RNA–Protein interactions for RNA: ENST00000441883.5

MRPL28-204, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-204ENST00000441883 MYOM2P54296 1465 aa39.89■■■■□ 3.98
MRPL28-204ENST00000441883 KNDC1Q76NI1 1749 aa39.88■■■■□ 3.98
MRPL28-204ENST00000441883 MEX3CQ5U5Q3 659 aaKnown RBP39.88■■■■□ 3.97
MRPL28-204ENST00000441883 YTHDC2Q9H6S0 1430 aaKnown RBP39.88■■■■□ 3.97
MRPL28-204ENST00000441883 CDC42BPGQ6DT37 1551 aa39.88■■■■□ 3.97
MRPL28-204ENST00000441883 PLEKHH1Q9ULM0 1364 aa39.87■■■■□ 3.97
MRPL28-204ENST00000441883 NUTM2BA6NNL0 878 aaPredicted RBP39.87■■■■□ 3.97
MRPL28-204ENST00000441883 NUTM2EB1AL46 878 aaPredicted RBP39.87■■■■□ 3.97
MRPL28-204ENST00000441883 NUTM2AQ8IVF1 878 aaPredicted RBP39.87■■■■□ 3.97
MRPL28-204ENST00000441883 CFAP70Q5T0N1 1121 aa39.86■■■■□ 3.97
MRPL28-204ENST00000441883 PNPLA6Q8IY17 1366 aa39.84■■■■□ 3.97
MRPL28-204ENST00000441883 SOS2Q07890 1332 aaPredicted RBP39.84■■■■□ 3.97
MRPL28-204ENST00000441883 SIRT1Q96EB6 747 aa39.82■■■■□ 3.97
MRPL28-204ENST00000441883 ESCO1Q5FWF5 840 aa39.77■■■■□ 3.96
MRPL28-204ENST00000441883 ZNF772Q68DY9 489 aaPredicted RBP39.77■■■■□ 3.96
MRPL28-204ENST00000441883 DHX57Q6P158 1386 aaKnown RBP39.76■■■■□ 3.96
MRPL28-204ENST00000441883 NUTM2FA1L443 756 aa39.72■■■■□ 3.95
MRPL28-204ENST00000441883 FMN2Q9NZ56 1722 aa39.68■■■■□ 3.94
MRPL28-204ENST00000441883 NPHP3Q7Z494 1330 aa39.67■■■■□ 3.94
MRPL28-204ENST00000441883 FOXO3O43524 673 aa39.67■■■■□ 3.94
MRPL28-204ENST00000441883 DCAF11Q8TEB1 546 aa39.67■■■■□ 3.94
MRPL28-204ENST00000441883 KDM2AQ9Y2K7 1162 aa39.67■■■■□ 3.94
MRPL28-204ENST00000441883 AFF2P51816 1311 aa39.66■■■■□ 3.94
MRPL28-204ENST00000441883 ADGRB1O14514 1584 aa39.65■■■■□ 3.94
MRPL28-204ENST00000441883 PXDNQ92626 1479 aa39.64■■■■□ 3.94
MRPL28-204ENST00000441883 PRAM1Q96QH2 718 aa39.63■■■■□ 3.93
MRPL28-204ENST00000441883 C8orf37Q96NL8 207 aa39.62■■■■□ 3.93
MRPL28-204ENST00000441883 DLC1Q96QB1 1528 aa39.61■■■■□ 3.93
MRPL28-204ENST00000441883 STAC3Q96MF2 364 aa39.61■■■■□ 3.93
MRPL28-204ENST00000441883 XPCQ01831 940 aaPredicted RBP39.6■■■■□ 3.93
MRPL28-204ENST00000441883 ADAMTS2O95450 1211 aa39.59■■■■□ 3.93
MRPL28-204ENST00000441883 SAFB2Q14151 953 aaKnown RBP eCLIP39.59■■■■□ 3.93
MRPL28-204ENST00000441883 COL22A1Q8NFW1 1626 aaPredicted RBP39.58■■■■□ 3.93
MRPL28-204ENST00000441883 RXRBP28702 533 aa39.56■■■■□ 3.92
MRPL28-204ENST00000441883 RGPD8O14715 1765 aaPredicted RBP39.56■■■■□ 3.92
MRPL28-204ENST00000441883 POGKQ9P215 609 aa39.54■■■■□ 3.92
MRPL28-204ENST00000441883 TRAK1Q9UPV9 953 aa39.54■■■■□ 3.92
MRPL28-204ENST00000441883 NGLY1Q96IV0 654 aa39.52■■■■□ 3.92
MRPL28-204ENST00000441883 KIF1AQ12756 1690 aa39.51■■■■□ 3.92
MRPL28-204ENST00000441883 QTRT2Q9H974 415 aaKnown RBP39.49■■■■□ 3.91
MRPL28-204ENST00000441883 PHF8Q9UPP1 1060 aa39.48■■■■□ 3.91
MRPL28-204ENST00000441883 CDK12Q9NYV4 1490 aaPredicted RBP39.45■■■■□ 3.91
MRPL28-204ENST00000441883 KRT28Q7Z3Y7 464 aa39.45■■■■□ 3.91
MRPL28-204ENST00000441883 SPATA31A3Q5VYP0 1347 aa39.44■■■■□ 3.9
MRPL28-204ENST00000441883 ADGRB2O60241 1585 aa39.44■■■■□ 3.9
MRPL28-204ENST00000441883 FNBP4Q8N3X1 1017 aaPredicted RBP39.43■■■■□ 3.9
MRPL28-204ENST00000441883 USP32Q8NFA0 1604 aa39.42■■■■□ 3.9
MRPL28-204ENST00000441883 RBM6P78332 1123 aaKnown RBP39.4■■■■□ 3.9
MRPL28-204ENST00000441883 HIRIP3Q9BW71 556 aaPredicted RBP39.4■■■■□ 3.9
MRPL28-204ENST00000441883 MINK1Q8N4C8 1332 aaPredicted RBP39.4■■■■□ 3.9
MRPL28-204ENST00000441883 USP21Q9UK80 565 aa39.39■■■■□ 3.9
MRPL28-204ENST00000441883 ANKARQ7Z5J8 1434 aa39.39■■■■□ 3.9
MRPL28-204ENST00000441883 MARF1Q9Y4F3 1742 aaKnown RBP39.35■■■■□ 3.89
MRPL28-204ENST00000441883 PSME1Q06323 249 aa39.33■■■■□ 3.89
MRPL28-204ENST00000441883 PMFBP1Q8TBY8 1022 aa39.33■■■■□ 3.89
MRPL28-204ENST00000441883 PRR36Q9H6K5 1346 aa39.33■■■■□ 3.89
MRPL28-204ENST00000441883 ARHGEF28Q8N1W1 1705 aaKnown RBP39.32■■■■□ 3.89
MRPL28-204ENST00000441883 WASLO00401 505 aaPredicted RBP39.32■■■■□ 3.89
MRPL28-204ENST00000441883 RGS12O14924 1447 aa39.31■■■■□ 3.88
MRPL28-204ENST00000441883 UPF1Q92900 1129 aaKnown RBP eCLIP39.31■■■■□ 3.88
MRPL28-204ENST00000441883 TRPC5Q9UL62 973 aaPredicted RBP39.3■■■■□ 3.88
MRPL28-204ENST00000441883 SBNO1A3KN83 1393 aa39.29■■■■□ 3.88
MRPL28-204ENST00000441883 TNS3Q68CZ2 1445 aa39.29■■■■□ 3.88
MRPL28-204ENST00000441883 KIAA1210Q9ULL0 1709 aa39.28■■■■□ 3.88
MRPL28-204ENST00000441883 BCL9LQ86UU0 1499 aa39.28■■■■□ 3.88
MRPL28-204ENST00000441883 TULP4Q9NRJ4 1543 aa39.26■■■■□ 3.88
MRPL28-204ENST00000441883 ATRNO75882 1429 aa39.26■■■■□ 3.88
MRPL28-204ENST00000441883 EIF3AQ14152 1382 aaKnown RBP39.25■■■■□ 3.87
MRPL28-204ENST00000441883 NBPF1Q3BBV0 1214 aa39.24■■■■□ 3.87
MRPL28-204ENST00000441883 CABLES1Q8TDN4 633 aa39.22■■■■□ 3.87
MRPL28-204ENST00000441883 LMOD2Q6P5Q4 547 aa39.18■■■■□ 3.86
MRPL28-204ENST00000441883 TRPM3Q9HCF6 1732 aaPredicted RBP39.17■■■■□ 3.86
MRPL28-204ENST00000441883 SLIT2O94813 1529 aa39.17■■■■□ 3.86
MRPL28-204ENST00000441883 ARHGEF10O15013 1369 aa39.17■■■■□ 3.86
MRPL28-204ENST00000441883 L3MBTL2Q969R5 705 aa39.16■■■■□ 3.86
MRPL28-204ENST00000441883 SIN3AQ96ST3 1273 aa39.16■■■■□ 3.86
MRPL28-204ENST00000441883 NUDT16Q96DE0 195 aaKnown RBP39.14■■■■□ 3.86
MRPL28-204ENST00000441883 GPRASP1Q5JY77 1395 aa39.13■■■■□ 3.85
MRPL28-204ENST00000441883 PLEKHG5O94827 1062 aa39.13■■■■□ 3.85
MRPL28-204ENST00000441883 ATP7BP35670 1465 aa39.12■■■■□ 3.85
MRPL28-204ENST00000441883 ABCA3Q99758 1704 aa39.12■■■■□ 3.85
MRPL28-204ENST00000441883 TNKS1BP1Q9C0C2 1729 aaKnown RBP39.12■■■■□ 3.85
MRPL28-204ENST00000441883 UNC5CLQ8IV45 518 aa39.12■■■■□ 3.85
MRPL28-204ENST00000441883 CDK19Q9BWU1 502 aa39.12■■■■□ 3.85
MRPL28-204ENST00000441883 HAP1P54257 671 aaPredicted RBP39.11■■■■□ 3.85
MRPL28-204ENST00000441883 NGDNQ8NEJ9 315 aaKnown RBP39.1■■■■□ 3.85
MRPL28-204ENST00000441883 GJD4Q96KN9 370 aaPredicted RBP39.1■■■■□ 3.85
MRPL28-204ENST00000441883 ALS2Q96Q42 1657 aa39.09■■■■□ 3.85
MRPL28-204ENST00000441883 ITSN1Q15811 1721 aa39.06■■■■□ 3.84
MRPL28-204ENST00000441883 NEUROD1Q13562 356 aa39.02■■■■□ 3.84
MRPL28-204ENST00000441883 GLI3P10071 1580 aa39.01■■■■□ 3.84
MRPL28-204ENST00000441883 FAM83GA6ND36 823 aa39.01■■■■□ 3.84
MRPL28-204ENST00000441883 RALGAPBQ86X10 1494 aa39■■■■□ 3.83
MRPL28-204ENST00000441883 CCDC61Q9Y6R9 512 aa39■■■■□ 3.83
MRPL28-204ENST00000441883 PLCH1Q4KWH8 1693 aa38.99■■■■□ 3.83
MRPL28-204ENST00000441883 CENPJQ9HC77 1338 aaPredicted RBP38.98■■■■□ 3.83
MRPL28-204ENST00000441883 TOPAZ1Q8N9V7 1692 aa38.98■■■■□ 3.83
MRPL28-204ENST00000441883 NWD2Q9ULI1 1742 aa38.97■■■■□ 3.83
MRPL28-204ENST00000441883 ATAD2Q6PL18 1390 aa38.97■■■■□ 3.83
MRPL28-204ENST00000441883 PAK3O75914 559 aaPredicted RBP38.97■■■■□ 3.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms