96IV0 654 aa12.54□□□□□ -0.4
TOP3B-209ENST00000442653 CDC42BPGQ6DT37 1551 aa12.54□□□□□ -0.4
TOP3B-209ENST00000442653 RBM6P78332 1123 aaKnown RBP12.53□□□□□ -0.4
TOP3B-209ENST00000442653 CCDC144AA2RUR9 1427 aa12.53□□□□□ -0.4
TOP3B-209ENST00000442653 COL22A1Q8NFW1 1626 aaPredicted RBP12.52□□□□□ -0.4
TOP3B-209ENST00000442653 RGL3Q3MIN7 710 aa12.52□□□□□ -0.41
TOP3B-209ENST00000442653 TECPR2O15040 1411 aa12.52□□□□□ -0.41
TOP3B-209ENST00000442653 PXDNQ92626 1479 aa12.52□□□□□ -0.41
TOP3B-209ENST00000442653 IFT172Q9UG01 1749 aa12.51□□□□□ -0.41
TOP3B-209ENST00000442653 STK26Q9P289 416 aa12.51□□□□□ -0.41
TOP3B-209ENST00000442653 MYOM2P54296 1465 aa12.51□□□□□ -0.41
TOP3B-209ENST00000442653 XPCQ01831 940 aaPredicted RBP12.5□□□□□ -0.41
TOP3B-209ENST00000442653 ESCO1Q5FWF5 840 aa12.5□□□□□ -0.41
TOP3B-209ENST00000442653 WAPLQ7Z5K2 1190 aa12.5□□□□□ -0.41
TOP3B-209ENST00000442653 MPHOSPH9Q99550 1183 aa12.5□□□□□ -0.41
TOP3B-209ENST00000442653 USP21Q9UK80 565 aa12.5□□□□□ -0.41
TOP3B-209ENST00000442653 LRPPRCP42704 1394 aaKnown RBP12.5□□□□□ -0.41
TOP3B-209ENST00000442653 PLEKHH1Q9ULM0 1364 aa12.5□□□□□ -0.41
TOP3B-209ENST00000442653 PIK3C2GO75747 1445 aa12.5□□□□□ -0.41
TOP3B-209ENST00000442653 ANKRD30BQ9BXX2 1392 aa12.49□□□□□ -0.41
TOP3B-209ENST00000442653 NPHP3Q7Z494 1330 aa12.49□□□□□ -0.41
TOP3B-209ENST00000442653 FOXO3O43524 673 aa12.49□□□□□ -0.41
TOP3B-209ENST00000442653 TMEM132EQ6IEE7 984 aa12.49□□□□□ -0.41
TOP3B-209ENST00000442653 FNBP4Q8N3X1 1017 aaPredicted RBP12.49□□□□□ -0.41
TOP3B-209ENST00000442653 ABCC11Q96J66 1382 aa12.48□□□□□ -0.41
TOP3B-209ENST00000442653 NUTM2FA1L443 756 aa12.48□□□□□ -0.41
TOP3B-209ENST00000442653 KNDC1Q76NI1 1749 aa12.48□□□□□ -0.41
TOP3B-209ENST00000442653 ATRNO75882 1429 aa12.47□□□□□ -0.41
TOP3B-209ENST00000442653 TRPC5Q9UL62 973 aaPredicted RBP12.47□□□□□ -0.41
TOP3B-209ENST00000442653 BCL9LQ86UU0 1499 aa12.46□□□□□ -0.41
TOP3B-209ENST00000442653 YTHDC2Q9H6S0 1430 aaKnown RBP12.46□□□□□ -0.41
TOP3B-209ENST00000442653 FMN2Q9NZ56 1722 aa12.45□□□□□ -0.42
TOP3B-209ENST00000442653 MARF1Q9Y4F3 1742 aaKnown RBP12.45□□□□□ -0.42
TOP3B-209ENST00000442653 ATAD2Q6PL18 1390 aa12.44□□□□□ -0.42
TOP3B-209ENST00000442653 NRXN1Q9ULB1 1477 aa12.44□□□□□ -0.42
TOP3B-209ENST00000442653 SPATA31A3Q5VYP0 1347 aa12.42□□□□□ -0.42
TOP3B-209ENST00000442653 KIF1AQ12756 1690 aa12.42□□□□□ -0.42
TOP3B-209ENST00000442653 C14orf93Q9H972 538 aaKnown RBP12.42□□□□□ -0.42
TOP3B-209ENST00000442653 CFAP70Q5T0N1 1121 aa12.41□□□□□ -0.42
TOP3B-209ENST00000442653 RGPD8O14715 1765 aaPredicted RBP12.41□□□□□ -0.42
TOP3B-209ENST00000442653 SIRT1Q96EB6 747 aa12.4□□□□□ -0.42
TOP3B-209ENST00000442653 GJD4Q96KN9 370 aaPredicted RBP12.4□□□□□ -0.42
TOP3B-209ENST00000442653 SLIT2O94813 1529 aa12.4□□□□□ -0.42
TOP3B-209ENST00000442653 USP32Q8NFA0 1604 aa12.4□□□□□ -0.42
TOP3B-209ENST00000442653 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.4□□□□□ -0.43
TOP3B-209ENST00000442653 GLI3P10071 1580 aa12.39□□□□□ -0.43
TOP3B-209ENST00000442653 KRT28Q7Z3Y7 464 aa12.39□□□□□ -0.43
TOP3B-209ENST00000442653 TNS3Q68CZ2 1445 aa12.38□□□□□ -0.43
TOP3B-209ENST00000442653 SAFB2Q14151 953 aaKnown RBP eCLIP12.38□□□□□ -0.43
TOP3B-209ENST00000442653 PRAM1Q96QH2 718 aa12.38□□□□□ -0.43
TOP3B-209ENST00000442653 PHF8Q9UPP1 1060 aa12.38□□□□□ -0.43
TOP3B-209ENST00000442653 RALGAPBQ86X10 1494 aa12.38□□□□□ -0.43
TOP3B-209ENST00000442653 UNC5CLQ8IV45 518 aa12.37□□□□□ -0.43
TOP3B-209ENST00000442653 CABLES1Q8TDN4 633 aa12.37□□□□□ -0.43
TOP3B-209ENST00000442653 DHX57Q6P158 1386 aaKnown RBP12.37□□□□□ -0.43
TOP3B-209ENST00000442653 RAB3GAP2Q9H2M9 1393 aa12.37□□□□□ -0.43
TOP3B-209ENST00000442653 ADGRB1O14514 1584 aa12.37□□□□□ -0.43
TOP3B-209ENST00000442653 PLEKHG5O94827 1062 aa12.36□□□□□ -0.43
TOP3B-209ENST00000442653 DLC1Q96QB1 1528 aa12.36□□□□□ -0.43
TOP3B-209ENST00000442653 SBNO1A3KN83 1393 aa12.35□□□□□ -0.43
TOP3B-209ENST00000442653 ABCA3Q99758 1704 aa12.35□□□□□ -0.43
TOP3B-209ENST00000442653 ADGRB2O60241 1585 aa12.35□□□□□ -0.43
TOP3B-209ENST00000442653 PLCH1Q4KWH8 1693 aa12.34□□□□□ -0.43
TOP3B-209ENST00000442653 ACIN1Q9UKV3 1341 aaKnown RBP12.34□□□□□ -0.43
TOP3B-209ENST00000442653 BRWD3Q6RI45 1802 aa12.33□□□□□ -0.44
TOP3B-209ENST00000442653 KCNA4P22459 653 aa12.33□□□□□ -0.44
TOP3B-209ENST00000442653 PSME1Q06323 249 aa12.33□□□□□ -0.44
TOP3B-209ENST00000442653 PMFBP1Q8TBY8 1022 aa12.33□□□□□ -0.44
TOP3B-209ENST00000442653 POGKQ9P215 609 aa12.33□□□□□ -0.44
TOP3B-209ENST00000442653 ANKARQ7Z5J8 1434 aa12.33□□□□□ -0.44
TOP3B-209ENST00000442653 ARHGEF10O15013 1369 aa12.32□□□□□ -0.44
TOP3B-209ENST00000442653 HAP1P54257 671 aaPredicted RBP12.32□□□□□ -0.44
TOP3B-209ENST00000442653 LMOD2Q6P5Q4 547 aa12.32□□□□□ -0.44
TOP3B-209ENST00000442653 CCDC125Q86Z20 511 aa12.32□□□□□ -0.44
TOP3B-209ENST00000442653 HIRIP3Q9BW71 556 aaPredicted RBP12.32□□□□□ -0.44
TOP3B-209ENST00000442653 TRAK1Q9UPV9 953 aa12.32□□□□□ -0.44
TOP3B-209ENST00000442653 PRR36Q9H6K5 1346 aa12.32□□□□□ -0.44
TOP3B-209ENST00000442653 TRPM3Q9HCF6 1732 aaPredicted RBP12.31□□□□□ -0.44
TOP3B-209ENST00000442653 NWD2Q9ULI1 1742 aa12.31□□□□□ -0.44
TOP3B-209ENST00000442653 VPS72Q15906 364 aa12.31□□□□□ -0.44
TOP3B-209ENST00000442653 SEPT12Q8IYM1 358 aa12.31□□□□□ -0.44
TOP3B-209ENST00000442653 ZRANB1Q9UGI0 708 aa12.31□□□□□ -0.44
TOP3B-209ENST00000442653 BLMP54132 1417 aaPredicted RBP12.3□□□□□ -0.44
TOP3B-209ENST00000442653 FAM83GA6ND36 823 aa12.3□□□□□ -0.44
TOP3B-209ENST00000442653 MINK1Q8N4C8 1332 aaPredicted RBP12.3□□□□□ -0.44
TOP3B-209ENST00000442653 ALS2Q96Q42 1657 aa12.29□□□□□ -0.44
TOP3B-209ENST00000442653 TULP4Q9NRJ4 1543 aa12.29□□□□□ -0.44
TOP3B-209ENST00000442653 ONECUT3O60422 494 aaPredicted RBP12.29□□□□□ -0.44
TOP3B-209ENST00000442653 KDM2AQ9Y2K7 1162 aa12.29□□□□□ -0.44
TOP3B-209ENST00000442653 NRAPQ86VF7 1730 aa12.28□□□□□ -0.44
TOP3B-209ENST00000442653 DEFB132Q7Z7B7 95 aa12.28□□□□□ -0.44
TOP3B-209ENST00000442653 DCAF11Q8TEB1 546 aa12.28□□□□□ -0.44
TOP3B-209ENST00000442653 CCDC9Q9Y3X0 531 aaKnown RBP12.28□□□□□ -0.44
TOP3B-209ENST00000442653 WASLO00401 505 aaPredicted RBP12.27□□□□□ -0.45
TOP3B-209ENST00000442653 MAPK8IP2Q13387 824 aaPredicted RBP12.26□□□□□ -0.45
TOP3B-209ENST00000442653 KRT27Q7Z3Y8 459 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms