RNA–Protein interactions for RNA: ENST00000441730.2

BRPF3-204, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 3,329 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-204ENST00000441730 USP47Q96K76 1375 aa13.71□□□□□ -0.21
BRPF3-204ENST00000441730 STAC3Q96MF2 364 aa13.71□□□□□ -0.21
BRPF3-204ENST00000441730 PRDM4Q9UKN5 801 aa13.71□□□□□ -0.21
BRPF3-204ENST00000441730 SPATA31E1Q6ZUB1 1445 aa13.71□□□□□ -0.21
BRPF3-204ENST00000441730 DEPDC5O75140 1603 aa13.7□□□□□ -0.22
BRPF3-204ENST00000441730 RPGRIP1LQ68CZ1 1315 aa13.7□□□□□ -0.22
BRPF3-204ENST00000441730 FAM43AQ8N2R8 423 aa13.7□□□□□ -0.22
BRPF3-204ENST00000441730 VWDEQ8N2E2 1590 aa13.7□□□□□ -0.22
BRPF3-204ENST00000441730 BCORL1Q5H9F3 1711 aa13.7□□□□□ -0.22
BRPF3-204ENST00000441730 PROSER2Q86WR7 435 aaPredicted RBP13.7□□□□□ -0.22
BRPF3-204ENST00000441730 C14orf93Q9H972 538 aaKnown RBP13.69□□□□□ -0.22
BRPF3-204ENST00000441730 TRPM2O94759 1503 aa13.69□□□□□ -0.22
BRPF3-204ENST00000441730 SYNMO15061 1565 aa13.69□□□□□ -0.22
BRPF3-204ENST00000441730 LMTK2Q8IWU2 1503 aa13.69□□□□□ -0.22
BRPF3-204ENST00000441730 KCNA6P17658 529 aa13.69□□□□□ -0.22
BRPF3-204ENST00000441730 CABP2Q9NPB3 220 aa13.69□□□□□ -0.22
BRPF3-204ENST00000441730 A2ML1A8K2U0 1454 aa13.68□□□□□ -0.22
BRPF3-204ENST00000441730 FKBP8Q14318 412 aa13.68□□□□□ -0.22
BRPF3-204ENST00000441730 SPHKAPQ2M3C7 1700 aa13.67□□□□□ -0.22
BRPF3-204ENST00000441730 REREQ9P2R6 1566 aa13.67□□□□□ -0.22
BRPF3-204ENST00000441730 LMOD2Q6P5Q4 547 aa13.67□□□□□ -0.22
BRPF3-204ENST00000441730 WASHC2AQ641Q2 1341 aa13.67□□□□□ -0.22
BRPF3-204ENST00000441730 NCLP19338 710 aaKnown RBP13.66□□□□□ -0.22
BRPF3-204ENST00000441730 BRPF3Q9ULD4 1205 aa13.66□□□□□ -0.22
BRPF3-204ENST00000441730 PRAG1Q86YV5 1406 aa13.66□□□□□ -0.22
BRPF3-204ENST00000441730 METP08581 1390 aa13.66□□□□□ -0.22
BRPF3-204ENST00000441730 SOX12O15370 315 aa13.66□□□□□ -0.22
BRPF3-204ENST00000441730 PREX1Q8TCU6 1659 aa13.65□□□□□ -0.22
BRPF3-204ENST00000441730 CENPJQ9HC77 1338 aaPredicted RBP13.65□□□□□ -0.22
BRPF3-204ENST00000441730 HSP90AA1P07900 732 aaKnown RBP13.65□□□□□ -0.22
BRPF3-204ENST00000441730 CNPY4Q8N129 248 aa13.65□□□□□ -0.22
BRPF3-204ENST00000441730 C3P01024 1663 aa13.64□□□□□ -0.23
BRPF3-204ENST00000441730 PIK3C2BO00750 1634 aa13.64□□□□□ -0.23
BRPF3-204ENST00000441730 TMF1P82094 1093 aa13.64□□□□□ -0.23
BRPF3-204ENST00000441730 SENP3-EIF4A1A0A087X0R7 540 aa13.64□□□□□ -0.23
BRPF3-204ENST00000441730 TNNT2P45379 298 aaPredicted RBP13.64□□□□□ -0.23
BRPF3-204ENST00000441730 PMFBP1Q8TBY8 1022 aa13.63□□□□□ -0.23
BRPF3-204ENST00000441730 ZNF335Q9H4Z2 1342 aaPredicted RBP13.63□□□□□ -0.23
BRPF3-204ENST00000441730 RGS3P49796 1198 aa13.62□□□□□ -0.23
BRPF3-204ENST00000441730 XPCQ01831 940 aaPredicted RBP13.62□□□□□ -0.23
BRPF3-204ENST00000441730 SETD1BQ9UPS6 1966 aaKnown RBP13.62□□□□□ -0.23
BRPF3-204ENST00000441730 NLRP1Q9C000 1473 aa13.61□□□□□ -0.23
BRPF3-204ENST00000441730 RNF216Q9NWF9 866 aaPredicted RBP13.61□□□□□ -0.23
BRPF3-204ENST00000441730 PLEKHH1Q9ULM0 1364 aa13.6□□□□□ -0.23
BRPF3-204ENST00000441730 KIF1BO60333 1816 aa13.6□□□□□ -0.23
BRPF3-204ENST00000441730 ZBTB7CA1YPR0 619 aa13.6□□□□□ -0.23
BRPF3-204ENST00000441730 SPATA31D1Q6ZQQ2 1576 aa13.6□□□□□ -0.23
BRPF3-204ENST00000441730 SLC12A5Q9H2X9 1139 aa13.6□□□□□ -0.23
BRPF3-204ENST00000441730 PAK3O75914 559 aaPredicted RBP13.59□□□□□ -0.23
BRPF3-204ENST00000441730 CC2D1BQ5T0F9 858 aaKnown RBP13.59□□□□□ -0.23
BRPF3-204ENST00000441730 CCDC9Q9Y3X0 531 aaKnown RBP13.59□□□□□ -0.23
BRPF3-204ENST00000441730 NEFMP07197 916 aa13.59□□□□□ -0.23
BRPF3-204ENST00000441730 CDK19Q9BWU1 502 aa13.59□□□□□ -0.23
BRPF3-204ENST00000441730 TBX22Q9Y458 520 aa13.59□□□□□ -0.23
BRPF3-204ENST00000441730 ZC3H13Q5T200 1668 aaKnown RBP13.58□□□□□ -0.23
BRPF3-204ENST00000441730 PPM1GO15355 546 aaPredicted RBP13.58□□□□□ -0.24
BRPF3-204ENST00000441730 PIP4K2BP78356 416 aa13.58□□□□□ -0.24
BRPF3-204ENST00000441730 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.58□□□□□ -0.24
BRPF3-204ENST00000441730 ADAMTSL3P82987 1691 aa13.58□□□□□ -0.24
BRPF3-204ENST00000441730 SCAF11Q99590 1463 aaKnown RBP13.58□□□□□ -0.24
BRPF3-204ENST00000441730 KIF7Q2M1P5 1343 aa13.58□□□□□ -0.24
BRPF3-204ENST00000441730 USP35Q9P2H5 1018 aa13.57□□□□□ -0.24
BRPF3-204ENST00000441730 MROH2AA6NES4 1674 aa13.57□□□□□ -0.24
BRPF3-204ENST00000441730 MYO5BQ9ULV0 1848 aa13.57□□□□□ -0.24
BRPF3-204ENST00000441730 NUTM2GQ5VZR2 741 aa13.57□□□□□ -0.24
BRPF3-204ENST00000441730 TMEM132AQ24JP5 1023 aa13.56□□□□□ -0.24
BRPF3-204ENST00000441730 ESCO1Q5FWF5 840 aa13.56□□□□□ -0.24
BRPF3-204ENST00000441730 NGDNQ8NEJ9 315 aaKnown RBP13.56□□□□□ -0.24
BRPF3-204ENST00000441730 CEP170BQ9Y4F5 1589 aaPredicted RBP13.56□□□□□ -0.24
BRPF3-204ENST00000441730 ADGRB3O60242 1522 aa13.56□□□□□ -0.24
BRPF3-204ENST00000441730 NPHP4O75161 1426 aaPredicted RBP13.56□□□□□ -0.24
BRPF3-204ENST00000441730 CABP1Q9NZU7 370 aa13.56□□□□□ -0.24
BRPF3-204ENST00000441730 EIF3AQ14152 1382 aaKnown RBP13.55□□□□□ -0.24
BRPF3-204ENST00000441730 PANK3Q9H999 370 aa13.55□□□□□ -0.24
BRPF3-204ENST00000441730 YTHDC2Q9H6S0 1430 aaKnown RBP13.55□□□□□ -0.24
BRPF3-204ENST00000441730 ATF3P18847 181 aa13.54□□□□□ -0.24
BRPF3-204ENST00000441730 EVC2Q86UK5 1308 aa13.54□□□□□ -0.24
BRPF3-204ENST00000441730 DDX17Q92841 729 aaKnown RBP13.54□□□□□ -0.24
BRPF3-204ENST00000441730 TMEM131LA2VDJ0 1609 aa13.54□□□□□ -0.24
BRPF3-204ENST00000441730 PIK3C2GO75747 1445 aa13.54□□□□□ -0.24
BRPF3-204ENST00000441730 DISP3Q9P2K9 1392 aa13.53□□□□□ -0.24
BRPF3-204ENST00000441730 WWC1Q8IX03 1113 aa13.53□□□□□ -0.24
BRPF3-204ENST00000441730 TESK2Q96S53 571 aa13.53□□□□□ -0.24
BRPF3-204ENST00000441730 ROBO2Q9HCK4 1378 aa13.53□□□□□ -0.24
BRPF3-204ENST00000441730 PLEKHG1Q9ULL1 1385 aa13.53□□□□□ -0.24
BRPF3-204ENST00000441730 NEXMIFQ5QGS0 1516 aa13.52□□□□□ -0.24
BRPF3-204ENST00000441730 ZFYVE9O95405 1425 aa13.52□□□□□ -0.24
BRPF3-204ENST00000441730 FOXO3O43524 673 aa13.52□□□□□ -0.24
BRPF3-204ENST00000441730 TICAM2Q86XR7 235 aa13.51□□□□□ -0.25
BRPF3-204ENST00000441730 PRDM10Q9NQV6 1147 aa13.51□□□□□ -0.25
BRPF3-204ENST00000441730 DMRT2Q9Y5R5 561 aa13.51□□□□□ -0.25
BRPF3-204ENST00000441730 ANP32CO43423 234 aa13.51□□□□□ -0.25
BRPF3-204ENST00000441730 KNSTRNQ9Y448 316 aa13.51□□□□□ -0.25
BRPF3-204ENST00000441730 RALGAPBQ86X10 1494 aa13.51□□□□□ -0.25
BRPF3-204ENST00000441730 CDCA8Q53HL2 280 aa13.51□□□□□ -0.25
BRPF3-204ENST00000441730 NUDT16Q96DE0 195 aaKnown RBP13.51□□□□□ -0.25
BRPF3-204ENST00000441730 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.51□□□□□ -0.25
BRPF3-204ENST00000441730 ORAI2Q96SN7 254 aa13.5□□□□□ -0.25
BRPF3-204ENST00000441730 HMGB1P09429 215 aaKnown RBP13.49□□□□□ -0.25
BRPF3-204ENST00000441730 ADAMTS13Q76LX8 1427 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms