RNA–Protein interactions for RNA: ENST00000442421.5

TRIM13-205, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-205ENST00000442421 ATAD2Q6PL18 1390 aa19.4■□□□□ 0.7
TRIM13-205ENST00000442421 CDC42BPGQ6DT37 1551 aa19.4■□□□□ 0.7
TRIM13-205ENST00000442421 ATRNO75882 1429 aa19.38■□□□□ 0.69
TRIM13-205ENST00000442421 TRPC5Q9UL62 973 aaPredicted RBP19.38■□□□□ 0.69
TRIM13-205ENST00000442421 MYOM2P54296 1465 aa19.37■□□□□ 0.69
TRIM13-205ENST00000442421 RPGRIP1LQ68CZ1 1315 aa19.37■□□□□ 0.69
TRIM13-205ENST00000442421 FNBP4Q8N3X1 1017 aaPredicted RBP19.37■□□□□ 0.69
TRIM13-205ENST00000442421 PXDNQ92626 1479 aa19.36■□□□□ 0.69
TRIM13-205ENST00000442421 ESCO1Q5FWF5 840 aa19.35■□□□□ 0.69
TRIM13-205ENST00000442421 SLC4A1APQ9BWU0 796 aaKnown RBP19.35■□□□□ 0.69
TRIM13-205ENST00000442421 IFT172Q9UG01 1749 aa19.34■□□□□ 0.69
TRIM13-205ENST00000442421 XPCQ01831 940 aaPredicted RBP19.34■□□□□ 0.69
TRIM13-205ENST00000442421 NPHP3Q7Z494 1330 aa19.33■□□□□ 0.69
TRIM13-205ENST00000442421 BCL9LQ86UU0 1499 aa19.33■□□□□ 0.68
TRIM13-205ENST00000442421 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.32■□□□□ 0.68
TRIM13-205ENST00000442421 KNDC1Q76NI1 1749 aa19.31■□□□□ 0.68
TRIM13-205ENST00000442421 FMN2Q9NZ56 1722 aa19.31■□□□□ 0.68
TRIM13-205ENST00000442421 NUTM2FA1L443 756 aa19.31■□□□□ 0.68
TRIM13-205ENST00000442421 FOXD1Q16676 465 aa19.31■□□□□ 0.68
TRIM13-205ENST00000442421 RGPD8O14715 1765 aaPredicted RBP19.3■□□□□ 0.68
TRIM13-205ENST00000442421 FOXO3O43524 673 aa19.3■□□□□ 0.68
TRIM13-205ENST00000442421 ADGRF5Q8IZF2 1346 aa19.29■□□□□ 0.68
TRIM13-205ENST00000442421 STK26Q9P289 416 aa19.29■□□□□ 0.68
TRIM13-205ENST00000442421 BRWD3Q6RI45 1802 aa19.28■□□□□ 0.68
TRIM13-205ENST00000442421 TECPR2O15040 1411 aa19.28■□□□□ 0.68
TRIM13-205ENST00000442421 WAPLQ7Z5K2 1190 aa19.28■□□□□ 0.68
TRIM13-205ENST00000442421 KIF1AQ12756 1690 aa19.27■□□□□ 0.68
TRIM13-205ENST00000442421 PLEKHH1Q9ULM0 1364 aa19.26■□□□□ 0.67
TRIM13-205ENST00000442421 GLI3P10071 1580 aa19.26■□□□□ 0.67
TRIM13-205ENST00000442421 CCDC144AA2RUR9 1427 aa19.25■□□□□ 0.67
TRIM13-205ENST00000442421 LRPPRCP42704 1394 aaKnown RBP19.25■□□□□ 0.67
TRIM13-205ENST00000442421 RGL3Q3MIN7 710 aa19.25■□□□□ 0.67
TRIM13-205ENST00000442421 GJD4Q96KN9 370 aaPredicted RBP19.25■□□□□ 0.67
TRIM13-205ENST00000442421 ZRANB1Q9UGI0 708 aa19.25■□□□□ 0.67
TRIM13-205ENST00000442421 USP32Q8NFA0 1604 aa19.25■□□□□ 0.67
TRIM13-205ENST00000442421 SPATA31E1Q6ZUB1 1445 aa19.25■□□□□ 0.67
TRIM13-205ENST00000442421 TMEM132EQ6IEE7 984 aa19.24■□□□□ 0.67
TRIM13-205ENST00000442421 RALGAPBQ86X10 1494 aa19.22■□□□□ 0.67
TRIM13-205ENST00000442421 ABCC11Q96J66 1382 aa19.22■□□□□ 0.67
TRIM13-205ENST00000442421 SLIT2O94813 1529 aa19.22■□□□□ 0.67
TRIM13-205ENST00000442421 ANKRD30BQ9BXX2 1392 aa19.21■□□□□ 0.67
TRIM13-205ENST00000442421 PLCH1Q4KWH8 1693 aa19.21■□□□□ 0.67
TRIM13-205ENST00000442421 PIK3C2GO75747 1445 aa19.21■□□□□ 0.67
TRIM13-205ENST00000442421 CCDC125Q86Z20 511 aa19.21■□□□□ 0.67
TRIM13-205ENST00000442421 ABCA3Q99758 1704 aa19.21■□□□□ 0.67
TRIM13-205ENST00000442421 SPATA31A3Q5VYP0 1347 aa19.21■□□□□ 0.67
TRIM13-205ENST00000442421 UNC5CLQ8IV45 518 aa19.2■□□□□ 0.66
TRIM13-205ENST00000442421 YTHDC2Q9H6S0 1430 aaKnown RBP19.19■□□□□ 0.66
TRIM13-205ENST00000442421 NWD2Q9ULI1 1742 aa19.17■□□□□ 0.66
TRIM13-205ENST00000442421 KRT28Q7Z3Y7 464 aa19.17■□□□□ 0.66
TRIM13-205ENST00000442421 PLEKHG5O94827 1062 aa19.16■□□□□ 0.66
TRIM13-205ENST00000442421 BLMP54132 1417 aaPredicted RBP19.16■□□□□ 0.66
TRIM13-205ENST00000442421 TNS3Q68CZ2 1445 aa19.16■□□□□ 0.66
TRIM13-205ENST00000442421 MPHOSPH9Q99550 1183 aa19.15■□□□□ 0.66
TRIM13-205ENST00000442421 HAP1P54257 671 aaPredicted RBP19.14■□□□□ 0.65
TRIM13-205ENST00000442421 CABLES1Q8TDN4 633 aa19.14■□□□□ 0.65
TRIM13-205ENST00000442421 DEFB132Q7Z7B7 95 aa19.12■□□□□ 0.65
TRIM13-205ENST00000442421 PHF8Q9UPP1 1060 aa19.12■□□□□ 0.65
TRIM13-205ENST00000442421 NRXN1Q9ULB1 1477 aa19.11■□□□□ 0.65
TRIM13-205ENST00000442421 SEPT12Q8IYM1 358 aa19.11■□□□□ 0.65
TRIM13-205ENST00000442421 SAFB2Q14151 953 aaKnown RBP eCLIP19.1■□□□□ 0.65
TRIM13-205ENST00000442421 VPS72Q15906 364 aa19.1■□□□□ 0.65
TRIM13-205ENST00000442421 LMOD2Q6P5Q4 547 aa19.1■□□□□ 0.65
TRIM13-205ENST00000442421 NRAPQ86VF7 1730 aa19.1■□□□□ 0.65
TRIM13-205ENST00000442421 PSME1Q06323 249 aa19.09■□□□□ 0.65
TRIM13-205ENST00000442421 SIRT1Q96EB6 747 aa19.09■□□□□ 0.65
TRIM13-205ENST00000442421 C14orf93Q9H972 538 aaKnown RBP19.09■□□□□ 0.65
TRIM13-205ENST00000442421 CCDC9Q9Y3X0 531 aaKnown RBP19.09■□□□□ 0.65
TRIM13-205ENST00000442421 TRPM3Q9HCF6 1732 aaPredicted RBP19.08■□□□□ 0.65
TRIM13-205ENST00000442421 CFAP70Q5T0N1 1121 aa19.08■□□□□ 0.64
TRIM13-205ENST00000442421 SBNO1A3KN83 1393 aa19.07■□□□□ 0.64
TRIM13-205ENST00000442421 DHX57Q6P158 1386 aaKnown RBP19.07■□□□□ 0.64
TRIM13-205ENST00000442421 SF3B2Q13435 895 aaKnown RBP19.07■□□□□ 0.64
TRIM13-205ENST00000442421 PRAM1Q96QH2 718 aa19.07■□□□□ 0.64
TRIM13-205ENST00000442421 ARHGEF10O15013 1369 aa19.06■□□□□ 0.64
TRIM13-205ENST00000442421 ADGRB2O60241 1585 aa19.06■□□□□ 0.64
TRIM13-205ENST00000442421 ALS2Q96Q42 1657 aa19.05■□□□□ 0.64
TRIM13-205ENST00000442421 LRP5O75197 1615 aa19.05■□□□□ 0.64
TRIM13-205ENST00000442421 KRT27Q7Z3Y8 459 aa19.05■□□□□ 0.64
TRIM13-205ENST00000442421 PMFBP1Q8TBY8 1022 aa19.05■□□□□ 0.64
TRIM13-205ENST00000442421 DLC1Q96QB1 1528 aa19.04■□□□□ 0.64
TRIM13-205ENST00000442421 FAM83GA6ND36 823 aa19.03■□□□□ 0.64
TRIM13-205ENST00000442421 ONECUT3O60422 494 aaPredicted RBP19.03■□□□□ 0.64
TRIM13-205ENST00000442421 COL14A1Q05707 1796 aaKnown RBP19.03■□□□□ 0.64
TRIM13-205ENST00000442421 ANKARQ7Z5J8 1434 aa19.02■□□□□ 0.64
TRIM13-205ENST00000442421 A0A0G2JS52 829 aa19.02■□□□□ 0.64
TRIM13-205ENST00000442421 MYT1Q01538 1121 aa19.02■□□□□ 0.64
TRIM13-205ENST00000442421 CRYBG1Q9Y4K1 1723 aa19.02■□□□□ 0.63
TRIM13-205ENST00000442421 POGKQ9P215 609 aa19.01■□□□□ 0.63
TRIM13-205ENST00000442421 RGPD1P0DJD0 1748 aa19■□□□□ 0.63
TRIM13-205ENST00000442421 ADGRB1O14514 1584 aa19■□□□□ 0.63
TRIM13-205ENST00000442421 FAM98CQ17RN3 349 aaKnown RBP18.99■□□□□ 0.63
TRIM13-205ENST00000442421 HIRIP3Q9BW71 556 aaPredicted RBP18.99■□□□□ 0.63
TRIM13-205ENST00000442421 BTG4Q9NY30 223 aa18.98■□□□□ 0.63
TRIM13-205ENST00000442421 PSDA5PKW4 1024 aaPredicted RBP18.97■□□□□ 0.63
TRIM13-205ENST00000442421 TULP4Q9NRJ4 1543 aa18.96■□□□□ 0.63
TRIM13-205ENST00000442421 TRAK1Q9UPV9 953 aa18.96■□□□□ 0.63
TRIM13-205ENST00000442421 TNS1Q9HBL0 1735 aaKnown RBP18.96■□□□□ 0.63
TRIM13-205ENST00000442421 MINK1Q8N4C8 1332 aaPredicted RBP18.96■□□□□ 0.63
TRIM13-205ENST00000442421 PRR36Q9H6K5 1346 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms