RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 MINK1Q8N4C8 1332 aaPredicted RBP21.01■□□□□ 0.95
PLOD3-205ENST00000440925 NKTRP30414 1462 aaKnown RBP21■□□□□ 0.95
PLOD3-205ENST00000440925 XIRP1Q702N8 1843 aaKnown RBP20.99■□□□□ 0.95
PLOD3-205ENST00000440925 NCOA3Q9Y6Q9 1424 aa20.95■□□□□ 0.95
PLOD3-205ENST00000440925 WASLO00401 505 aaPredicted RBP20.94■□□□□ 0.94
PLOD3-205ENST00000440925 CDK19Q9BWU1 502 aa20.94■□□□□ 0.94
PLOD3-205ENST00000440925 C19orf44Q9H6X5 657 aa20.94■□□□□ 0.94
PLOD3-205ENST00000440925 EIF3AQ14152 1382 aaKnown RBP20.94■□□□□ 0.94
PLOD3-205ENST00000440925 DISP3Q9P2K9 1392 aa20.94■□□□□ 0.94
PLOD3-205ENST00000440925 SBNO2Q9Y2G9 1366 aa20.94■□□□□ 0.94
PLOD3-205ENST00000440925 ADGRL3Q9HAR2 1447 aa20.92■□□□□ 0.94
PLOD3-205ENST00000440925 TULP4Q9NRJ4 1543 aa20.92■□□□□ 0.94
PLOD3-205ENST00000440925 QRICH2Q9H0J4 1663 aa20.91■□□□□ 0.94
PLOD3-205ENST00000440925 PRR36Q9H6K5 1346 aa20.91■□□□□ 0.94
PLOD3-205ENST00000440925 CABP2Q9NPB3 220 aa20.91■□□□□ 0.94
PLOD3-205ENST00000440925 NALCNQ8IZF0 1738 aa20.9■□□□□ 0.94
PLOD3-205ENST00000440925 CERKQ8TCT0 537 aa20.88■□□□□ 0.93
PLOD3-205ENST00000440925 NUTM2FA1L443 756 aa20.87■□□□□ 0.93
PLOD3-205ENST00000440925 WASHC2AQ641Q2 1341 aa20.86■□□□□ 0.93
PLOD3-205ENST00000440925 EVC2Q86UK5 1308 aa20.86■□□□□ 0.93
PLOD3-205ENST00000440925 ADGRB2O60241 1585 aa20.86■□□□□ 0.93
PLOD3-205ENST00000440925 C14orf37Q86TY3 774 aa20.86■□□□□ 0.93
PLOD3-205ENST00000440925 KIF7Q2M1P5 1343 aa20.85■□□□□ 0.93
PLOD3-205ENST00000440925 TMF1P82094 1093 aa20.85■□□□□ 0.93
PLOD3-205ENST00000440925 NUDT16Q96DE0 195 aaKnown RBP20.85■□□□□ 0.93
PLOD3-205ENST00000440925 PUS7Q96PZ0 661 aaKnown RBP20.84■□□□□ 0.93
PLOD3-205ENST00000440925 USP32Q8NFA0 1604 aa20.82■□□□□ 0.92
PLOD3-205ENST00000440925 ZNF316A6NFI3 1004 aaPredicted RBP20.82■□□□□ 0.92
PLOD3-205ENST00000440925 ORAI2Q96SN7 254 aa20.82■□□□□ 0.92
PLOD3-205ENST00000440925 MST1RQ04912 1400 aa20.81■□□□□ 0.92
PLOD3-205ENST00000440925 SRPK2P78362 688 aaKnown RBP20.81■□□□□ 0.92
PLOD3-205ENST00000440925 SLAIN2Q9P270 581 aa20.81■□□□□ 0.92
PLOD3-205ENST00000440925 MSH6P52701 1360 aa20.81■□□□□ 0.92
PLOD3-205ENST00000440925 CDC42BPGQ6DT37 1551 aa20.8■□□□□ 0.92
PLOD3-205ENST00000440925 SLC24A1O60721 1099 aa20.8■□□□□ 0.92
PLOD3-205ENST00000440925 ATF3P18847 181 aa20.8■□□□□ 0.92
PLOD3-205ENST00000440925 CADPS2Q86UW7 1296 aa20.8■□□□□ 0.92
PLOD3-205ENST00000440925 SLC12A5Q9H2X9 1139 aa20.8■□□□□ 0.92
PLOD3-205ENST00000440925 CCDC7Q96M83 1385 aa20.8■□□□□ 0.92
PLOD3-205ENST00000440925 DCCP43146 1447 aa20.79■□□□□ 0.92
PLOD3-205ENST00000440925 FMN2Q9NZ56 1722 aa20.79■□□□□ 0.92
PLOD3-205ENST00000440925 CABP1Q9NZU7 370 aa20.79■□□□□ 0.92
PLOD3-205ENST00000440925 C1orf167Q5SNV9 1468 aa20.79■□□□□ 0.92
PLOD3-205ENST00000440925 ATP7BP35670 1465 aa20.78■□□□□ 0.92
PLOD3-205ENST00000440925 PLEKHG3A1L390 1219 aa20.77■□□□□ 0.92
PLOD3-205ENST00000440925 CCDC61Q9Y6R9 512 aa20.77■□□□□ 0.92
PLOD3-205ENST00000440925 RGPD8O14715 1765 aaPredicted RBP20.76■□□□□ 0.91
PLOD3-205ENST00000440925 ANKARQ7Z5J8 1434 aa20.74■□□□□ 0.91
PLOD3-205ENST00000440925 PMFBP1Q8TBY8 1022 aa20.74■□□□□ 0.91
PLOD3-205ENST00000440925 IQSEC2Q5JU85 1478 aa20.74■□□□□ 0.91
PLOD3-205ENST00000440925 ESCO1Q5FWF5 840 aa20.73■□□□□ 0.91
PLOD3-205ENST00000440925 BRINP3Q76B58 766 aa20.73■□□□□ 0.91
PLOD3-205ENST00000440925 POLR3GLQ9BT43 218 aa20.73■□□□□ 0.91
PLOD3-205ENST00000440925 CD163L1Q9NR16 1453 aa20.73■□□□□ 0.91
PLOD3-205ENST00000440925 CDCA8Q53HL2 280 aa20.72■□□□□ 0.91
PLOD3-205ENST00000440925 DDX17Q92841 729 aaKnown RBP20.72■□□□□ 0.91
PLOD3-205ENST00000440925 CARD14Q9BXL6 1004 aa20.72■□□□□ 0.91
PLOD3-205ENST00000440925 PHF8Q9UPP1 1060 aa20.71■□□□□ 0.91
PLOD3-205ENST00000440925 PPIP5K1Q6PFW1 1433 aa20.7■□□□□ 0.9
PLOD3-205ENST00000440925 UBAP1LF5GYI3 381 aa20.7■□□□□ 0.9
PLOD3-205ENST00000440925 TMC1Q8TDI8 760 aa20.7■□□□□ 0.9
PLOD3-205ENST00000440925 ACEP12821 1306 aa20.7■□□□□ 0.9
PLOD3-205ENST00000440925 ATAD2Q6PL18 1390 aa20.7■□□□□ 0.9
PLOD3-205ENST00000440925 TOPAZ1Q8N9V7 1692 aa20.68■□□□□ 0.9
PLOD3-205ENST00000440925 PER1O15534 1290 aaPredicted RBP20.68■□□□□ 0.9
PLOD3-205ENST00000440925 TOM1O60784 492 aa20.68■□□□□ 0.9
PLOD3-205ENST00000440925 PANK3Q9H999 370 aa20.68■□□□□ 0.9
PLOD3-205ENST00000440925 CPSF1Q10570 1443 aaKnown RBP20.68■□□□□ 0.9
PLOD3-205ENST00000440925 FOXO3O43524 673 aa20.67■□□□□ 0.9
PLOD3-205ENST00000440925 POLR3AO14802 1390 aaPredicted RBP20.67■□□□□ 0.9
PLOD3-205ENST00000440925 MYOM1P52179 1685 aa20.67■□□□□ 0.9
PLOD3-205ENST00000440925 DDX10Q13206 875 aaKnown RBP20.66■□□□□ 0.9
PLOD3-205ENST00000440925 ILDR1Q86SU0 546 aaPredicted RBP20.65■□□□□ 0.9
PLOD3-205ENST00000440925 PIP4K2BP78356 416 aa20.64■□□□□ 0.89
PLOD3-205ENST00000440925 SSH2Q76I76 1423 aa20.63■□□□□ 0.89
PLOD3-205ENST00000440925 A0A1W2PP64 1363 aa20.62■□□□□ 0.89
PLOD3-205ENST00000440925 XPCQ01831 940 aaPredicted RBP20.62■□□□□ 0.89
PLOD3-205ENST00000440925 NGDNQ8NEJ9 315 aaKnown RBP20.62■□□□□ 0.89
PLOD3-205ENST00000440925 ANKRD36BQ8N2N9 1353 aa20.6■□□□□ 0.89
PLOD3-205ENST00000440925 KRT28Q7Z3Y7 464 aa20.6■□□□□ 0.89
PLOD3-205ENST00000440925 ZNF692Q9BU19 519 aaPredicted RBP20.6■□□□□ 0.89
PLOD3-205ENST00000440925 NINLQ9Y2I6 1382 aa20.59■□□□□ 0.89
PLOD3-205ENST00000440925 SOS2Q07890 1332 aaPredicted RBP20.58■□□□□ 0.89
PLOD3-205ENST00000440925 ROBO1Q9Y6N7 1651 aa20.58■□□□□ 0.89
PLOD3-205ENST00000440925 PSME1Q06323 249 aa20.58■□□□□ 0.89
PLOD3-205ENST00000440925 TERF2IPQ9NYB0 399 aa20.58■□□□□ 0.89
PLOD3-205ENST00000440925 ZRANB1Q9UGI0 708 aa20.58■□□□□ 0.89
PLOD3-205ENST00000440925 KTN1Q86UP2 1357 aaKnown RBP20.57■□□□□ 0.88
PLOD3-205ENST00000440925 PXDNQ92626 1479 aa20.56■□□□□ 0.88
PLOD3-205ENST00000440925 TTC21BQ7Z4L5 1316 aa20.56■□□□□ 0.88
PLOD3-205ENST00000440925 USP6P35125 1406 aa20.56■□□□□ 0.88
PLOD3-205ENST00000440925 ITSN1Q15811 1721 aa20.56■□□□□ 0.88
PLOD3-205ENST00000440925 AKAP12Q02952 1782 aa20.55■□□□□ 0.88
PLOD3-205ENST00000440925 HDGFL2Q7Z4V5 671 aaPredicted RBP20.55■□□□□ 0.88
PLOD3-205ENST00000440925 FYB1O15117 783 aa20.54■□□□□ 0.88
PLOD3-205ENST00000440925 AMER1Q5JTC6 1135 aaPredicted RBP20.54■□□□□ 0.88
PLOD3-205ENST00000440925 NPHP3Q7Z494 1330 aa20.53■□□□□ 0.88
PLOD3-205ENST00000440925 KIF1AQ12756 1690 aa20.52■□□□□ 0.88
PLOD3-205ENST00000440925 NME9Q86XW9 330 aa20.52■□□□□ 0.88
PLOD3-205ENST00000440925 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms