RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 BRINP3Q76B58 766 aa18.13■□□□□ 0.49
CDCA4P3-201ENST00000442572 C1orf167Q5SNV9 1468 aa18.13■□□□□ 0.49
CDCA4P3-201ENST00000442572 ADGRB2O60241 1585 aa18.12■□□□□ 0.49
CDCA4P3-201ENST00000442572 MED1Q15648 1581 aaPredicted RBP18.12■□□□□ 0.49
CDCA4P3-201ENST00000442572 WAPLQ7Z5K2 1190 aa18.11■□□□□ 0.49
CDCA4P3-201ENST00000442572 SHPRHQ149N8 1683 aa18.11■□□□□ 0.49
CDCA4P3-201ENST00000442572 PLEKHH1Q9ULM0 1364 aa18.09■□□□□ 0.49
CDCA4P3-201ENST00000442572 L3MBTL2Q969R5 705 aa18.09■□□□□ 0.49
CDCA4P3-201ENST00000442572 SIN3AQ96ST3 1273 aa18.09■□□□□ 0.49
CDCA4P3-201ENST00000442572 TRPM1Q7Z4N2 1603 aa18.09■□□□□ 0.49
CDCA4P3-201ENST00000442572 JCADQ9P266 1359 aa18.08■□□□□ 0.49
CDCA4P3-201ENST00000442572 KIF1AQ12756 1690 aa18.08■□□□□ 0.48
CDCA4P3-201ENST00000442572 RGPD8O14715 1765 aaPredicted RBP18.07■□□□□ 0.48
CDCA4P3-201ENST00000442572 PRAM1Q96QH2 718 aa18.07■□□□□ 0.48
CDCA4P3-201ENST00000442572 POGKQ9P215 609 aa18.07■□□□□ 0.48
CDCA4P3-201ENST00000442572 DISP3Q9P2K9 1392 aa18.06■□□□□ 0.48
CDCA4P3-201ENST00000442572 NEUROD1Q13562 356 aa18.06■□□□□ 0.48
CDCA4P3-201ENST00000442572 TRAK1Q9UPV9 953 aa18.05■□□□□ 0.48
CDCA4P3-201ENST00000442572 EIF3AQ14152 1382 aaKnown RBP18.04■□□□□ 0.48
CDCA4P3-201ENST00000442572 ITSN1Q15811 1721 aa18.02■□□□□ 0.48
CDCA4P3-201ENST00000442572 ANKARQ7Z5J8 1434 aa18.02■□□□□ 0.48
CDCA4P3-201ENST00000442572 LRRC59Q96AG4 307 aaKnown RBP18.02■□□□□ 0.48
CDCA4P3-201ENST00000442572 SPATA31A6Q5VVP1 1343 aa18.01■□□□□ 0.47
CDCA4P3-201ENST00000442572 CLSPNQ9HAW4 1339 aa18.01■□□□□ 0.47
CDCA4P3-201ENST00000442572 ORAI2Q96SN7 254 aa18.01■□□□□ 0.47
CDCA4P3-201ENST00000442572 TONSLQ96HA7 1378 aa18.01■□□□□ 0.47
CDCA4P3-201ENST00000442572 NPHP3Q7Z494 1330 aa18■□□□□ 0.47
CDCA4P3-201ENST00000442572 ESCO1Q5FWF5 840 aa18■□□□□ 0.47
CDCA4P3-201ENST00000442572 USP32Q8NFA0 1604 aa18■□□□□ 0.47
CDCA4P3-201ENST00000442572 SOS2Q07890 1332 aaPredicted RBP17.99■□□□□ 0.47
CDCA4P3-201ENST00000442572 SAFB2Q14151 953 aaKnown RBP eCLIP17.99■□□□□ 0.47
CDCA4P3-201ENST00000442572 TULP4Q9NRJ4 1543 aa17.98■□□□□ 0.47
CDCA4P3-201ENST00000442572 NBPF1Q3BBV0 1214 aa17.98■□□□□ 0.47
CDCA4P3-201ENST00000442572 QRICH2Q9H0J4 1663 aa17.97■□□□□ 0.47
CDCA4P3-201ENST00000442572 PCGF6Q9BYE7 350 aa17.97■□□□□ 0.47
CDCA4P3-201ENST00000442572 COL22A1Q8NFW1 1626 aaPredicted RBP17.96■□□□□ 0.47
CDCA4P3-201ENST00000442572 MINK1Q8N4C8 1332 aaPredicted RBP17.96■□□□□ 0.46
CDCA4P3-201ENST00000442572 PXDNQ92626 1479 aa17.95■□□□□ 0.46
CDCA4P3-201ENST00000442572 GPRASP1Q5JY77 1395 aa17.95■□□□□ 0.46
CDCA4P3-201ENST00000442572 WASLO00401 505 aaPredicted RBP17.95■□□□□ 0.46
CDCA4P3-201ENST00000442572 ROCK2O75116 1388 aaKnown RBP17.94■□□□□ 0.46
CDCA4P3-201ENST00000442572 PNPLA6Q8IY17 1366 aa17.93■□□□□ 0.46
CDCA4P3-201ENST00000442572 NUTM2FA1L443 756 aa17.93■□□□□ 0.46
CDCA4P3-201ENST00000442572 PHF8Q9UPP1 1060 aa17.93■□□□□ 0.46
CDCA4P3-201ENST00000442572 RALGAPBQ86X10 1494 aa17.93■□□□□ 0.46
CDCA4P3-201ENST00000442572 CENPJQ9HC77 1338 aaPredicted RBP17.93■□□□□ 0.46
CDCA4P3-201ENST00000442572 FOXO3O43524 673 aa17.92■□□□□ 0.46
CDCA4P3-201ENST00000442572 DDX17Q92841 729 aaKnown RBP17.92■□□□□ 0.46
CDCA4P3-201ENST00000442572 HIRIP3Q9BW71 556 aaPredicted RBP17.92■□□□□ 0.46
CDCA4P3-201ENST00000442572 TIMELESSQ9UNS1 1208 aa17.92■□□□□ 0.46
CDCA4P3-201ENST00000442572 TOPAZ1Q8N9V7 1692 aa17.92■□□□□ 0.46
CDCA4P3-201ENST00000442572 LRP6O75581 1613 aa17.9■□□□□ 0.46
CDCA4P3-201ENST00000442572 ATP7BP35670 1465 aa17.9■□□□□ 0.46
CDCA4P3-201ENST00000442572 MARF1Q9Y4F3 1742 aaKnown RBP17.9■□□□□ 0.46
CDCA4P3-201ENST00000442572 NBPF8Q3BBV2 869 aa17.9■□□□□ 0.46
CDCA4P3-201ENST00000442572 PSME1Q06323 249 aa17.89■□□□□ 0.45
CDCA4P3-201ENST00000442572 TRPM3Q9HCF6 1732 aaPredicted RBP17.88■□□□□ 0.45
CDCA4P3-201ENST00000442572 PRR36Q9H6K5 1346 aa17.87■□□□□ 0.45
CDCA4P3-201ENST00000442572 SBNO1A3KN83 1393 aa17.87■□□□□ 0.45
CDCA4P3-201ENST00000442572 KRT28Q7Z3Y7 464 aa17.86■□□□□ 0.45
CDCA4P3-201ENST00000442572 NUDT16Q96DE0 195 aaKnown RBP17.86■□□□□ 0.45
CDCA4P3-201ENST00000442572 CDK19Q9BWU1 502 aa17.86■□□□□ 0.45
CDCA4P3-201ENST00000442572 SBNO2Q9Y2G9 1366 aa17.86■□□□□ 0.45
CDCA4P3-201ENST00000442572 MEX3CQ5U5Q3 659 aaKnown RBP17.85■□□□□ 0.45
CDCA4P3-201ENST00000442572 SPATA31A3Q5VYP0 1347 aa17.85■□□□□ 0.45
CDCA4P3-201ENST00000442572 ALS2Q96Q42 1657 aa17.85■□□□□ 0.45
CDCA4P3-201ENST00000442572 TNS3Q68CZ2 1445 aa17.84■□□□□ 0.45
CDCA4P3-201ENST00000442572 CARD11Q9BXL7 1154 aa17.84■□□□□ 0.45
CDCA4P3-201ENST00000442572 CCDC61Q9Y6R9 512 aa17.84■□□□□ 0.45
CDCA4P3-201ENST00000442572 ARHGEF10O15013 1369 aa17.83■□□□□ 0.45
CDCA4P3-201ENST00000442572 EVC2Q86UK5 1308 aa17.82■□□□□ 0.44
CDCA4P3-201ENST00000442572 ABCA3Q99758 1704 aa17.82■□□□□ 0.44
CDCA4P3-201ENST00000442572 NUTM2BA6NNL0 878 aaPredicted RBP17.82■□□□□ 0.44
CDCA4P3-201ENST00000442572 NUTM2EB1AL46 878 aaPredicted RBP17.82■□□□□ 0.44
CDCA4P3-201ENST00000442572 XPCQ01831 940 aaPredicted RBP17.82■□□□□ 0.44
CDCA4P3-201ENST00000442572 ILDR2Q71H61 639 aa17.82■□□□□ 0.44
CDCA4P3-201ENST00000442572 NUTM2AQ8IVF1 878 aaPredicted RBP17.82■□□□□ 0.44
CDCA4P3-201ENST00000442572 PMFBP1Q8TBY8 1022 aa17.82■□□□□ 0.44
CDCA4P3-201ENST00000442572 RGS17Q9UGC6 210 aaPredicted RBP17.82■□□□□ 0.44
CDCA4P3-201ENST00000442572 POLR3AO14802 1390 aaPredicted RBP17.81■□□□□ 0.44
CDCA4P3-201ENST00000442572 ZNF772Q68DY9 489 aaPredicted RBP17.81■□□□□ 0.44
CDCA4P3-201ENST00000442572 NGDNQ8NEJ9 315 aaKnown RBP17.81■□□□□ 0.44
CDCA4P3-201ENST00000442572 PLEKHG3A1L390 1219 aa17.8■□□□□ 0.44
CDCA4P3-201ENST00000442572 SLC24A1O60721 1099 aa17.8■□□□□ 0.44
CDCA4P3-201ENST00000442572 SRPK2P78362 688 aaKnown RBP17.8■□□□□ 0.44
CDCA4P3-201ENST00000442572 BRD4O60885 1362 aaPredicted RBP17.79■□□□□ 0.44
CDCA4P3-201ENST00000442572 CCER1Q8TC90 406 aaPredicted RBP17.78■□□□□ 0.44
CDCA4P3-201ENST00000442572 PPIP5K1Q6PFW1 1433 aa17.77■□□□□ 0.44
CDCA4P3-201ENST00000442572 CRYBG1Q9Y4K1 1723 aa17.77■□□□□ 0.44
CDCA4P3-201ENST00000442572 AKAP12Q02952 1782 aa17.76■□□□□ 0.43
CDCA4P3-201ENST00000442572 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.75■□□□□ 0.43
CDCA4P3-201ENST00000442572 ACEP12821 1306 aa17.75■□□□□ 0.43
CDCA4P3-201ENST00000442572 ATAD2Q6PL18 1390 aa17.75■□□□□ 0.43
CDCA4P3-201ENST00000442572 AFF2P51816 1311 aa17.74■□□□□ 0.43
CDCA4P3-201ENST00000442572 POTEAQ6S8J7 498 aa17.74■□□□□ 0.43
CDCA4P3-201ENST00000442572 C8orf37Q96NL8 207 aa17.74■□□□□ 0.43
CDCA4P3-201ENST00000442572 CABP2Q9NPB3 220 aa17.74■□□□□ 0.43
CDCA4P3-201ENST00000442572 NWD2Q9ULI1 1742 aa17.74■□□□□ 0.43
CDCA4P3-201ENST00000442572 ADAMTS2O95450 1211 aa17.73■□□□□ 0.43
CDCA4P3-201ENST00000442572 NGLY1Q96IV0 654 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms