RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 VGFO15240 615 aaPredicted RBP15.3■□□□□ 0.04
SYN3-204ENST00000441821 NPHP3Q7Z494 1330 aa15.3■□□□□ 0.04
SYN3-204ENST00000441821 GJD4Q96KN9 370 aaPredicted RBP15.3■□□□□ 0.04
SYN3-204ENST00000441821 HFM1A2PYH4 1435 aa15.29■□□□□ 0.04
SYN3-204ENST00000441821 ITGAEP38570 1179 aa15.28■□□□□ 0.04
SYN3-204ENST00000441821 KIF1BO60333 1816 aa15.28■□□□□ 0.04
SYN3-204ENST00000441821 MARF1Q9Y4F3 1742 aaKnown RBP15.28■□□□□ 0.04
SYN3-204ENST00000441821 PXDNQ92626 1479 aa15.27■□□□□ 0.04
SYN3-204ENST00000441821 ESCO1Q5FWF5 840 aa15.27■□□□□ 0.04
SYN3-204ENST00000441821 BLMP54132 1417 aaPredicted RBP15.26■□□□□ 0.03
SYN3-204ENST00000441821 RPGRIP1LQ68CZ1 1315 aa15.25■□□□□ 0.03
SYN3-204ENST00000441821 LRPPRCP42704 1394 aaKnown RBP15.24■□□□□ 0.03
SYN3-204ENST00000441821 CDC42BPGQ6DT37 1551 aa15.24■□□□□ 0.03
SYN3-204ENST00000441821 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.24■□□□□ 0.03
SYN3-204ENST00000441821 FOXO3O43524 673 aa15.24■□□□□ 0.03
SYN3-204ENST00000441821 UNC5CLQ8IV45 518 aa15.24■□□□□ 0.03
SYN3-204ENST00000441821 SLIT2O94813 1529 aa15.22■□□□□ 0.03
SYN3-204ENST00000441821 RALGAPBQ86X10 1494 aa15.22■□□□□ 0.03
SYN3-204ENST00000441821 XPCQ01831 940 aaPredicted RBP15.22■□□□□ 0.03
SYN3-204ENST00000441821 GLI3P10071 1580 aa15.22■□□□□ 0.03
SYN3-204ENST00000441821 DEFB132Q7Z7B7 95 aa15.2■□□□□ 0.02
SYN3-204ENST00000441821 NAIPQ13075 1403 aa15.19■□□□□ 0.02
SYN3-204ENST00000441821 SF3B2Q13435 895 aaKnown RBP15.19■□□□□ 0.02
SYN3-204ENST00000441821 SPATA31A3Q5VYP0 1347 aa15.18■□□□□ 0.02
SYN3-204ENST00000441821 PPLO60437 1756 aa15.18■□□□□ 0.02
SYN3-204ENST00000441821 LRP5O75197 1615 aa15.17■□□□□ 0.02
SYN3-204ENST00000441821 BRWD3Q6RI45 1802 aa15.17■□□□□ 0.02
SYN3-204ENST00000441821 ONECUT3O60422 494 aaPredicted RBP15.17■□□□□ 0.02
SYN3-204ENST00000441821 SEPT12Q8IYM1 358 aa15.17■□□□□ 0.02
SYN3-204ENST00000441821 CCDC144AA2RUR9 1427 aa15.16■□□□□ 0.02
SYN3-204ENST00000441821 TECPR2O15040 1411 aa15.16■□□□□ 0.02
SYN3-204ENST00000441821 USP32Q8NFA0 1604 aa15.15■□□□□ 0.02
SYN3-204ENST00000441821 NUTM2FA1L443 756 aa15.15■□□□□ 0.02
SYN3-204ENST00000441821 VPS72Q15906 364 aa15.15■□□□□ 0.02
SYN3-204ENST00000441821 WAPLQ7Z5K2 1190 aa15.15■□□□□ 0.02
SYN3-204ENST00000441821 KRT28Q7Z3Y7 464 aa15.14■□□□□ 0.01
SYN3-204ENST00000441821 KIF1AQ12756 1690 aa15.13■□□□□ 0.01
SYN3-204ENST00000441821 KRT27Q7Z3Y8 459 aa15.13■□□□□ 0.01
SYN3-204ENST00000441821 STK26Q9P289 416 aa15.13■□□□□ 0.01
SYN3-204ENST00000441821 ABCC11Q96J66 1382 aa15.12■□□□□ 0.01
SYN3-204ENST00000441821 ADGRF5Q8IZF2 1346 aa15.12■□□□□ 0.01
SYN3-204ENST00000441821 FMN2Q9NZ56 1722 aa15.12■□□□□ 0.01
SYN3-204ENST00000441821 HAP1P54257 671 aaPredicted RBP15.11■□□□□ 0.01
SYN3-204ENST00000441821 SLC4A1APQ9BWU0 796 aaKnown RBP15.11■□□□□ 0.01
SYN3-204ENST00000441821 NWD2Q9ULI1 1742 aa15.11■□□□□ 0.01
SYN3-204ENST00000441821 PLEKHH1Q9ULM0 1364 aa15.11■□□□□ 0.01
SYN3-204ENST00000441821 TNS3Q68CZ2 1445 aa15.1■□□□□ 0.01
SYN3-204ENST00000441821 RRBP1Q9P2E9 1410 aaKnown RBP15.1■□□□□ 0.01
SYN3-204ENST00000441821 HRCP23327 699 aa15.1■□□□□ 0.01
SYN3-204ENST00000441821 BAG6P46379 1132 aa15.1■□□□□ 0.01
SYN3-204ENST00000441821 PSME1Q06323 249 aa15.1■□□□□ 0.01
SYN3-204ENST00000441821 CCDC9Q9Y3X0 531 aaKnown RBP15.1■□□□□ 0.01
SYN3-204ENST00000441821 KNDC1Q76NI1 1749 aa15.09■□□□□ 0.01
SYN3-204ENST00000441821 CABLES1Q8TDN4 633 aa15.09■□□□□ 0.01
SYN3-204ENST00000441821 PLCH1Q4KWH8 1693 aa15.09■□□□□ 0.01
SYN3-204ENST00000441821 PSDA5PKW4 1024 aaPredicted RBP15.08■□□□□ 0
SYN3-204ENST00000441821 TMEM132EQ6IEE7 984 aa15.08■□□□□ 0
SYN3-204ENST00000441821 PPARGC1BQ86YN6 1023 aaKnown RBP15.08■□□□□ 0
SYN3-204ENST00000441821 SIRT1Q96EB6 747 aa15.08■□□□□ 0
SYN3-204ENST00000441821 PHF8Q9UPP1 1060 aa15.08■□□□□ 0
SYN3-204ENST00000441821 SBNO1A3KN83 1393 aa15.08■□□□□ 0
SYN3-204ENST00000441821 ANKRD30BQ9BXX2 1392 aa15.08■□□□□ 0
SYN3-204ENST00000441821 FAM83GA6ND36 823 aa15.06■□□□□ 0
SYN3-204ENST00000441821 ARHGEF10O15013 1369 aa15.06■□□□□ 0
SYN3-204ENST00000441821 RGL3Q3MIN7 710 aa15.05■□□□□ -0
SYN3-204ENST00000441821 SPATA31E1Q6ZUB1 1445 aa15.05■□□□□ -0
SYN3-204ENST00000441821 YTHDC2Q9H6S0 1430 aaKnown RBP15.05■□□□□ -0
SYN3-204ENST00000441821 ABCA3Q99758 1704 aa15.04■□□□□ -0
SYN3-204ENST00000441821 IFT172Q9UG01 1749 aa15.04■□□□□ -0
SYN3-204ENST00000441821 NRXN1Q9ULB1 1477 aa15.04■□□□□ -0
SYN3-204ENST00000441821 PIK3C2GO75747 1445 aa15.04■□□□□ -0
SYN3-204ENST00000441821 RGPD8O14715 1765 aaPredicted RBP15.03■□□□□ -0
SYN3-204ENST00000441821 A0A0G2JS52 829 aa15.03■□□□□ -0
SYN3-204ENST00000441821 PLEKHG5O94827 1062 aa15.03■□□□□ -0
SYN3-204ENST00000441821 MYT1Q01538 1121 aa15.03■□□□□ -0
SYN3-204ENST00000441821 FAM98CQ17RN3 349 aaKnown RBP15.03■□□□□ -0
SYN3-204ENST00000441821 LMOD2Q6P5Q4 547 aa15.03■□□□□ -0
SYN3-204ENST00000441821 EN1Q05925 392 aaPredicted RBP15.02■□□□□ -0
SYN3-204ENST00000441821 RGPD1P0DJD0 1748 aa15.01□□□□□ -0.01
SYN3-204ENST00000441821 NRAPQ86VF7 1730 aa15.01□□□□□ -0.01
SYN3-204ENST00000441821 BTG4Q9NY30 223 aa15.01□□□□□ -0.01
SYN3-204ENST00000441821 DISP2A7MBM2 1401 aa15□□□□□ -0.01
SYN3-204ENST00000441821 R3HDM1Q15032 1099 aaKnown RBP15□□□□□ -0.01
SYN3-204ENST00000441821 C14orf93Q9H972 538 aaKnown RBP15□□□□□ -0.01
SYN3-204ENST00000441821 COL14A1Q05707 1796 aaKnown RBP14.98□□□□□ -0.01
SYN3-204ENST00000441821 DHX57Q6P158 1386 aaKnown RBP14.98□□□□□ -0.01
SYN3-204ENST00000441821 SPATA31A5Q5VU36 1347 aa14.97□□□□□ -0.01
SYN3-204ENST00000441821 SPATA31A7Q8IWB4 1347 aa14.97□□□□□ -0.01
SYN3-204ENST00000441821 FAM182BQ5T319 152 aa14.97□□□□□ -0.01
SYN3-204ENST00000441821 PMFBP1Q8TBY8 1022 aa14.97□□□□□ -0.01
SYN3-204ENST00000441821 ANKARQ7Z5J8 1434 aa14.97□□□□□ -0.01
SYN3-204ENST00000441821 PRAM1Q96QH2 718 aa14.96□□□□□ -0.01
SYN3-204ENST00000441821 TNS1Q9HBL0 1735 aaKnown RBP14.95□□□□□ -0.02
SYN3-204ENST00000441821 TRPM3Q9HCF6 1732 aaPredicted RBP14.95□□□□□ -0.02
SYN3-204ENST00000441821 EZH2Q15910 746 aaKnown RBP14.95□□□□□ -0.02
SYN3-204ENST00000441821 ALS2Q96Q42 1657 aa14.94□□□□□ -0.02
SYN3-204ENST00000441821 THSD7AQ9UPZ6 1657 aa14.94□□□□□ -0.02
SYN3-204ENST00000441821 SAFB2Q14151 953 aaKnown RBP eCLIP14.94□□□□□ -0.02
SYN3-204ENST00000441821 CFAP70Q5T0N1 1121 aa14.94□□□□□ -0.02
SYN3-204ENST00000441821 CAMKK2Q96RR4 588 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms