RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 FOXD4L6Q3SYB3 417 aaPredicted RBP8.02□□□□□ -1.13
USP46-201ENST00000441222 FOXD4L3Q6VB84 417 aaPredicted RBP8.02□□□□□ -1.13
USP46-201ENST00000441222 MSH5O43196 834 aa8.02□□□□□ -1.13
USP46-201ENST00000441222 MIA2Q96PC5 1412 aa8.02□□□□□ -1.13
USP46-201ENST00000441222 MAGEC2Q9UBF1 373 aaPredicted RBP8.02□□□□□ -1.13
USP46-201ENST00000441222 VPS37CA5D8V6 355 aaPredicted RBP8.02□□□□□ -1.13
USP46-201ENST00000441222 VSIG10Q8N0Z9 540 aa8.02□□□□□ -1.13
USP46-201ENST00000441222 SDF4Q9BRK5 362 aa8.02□□□□□ -1.13
USP46-201ENST00000441222 PRDM2Q13029 1718 aa8.02□□□□□ -1.13
USP46-201ENST00000441222 DCAF8L1A6NGE4 600 aa8.01□□□□□ -1.13
USP46-201ENST00000441222 GOLGA6L10A6NI86 522 aa8.01□□□□□ -1.13
USP46-201ENST00000441222 MBD3O95983 291 aa8.01□□□□□ -1.13
USP46-201ENST00000441222 FBXO3Q9UK99 471 aa8.01□□□□□ -1.13
USP46-201ENST00000441222 SOGA1O94964 1423 aa8.01□□□□□ -1.13
USP46-201ENST00000441222 HMGN5P82970 282 aaKnown RBP8.01□□□□□ -1.13
USP46-201ENST00000441222 FAM13BQ9NYF5 915 aa8.01□□□□□ -1.13
USP46-201ENST00000441222 DZIP1LQ8IYY4 767 aaKnown RBP8.01□□□□□ -1.13
USP46-201ENST00000441222 TRAK1Q9UPV9 953 aa8.01□□□□□ -1.13
USP46-201ENST00000441222 LEKR1Q6ZMV7 388 aa8.01□□□□□ -1.13
USP46-201ENST00000441222 KINO60870 393 aaKnown RBP8□□□□□ -1.13
USP46-201ENST00000441222 RABEP1Q15276 862 aa8□□□□□ -1.13
USP46-201ENST00000441222 SEPT7Q16181 437 aaKnown RBP8□□□□□ -1.13
USP46-201ENST00000441222 L3MBTL2Q969R5 705 aa8□□□□□ -1.13
USP46-201ENST00000441222 ZNHIT6Q9NWK9 470 aaKnown RBP8□□□□□ -1.13
USP46-201ENST00000441222 CCAR1Q8IX12 1150 aaKnown RBP8□□□□□ -1.13
USP46-201ENST00000441222 CNTROBQ8N137 903 aa8□□□□□ -1.13
USP46-201ENST00000441222 PANK3Q9H999 370 aa8□□□□□ -1.13
USP46-201ENST00000441222 TSHZ2Q9NRE2 1034 aa8□□□□□ -1.13
USP46-201ENST00000441222 DIAPH1O60610 1272 aaKnown RBP8□□□□□ -1.13
USP46-201ENST00000441222 JMYQ8N9B5 988 aa8□□□□□ -1.13
USP46-201ENST00000441222 NEFHP12036 1026 aa8□□□□□ -1.13
USP46-201ENST00000441222 EZRP15311 586 aaKnown RBP8□□□□□ -1.13
USP46-201ENST00000441222 GNAI1P63096 354 aa8□□□□□ -1.13
USP46-201ENST00000441222 CDK5RAP3Q96JB5 506 aa8□□□□□ -1.13
USP46-201ENST00000441222 PAF1Q8N7H5 531 aa8□□□□□ -1.13
USP46-201ENST00000441222 PSME1Q06323 249 aa8□□□□□ -1.13
USP46-201ENST00000441222 CAVIN1Q6NZI2 390 aaKnown RBP8□□□□□ -1.13
USP46-201ENST00000441222 DESP17661 470 aa7.99□□□□□ -1.13
USP46-201ENST00000441222 STIM1Q13586 685 aa7.99□□□□□ -1.13
USP46-201ENST00000441222 TBC1D2BQ9UPU7 963 aa7.99□□□□□ -1.13
USP46-201ENST00000441222 FANCIQ9NVI1 1328 aa7.99□□□□□ -1.13
USP46-201ENST00000441222 FKBP5Q13451 457 aaPredicted RBP7.99□□□□□ -1.13
USP46-201ENST00000441222 PDIA4P13667 645 aaKnown RBP7.99□□□□□ -1.13
USP46-201ENST00000441222 EIF2S2P20042 333 aaKnown RBP7.99□□□□□ -1.13
USP46-201ENST00000441222 HMGB2P26583 209 aaKnown RBP7.99□□□□□ -1.13
USP46-201ENST00000441222 MRE11P49959 708 aa7.99□□□□□ -1.13
USP46-201ENST00000441222 INCENPQ9NQS7 918 aa7.99□□□□□ -1.13
USP46-201ENST00000441222 NASPP49321 788 aaPredicted RBP7.99□□□□□ -1.13
USP46-201ENST00000441222 RUNDC1Q96C34 613 aa7.98□□□□□ -1.13
USP46-201ENST00000441222 ZNF396Q96N95 335 aaPredicted RBP7.98□□□□□ -1.13
USP46-201ENST00000441222 DACH1Q9UI36 760 aa7.98□□□□□ -1.13
USP46-201ENST00000441222 PDILTQ8N807 584 aa7.98□□□□□ -1.13
USP46-201ENST00000441222 IQCEQ6IPM2 695 aa7.98□□□□□ -1.13
USP46-201ENST00000441222 FBXW7Q969H0 707 aa7.98□□□□□ -1.13
USP46-201ENST00000441222 RRP7AQ9Y3A4 280 aaKnown RBP7.98□□□□□ -1.13
USP46-201ENST00000441222 USP8P40818 1118 aa7.98□□□□□ -1.13
USP46-201ENST00000441222 CRBNQ96SW2 442 aa7.98□□□□□ -1.13
USP46-201ENST00000441222 CT47B1P0C2W7 299 aaPredicted RBP7.97□□□□□ -1.13
USP46-201ENST00000441222 KIAA0754O94854 1291 aa7.97□□□□□ -1.13
USP46-201ENST00000441222 HNRNPMP52272 730 aaKnown RBP eCLIP7.97□□□□□ -1.131e-7■■■□□ 14.8
USP46-201ENST00000441222 RIC3Q7Z5B4 369 aa7.97□□□□□ -1.13
USP46-201ENST00000441222 RAPGEF4Q8WZA2 1011 aa7.97□□□□□ -1.13
USP46-201ENST00000441222 TMEM132AQ24JP5 1023 aa7.97□□□□□ -1.13
USP46-201ENST00000441222 ELL2O00472 640 aaPredicted RBP7.97□□□□□ -1.13
USP46-201ENST00000441222 TRIM21P19474 475 aaKnown RBP7.97□□□□□ -1.13
USP46-201ENST00000441222 RIPK4P57078 832 aa7.97□□□□□ -1.13
USP46-201ENST00000441222 IKQ13123 557 aaPredicted RBP7.97□□□□□ -1.13
USP46-201ENST00000441222 DNAI2Q9GZS0 605 aa7.97□□□□□ -1.13
USP46-201ENST00000441222 COG6Q9Y2V7 657 aa7.97□□□□□ -1.13
USP46-201ENST00000441222 EIF3JO75822 258 aaKnown RBP7.97□□□□□ -1.13
USP46-201ENST00000441222 ERC1Q8IUD2 1116 aa7.97□□□□□ -1.13
USP46-201ENST00000441222 CLASRPQ8N2M8 674 aaKnown RBP7.97□□□□□ -1.13
USP46-201ENST00000441222 C22orf23Q9BZE7 217 aa7.97□□□□□ -1.13
USP46-201ENST00000441222 ST20-MTHFSA0A0A6YYL1 179 aa7.97□□□□□ -1.13
USP46-201ENST00000441222 ANKRD1Q15327 319 aa7.97□□□□□ -1.13
USP46-201ENST00000441222 TSPYL1Q9H0U9 437 aa7.97□□□□□ -1.13
USP46-201ENST00000441222 USP47Q96K76 1375 aa7.97□□□□□ -1.13
USP46-201ENST00000441222 MEX3CQ5U5Q3 659 aaKnown RBP7.96□□□□□ -1.13
USP46-201ENST00000441222 WASHC4Q2M389 1173 aa7.96□□□□□ -1.13
USP46-201ENST00000441222 TRIM5Q9C035 493 aa7.96□□□□□ -1.13
USP46-201ENST00000441222 BCL2L13Q9BXK5 485 aa7.96□□□□□ -1.13
USP46-201ENST00000441222 RAPGEF2Q9Y4G8 1499 aa7.96□□□□□ -1.13
USP46-201ENST00000441222 CCDC27Q2M243 656 aa7.96□□□□□ -1.14
USP46-201ENST00000441222 ABCC8Q09428 1581 aa7.96□□□□□ -1.14
USP46-201ENST00000441222 TSPYL4Q9UJ04 414 aa7.96□□□□□ -1.14
USP46-201ENST00000441222 CDC45O75419 566 aa7.96□□□□□ -1.14
USP46-201ENST00000441222 UBTFL1P0CB47 393 aaPredicted RBP7.96□□□□□ -1.14
USP46-201ENST00000441222 GBP2P32456 591 aaPredicted RBP7.96□□□□□ -1.14
USP46-201ENST00000441222 AXDND1Q5T1B0 1012 aaPredicted RBP7.96□□□□□ -1.14
USP46-201ENST00000441222 SYTL4Q96C24 671 aaPredicted RBP7.96□□□□□ -1.14
USP46-201ENST00000441222 GNAI3P08754 354 aa7.95□□□□□ -1.14
USP46-201ENST00000441222 GNL3LQ9NVN8 582 aaKnown RBP7.95□□□□□ -1.14
USP46-201ENST00000441222 NUTM2FA1L443 756 aa7.95□□□□□ -1.14
USP46-201ENST00000441222 ERLIN1O75477 346 aa7.95□□□□□ -1.14
USP46-201ENST00000441222 NEUROD6Q96NK8 337 aa7.94□□□□□ -1.14
USP46-201ENST00000441222 KRT18P05783 430 aaKnown RBP7.94□□□□□ -1.14
USP46-201ENST00000441222 KIF6Q6ZMV9 814 aa7.94□□□□□ -1.14
USP46-201ENST00000441222 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.94□□□□□ -1.14
USP46-201ENST00000441222 CUX1P39880 1505 aa7.94□□□□□ -1.14
USP46-201ENST00000441222 SMC2O95347 1197 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms