RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 CCDC144AA2RUR9 1427 aa29.81■■■□□ 2.36
UBE2F-215ENST00000441728 FOXD1Q16676 465 aa29.8■■■□□ 2.36
UBE2F-215ENST00000441728 RGL3Q3MIN7 710 aa29.8■■■□□ 2.36
UBE2F-215ENST00000441728 TRPC5Q9UL62 973 aaPredicted RBP29.8■■■□□ 2.36
UBE2F-215ENST00000441728 STK26Q9P289 416 aa29.79■■■□□ 2.36
UBE2F-215ENST00000441728 CDC42BPGQ6DT37 1551 aa29.76■■■□□ 2.35
UBE2F-215ENST00000441728 LRPPRCP42704 1394 aaKnown RBP29.76■■■□□ 2.35
UBE2F-215ENST00000441728 ATAD2Q6PL18 1390 aa29.75■■■□□ 2.35
UBE2F-215ENST00000441728 ADGRF5Q8IZF2 1346 aa29.73■■■□□ 2.35
UBE2F-215ENST00000441728 NUTM2FA1L443 756 aa29.73■■■□□ 2.35
UBE2F-215ENST00000441728 ANKRD30BQ9BXX2 1392 aa29.73■■■□□ 2.35
UBE2F-215ENST00000441728 FOXO3O43524 673 aa29.71■■■□□ 2.35
UBE2F-215ENST00000441728 XPCQ01831 940 aaPredicted RBP29.7■■■□□ 2.35
UBE2F-215ENST00000441728 FNBP4Q8N3X1 1017 aaPredicted RBP29.7■■■□□ 2.35
UBE2F-215ENST00000441728 COL22A1Q8NFW1 1626 aaPredicted RBP29.7■■■□□ 2.34
UBE2F-215ENST00000441728 WAPLQ7Z5K2 1190 aa29.69■■■□□ 2.34
UBE2F-215ENST00000441728 MPHOSPH9Q99550 1183 aa29.68■■■□□ 2.34
UBE2F-215ENST00000441728 TMEM132EQ6IEE7 984 aa29.65■■■□□ 2.34
UBE2F-215ENST00000441728 TECPR2O15040 1411 aa29.64■■■□□ 2.34
UBE2F-215ENST00000441728 MYOM2P54296 1465 aa29.64■■■□□ 2.34
UBE2F-215ENST00000441728 PXDNQ92626 1479 aa29.64■■■□□ 2.34
UBE2F-215ENST00000441728 ATRNO75882 1429 aa29.63■■■□□ 2.33
UBE2F-215ENST00000441728 ABCC11Q96J66 1382 aa29.63■■■□□ 2.33
UBE2F-215ENST00000441728 SPATA31E1Q6ZUB1 1445 aa29.62■■■□□ 2.33
UBE2F-215ENST00000441728 HAP1P54257 671 aaPredicted RBP29.61■■■□□ 2.33
UBE2F-215ENST00000441728 KNDC1Q76NI1 1749 aa29.6■■■□□ 2.33
UBE2F-215ENST00000441728 IFT172Q9UG01 1749 aa29.6■■■□□ 2.33
UBE2F-215ENST00000441728 ACIN1Q9UKV3 1341 aaKnown RBP29.59■■■□□ 2.33
UBE2F-215ENST00000441728 PIK3C2GO75747 1445 aa29.58■■■□□ 2.33
UBE2F-215ENST00000441728 YTHDC2Q9H6S0 1430 aaKnown RBP29.58■■■□□ 2.33
UBE2F-215ENST00000441728 PLEKHH1Q9ULM0 1364 aa29.58■■■□□ 2.33
UBE2F-215ENST00000441728 MARF1Q9Y4F3 1742 aaKnown RBP29.58■■■□□ 2.33
UBE2F-215ENST00000441728 KIF1AQ12756 1690 aa29.56■■■□□ 2.32
UBE2F-215ENST00000441728 FMN2Q9NZ56 1722 aa29.55■■■□□ 2.32
UBE2F-215ENST00000441728 GJD4Q96KN9 370 aaPredicted RBP29.55■■■□□ 2.32
UBE2F-215ENST00000441728 KRT28Q7Z3Y7 464 aa29.54■■■□□ 2.32
UBE2F-215ENST00000441728 BCL9LQ86UU0 1499 aa29.54■■■□□ 2.32
UBE2F-215ENST00000441728 DHX57Q6P158 1386 aaKnown RBP29.53■■■□□ 2.32
UBE2F-215ENST00000441728 SPATA31A3Q5VYP0 1347 aa29.53■■■□□ 2.32
UBE2F-215ENST00000441728 PSME1Q06323 249 aa29.53■■■□□ 2.32
UBE2F-215ENST00000441728 ZRANB1Q9UGI0 708 aa29.53■■■□□ 2.32
UBE2F-215ENST00000441728 CCDC125Q86Z20 511 aa29.52■■■□□ 2.32
UBE2F-215ENST00000441728 PLEKHG5O94827 1062 aa29.5■■■□□ 2.31
UBE2F-215ENST00000441728 UNC5CLQ8IV45 518 aa29.5■■■□□ 2.31
UBE2F-215ENST00000441728 SIRT1Q96EB6 747 aa29.5■■■□□ 2.31
UBE2F-215ENST00000441728 PHF8Q9UPP1 1060 aa29.5■■■□□ 2.31
UBE2F-215ENST00000441728 LMOD2Q6P5Q4 547 aa29.49■■■□□ 2.31
UBE2F-215ENST00000441728 C14orf93Q9H972 538 aaKnown RBP29.48■■■□□ 2.31
UBE2F-215ENST00000441728 SAFB2Q14151 953 aaKnown RBP eCLIP29.47■■■□□ 2.31
UBE2F-215ENST00000441728 POGKQ9P215 609 aa29.47■■■□□ 2.31
UBE2F-215ENST00000441728 CFAP70Q5T0N1 1121 aa29.46■■■□□ 2.31
UBE2F-215ENST00000441728 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.45■■■□□ 2.31
UBE2F-215ENST00000441728 CCDC9Q9Y3X0 531 aaKnown RBP29.45■■■□□ 2.31
UBE2F-215ENST00000441728 TNS3Q68CZ2 1445 aa29.45■■■□□ 2.3
UBE2F-215ENST00000441728 PRAM1Q96QH2 718 aa29.44■■■□□ 2.3
UBE2F-215ENST00000441728 USP32Q8NFA0 1604 aa29.43■■■□□ 2.3
UBE2F-215ENST00000441728 RALGAPBQ86X10 1494 aa29.42■■■□□ 2.3
UBE2F-215ENST00000441728 SLIT2O94813 1529 aa29.41■■■□□ 2.3
UBE2F-215ENST00000441728 SF3B2Q13435 895 aaKnown RBP29.41■■■□□ 2.3
UBE2F-215ENST00000441728 ARHGEF10O15013 1369 aa29.39■■■□□ 2.3
UBE2F-215ENST00000441728 RGPD8O14715 1765 aaPredicted RBP29.39■■■□□ 2.3
UBE2F-215ENST00000441728 CABLES1Q8TDN4 633 aa29.39■■■□□ 2.3
UBE2F-215ENST00000441728 NRXN1Q9ULB1 1477 aa29.37■■■□□ 2.29
UBE2F-215ENST00000441728 SBNO1A3KN83 1393 aa29.37■■■□□ 2.29
UBE2F-215ENST00000441728 A0A0G2JS52 829 aa29.36■■■□□ 2.29
UBE2F-215ENST00000441728 MYT1Q01538 1121 aa29.36■■■□□ 2.29
UBE2F-215ENST00000441728 PMFBP1Q8TBY8 1022 aa29.36■■■□□ 2.29
UBE2F-215ENST00000441728 GLI3P10071 1580 aa29.35■■■□□ 2.29
UBE2F-215ENST00000441728 BLMP54132 1417 aaPredicted RBP29.35■■■□□ 2.29
UBE2F-215ENST00000441728 VPS72Q15906 364 aa29.34■■■□□ 2.29
UBE2F-215ENST00000441728 SEPT12Q8IYM1 358 aa29.33■■■□□ 2.29
UBE2F-215ENST00000441728 ANKARQ7Z5J8 1434 aa29.33■■■□□ 2.29
UBE2F-215ENST00000441728 DLC1Q96QB1 1528 aa29.32■■■□□ 2.28
UBE2F-215ENST00000441728 EIF3AQ14152 1382 aaKnown RBP29.32■■■□□ 2.28
UBE2F-215ENST00000441728 GPRASP1Q5JY77 1395 aa29.31■■■□□ 2.28
UBE2F-215ENST00000441728 TRAK1Q9UPV9 953 aa29.31■■■□□ 2.28
UBE2F-215ENST00000441728 PLCH1Q4KWH8 1693 aa29.3■■■□□ 2.28
UBE2F-215ENST00000441728 NWD2Q9ULI1 1742 aa29.29■■■□□ 2.28
UBE2F-215ENST00000441728 HIRIP3Q9BW71 556 aaPredicted RBP29.29■■■□□ 2.28
UBE2F-215ENST00000441728 KDM2AQ9Y2K7 1162 aa29.29■■■□□ 2.28
UBE2F-215ENST00000441728 RAB3GAP2Q9H2M9 1393 aa29.28■■■□□ 2.28
UBE2F-215ENST00000441728 MINK1Q8N4C8 1332 aaPredicted RBP29.27■■■□□ 2.28
UBE2F-215ENST00000441728 KRT27Q7Z3Y8 459 aa29.26■■■□□ 2.27
UBE2F-215ENST00000441728 BRWD3Q6RI45 1802 aa29.25■■■□□ 2.27
UBE2F-215ENST00000441728 ABCA3Q99758 1704 aa29.25■■■□□ 2.27
UBE2F-215ENST00000441728 ADGRB2O60241 1585 aa29.24■■■□□ 2.27
UBE2F-215ENST00000441728 DCAF11Q8TEB1 546 aa29.24■■■□□ 2.27
UBE2F-215ENST00000441728 DEFB132Q7Z7B7 95 aa29.23■■■□□ 2.27
UBE2F-215ENST00000441728 NGDNQ8NEJ9 315 aaKnown RBP29.23■■■□□ 2.27
UBE2F-215ENST00000441728 EP400Q96L91 3159 aa29.23■■■□□ 2.27
UBE2F-215ENST00000441728 FAM83GA6ND36 823 aa29.22■■■□□ 2.27
UBE2F-215ENST00000441728 PAK3O75914 559 aaPredicted RBP29.21■■■□□ 2.27
UBE2F-215ENST00000441728 BTG4Q9NY30 223 aa29.2■■■□□ 2.26
UBE2F-215ENST00000441728 ADGRB1O14514 1584 aa29.19■■■□□ 2.26
UBE2F-215ENST00000441728 WASLO00401 505 aaPredicted RBP29.18■■■□□ 2.26
UBE2F-215ENST00000441728 ONECUT3O60422 494 aaPredicted RBP29.18■■■□□ 2.26
UBE2F-215ENST00000441728 FAM98CQ17RN3 349 aaKnown RBP29.18■■■□□ 2.26
UBE2F-215ENST00000441728 STAC3Q96MF2 364 aa29.18■■■□□ 2.26
UBE2F-215ENST00000441728 TULP4Q9NRJ4 1543 aa29.18■■■□□ 2.26
UBE2F-215ENST00000441728 BAG6P46379 1132 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms