RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 VWDEQ8N2E2 1590 aa7.29□□□□□ -1.24
CCDC140-202ENST00000440903 CLTCQ00610 1675 aaKnown RBP7.28□□□□□ -1.24
CCDC140-202ENST00000440903 SIGLEC1Q9BZZ2 1709 aa7.28□□□□□ -1.24
CCDC140-202ENST00000440903 RIMS1Q86UR5 1692 aaKnown RBP7.28□□□□□ -1.24
CCDC140-202ENST00000440903 CIZ1Q9ULV3 898 aaPredicted RBP7.27□□□□□ -1.25
CCDC140-202ENST00000440903 PZPP20742 1482 aa7.27□□□□□ -1.25
CCDC140-202ENST00000440903 ADAMTSL3P82987 1691 aa7.27□□□□□ -1.25
CCDC140-202ENST00000440903 ARHGAP31Q2M1Z3 1444 aa7.27□□□□□ -1.25
CCDC140-202ENST00000440903 CCER1Q8TC90 406 aaPredicted RBP7.25□□□□□ -1.25
CCDC140-202ENST00000440903 MPHOSPH9Q99550 1183 aa7.25□□□□□ -1.25
CCDC140-202ENST00000440903 CCDC144AA2RUR9 1427 aa7.25□□□□□ -1.25
CCDC140-202ENST00000440903 SPHKAPQ2M3C7 1700 aa7.24□□□□□ -1.25
CCDC140-202ENST00000440903 TRPM2O94759 1503 aa7.24□□□□□ -1.25
CCDC140-202ENST00000440903 PKD2Q13563 968 aa7.24□□□□□ -1.25
CCDC140-202ENST00000440903 E9PCH4 1651 aa7.24□□□□□ -1.25
CCDC140-202ENST00000440903 NPATQ14207 1427 aa7.24□□□□□ -1.25
CCDC140-202ENST00000440903 ERVK-7P63135 1459 aa7.24□□□□□ -1.25
CCDC140-202ENST00000440903 ZMYM3Q14202 1370 aa7.23□□□□□ -1.25
CCDC140-202ENST00000440903 DHX57Q6P158 1386 aaKnown RBP7.23□□□□□ -1.25
CCDC140-202ENST00000440903 TNRQ92752 1358 aa7.23□□□□□ -1.25
CCDC140-202ENST00000440903 C3P01024 1663 aa7.23□□□□□ -1.25
CCDC140-202ENST00000440903 PREX1Q8TCU6 1659 aa7.23□□□□□ -1.25
CCDC140-202ENST00000440903 ZNF687Q8N1G0 1237 aa7.23□□□□□ -1.25
CCDC140-202ENST00000440903 SPATA31D1Q6ZQQ2 1576 aa7.23□□□□□ -1.25
CCDC140-202ENST00000440903 CLSPNQ9HAW4 1339 aa7.23□□□□□ -1.25
CCDC140-202ENST00000440903 PTPRMP28827 1452 aa7.23□□□□□ -1.25
CCDC140-202ENST00000440903 PTGER2P43116 358 aa7.22□□□□□ -1.25
CCDC140-202ENST00000440903 NLRP1Q9C000 1473 aa7.22□□□□□ -1.25
CCDC140-202ENST00000440903 UHRF1BP1Q6BDS2 1440 aa7.21□□□□□ -1.25
CCDC140-202ENST00000440903 MYO3AQ8NEV4 1616 aa7.21□□□□□ -1.26
CCDC140-202ENST00000440903 ANKRD13DQ6ZTN6 518 aa7.21□□□□□ -1.26
CCDC140-202ENST00000440903 ZSWIM6Q9HCJ5 1215 aa7.21□□□□□ -1.26
CCDC140-202ENST00000440903 NOS1P29475 1434 aa7.2□□□□□ -1.26
CCDC140-202ENST00000440903 EFCAB3Q8N7B9 438 aa7.2□□□□□ -1.26
CCDC140-202ENST00000440903 SPOCK2Q92563 424 aa7.2□□□□□ -1.26
CCDC140-202ENST00000440903 SLC52A1Q9NWF4 448 aa7.2□□□□□ -1.26
CCDC140-202ENST00000440903 ADGRB3O60242 1522 aa7.2□□□□□ -1.26
CCDC140-202ENST00000440903 PTPRTO14522 1441 aa7.19□□□□□ -1.26
CCDC140-202ENST00000440903 SYNMO15061 1565 aa7.19□□□□□ -1.26
CCDC140-202ENST00000440903 TONSLQ96HA7 1378 aa7.19□□□□□ -1.26
CCDC140-202ENST00000440903 ZNF142P52746 1687 aaPredicted RBP7.19□□□□□ -1.26
CCDC140-202ENST00000440903 CEP170BQ9Y4F5 1589 aaPredicted RBP7.18□□□□□ -1.26
CCDC140-202ENST00000440903 CHGAP10645 457 aaKnown RBP7.18□□□□□ -1.26
CCDC140-202ENST00000440903 CLTCL1P53675 1640 aa7.18□□□□□ -1.26
CCDC140-202ENST00000440903 KIF1BO60333 1816 aa7.17□□□□□ -1.26
CCDC140-202ENST00000440903 A2ML1A8K2U0 1454 aa7.17□□□□□ -1.26
CCDC140-202ENST00000440903 UGGT1Q9NYU2 1555 aa7.17□□□□□ -1.26
CCDC140-202ENST00000440903 PIK3C2BO00750 1634 aa7.17□□□□□ -1.26
CCDC140-202ENST00000440903 KDM5AP29375 1690 aaKnown RBP7.17□□□□□ -1.26
CCDC140-202ENST00000440903 MICALL2Q8IY33 904 aa7.17□□□□□ -1.26
CCDC140-202ENST00000440903 ANKRD30BQ9BXX2 1392 aa7.17□□□□□ -1.26
CCDC140-202ENST00000440903 NEURL4Q96JN8 1562 aa7.16□□□□□ -1.26
CCDC140-202ENST00000440903 CEBPAP49715 358 aaPredicted RBP7.16□□□□□ -1.26
CCDC140-202ENST00000440903 HDGFP51858 240 aaKnown RBP7.16□□□□□ -1.26
CCDC140-202ENST00000440903 ZNF326Q5BKZ1 582 aaKnown RBP7.16□□□□□ -1.26
CCDC140-202ENST00000440903 FBXO31Q5XUX0 539 aaPredicted RBP7.16□□□□□ -1.26
CCDC140-202ENST00000440903 GPR153Q6NV75 609 aa7.16□□□□□ -1.26
CCDC140-202ENST00000440903 KDM4FA0A1W2PPD8 638 aa7.15□□□□□ -1.26
CCDC140-202ENST00000440903 PPP1R15AO75807 674 aaPredicted RBP7.15□□□□□ -1.26
CCDC140-202ENST00000440903 TMEM92Q6UXU6 159 aa7.15□□□□□ -1.26
CCDC140-202ENST00000440903 ZEB1P37275 1124 aaPredicted RBP7.14□□□□□ -1.27
CCDC140-202ENST00000440903 PLA2R1Q13018 1463 aa7.14□□□□□ -1.27
CCDC140-202ENST00000440903 NEUROD1Q13562 356 aa7.14□□□□□ -1.27
CCDC140-202ENST00000440903 ARSIQ5FYB1 569 aa7.14□□□□□ -1.27
CCDC140-202ENST00000440903 THEMISQ8N1K5 641 aaPredicted RBP7.14□□□□□ -1.27
CCDC140-202ENST00000440903 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.14□□□□□ -1.27
CCDC140-202ENST00000440903 EID1Q9Y6B2 187 aa7.14□□□□□ -1.27
CCDC140-202ENST00000440903 UBR1Q8IWV7 1749 aa7.13□□□□□ -1.27
CCDC140-202ENST00000440903 TMEM131LA2VDJ0 1609 aa7.13□□□□□ -1.27
CCDC140-202ENST00000440903 RPGRIP1LQ68CZ1 1315 aa7.13□□□□□ -1.27
CCDC140-202ENST00000440903 STAC3Q96MF2 364 aa7.13□□□□□ -1.27
CCDC140-202ENST00000440903 TIMELESSQ9UNS1 1208 aa7.13□□□□□ -1.27
CCDC140-202ENST00000440903 MYOM2P54296 1465 aa7.12□□□□□ -1.27
CCDC140-202ENST00000440903 SPATA31E1Q6ZUB1 1445 aa7.12□□□□□ -1.27
CCDC140-202ENST00000440903 SETD1BQ9UPS6 1966 aaKnown RBP7.12□□□□□ -1.27
CCDC140-202ENST00000440903 CFAP65Q6ZU64 1925 aaKnown RBP7.12□□□□□ -1.27
CCDC140-202ENST00000440903 IDI1Q13907 227 aa7.12□□□□□ -1.27
CCDC140-202ENST00000440903 SLIT1O75093 1534 aa7.11□□□□□ -1.27
CCDC140-202ENST00000440903 SCAF11Q99590 1463 aaKnown RBP7.11□□□□□ -1.27
CCDC140-202ENST00000440903 RIMS2Q9UQ26 1411 aa7.11□□□□□ -1.27
CCDC140-202ENST00000440903 TMEM2Q9UHN6 1383 aa7.11□□□□□ -1.27
CCDC140-202ENST00000440903 ZNF316A6NFI3 1004 aaPredicted RBP7.11□□□□□ -1.27
CCDC140-202ENST00000440903 LSM11P83369 360 aaKnown RBP eCLIP7.11□□□□□ -1.27
CCDC140-202ENST00000440903 RGL3Q3MIN7 710 aa7.11□□□□□ -1.27
CCDC140-202ENST00000440903 BCANQ96GW7 911 aa7.11□□□□□ -1.27
CCDC140-202ENST00000440903 LAMC1P11047 1609 aa7.11□□□□□ -1.27
CCDC140-202ENST00000440903 LMTK3Q96Q04 1460 aa7.11□□□□□ -1.27
CCDC140-202ENST00000440903 POLR1AO95602 1720 aaPredicted RBP7.1□□□□□ -1.27
CCDC140-202ENST00000440903 VGFO15240 615 aaPredicted RBP7.1□□□□□ -1.27
CCDC140-202ENST00000440903 ANKLE2Q86XL3 938 aa7.1□□□□□ -1.27
CCDC140-202ENST00000440903 IFNLR1Q8IU57 520 aaPredicted RBP7.1□□□□□ -1.27
CCDC140-202ENST00000440903 SIN3AQ96ST3 1273 aa7.1□□□□□ -1.27
CCDC140-202ENST00000440903 PLA2G2EQ9NZK7 142 aa7.1□□□□□ -1.27
CCDC140-202ENST00000440903 NEXMIFQ5QGS0 1516 aa7.1□□□□□ -1.27
CCDC140-202ENST00000440903 ARHGAP23Q9P227 1491 aa7.1□□□□□ -1.27
CCDC140-202ENST00000440903 DIP2AQ14689 1571 aa7.09□□□□□ -1.27
CCDC140-202ENST00000440903 SOX12O15370 315 aa7.09□□□□□ -1.27
CCDC140-202ENST00000440903 DCAF11Q8TEB1 546 aa7.09□□□□□ -1.27
CCDC140-202ENST00000440903 KHSRPQ92945 711 aaKnown RBP eCLIP7.09□□□□□ -1.27
CCDC140-202ENST00000440903 PPLO60437 1756 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms