RNA–Protein interactions for RNA: ENST00000440813.1

TSSC4-206, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 3

Gene TSSC4, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-206ENST00000440813 POGKQ9P215 609 aa28.99■■■□□ 2.23
TSSC4-206ENST00000440813 CLSPNQ9HAW4 1339 aa28.98■■■□□ 2.23
TSSC4-206ENST00000440813 HSPA1LP34931 641 aa28.98■■■□□ 2.23
TSSC4-206ENST00000440813 DLC1Q96QB1 1528 aa28.97■■■□□ 2.23
TSSC4-206ENST00000440813 NBPF8Q3BBV2 869 aa28.96■■■□□ 2.23
TSSC4-206ENST00000440813 ROBO1Q9Y6N7 1651 aa28.96■■■□□ 2.23
TSSC4-206ENST00000440813 MST1RQ04912 1400 aa28.94■■■□□ 2.22
TSSC4-206ENST00000440813 TRPM1Q7Z4N2 1603 aa28.91■■■□□ 2.22
TSSC4-206ENST00000440813 ROCK2O75116 1388 aaKnown RBP28.88■■■□□ 2.21
TSSC4-206ENST00000440813 CDC42BPGQ6DT37 1551 aa28.88■■■□□ 2.21
TSSC4-206ENST00000440813 ARHGEF28Q8N1W1 1705 aaKnown RBP28.88■■■□□ 2.21
TSSC4-206ENST00000440813 NUTM2FA1L443 756 aa28.87■■■□□ 2.21
TSSC4-206ENST00000440813 BRINP3Q76B58 766 aa28.87■■■□□ 2.21
TSSC4-206ENST00000440813 MINK1Q8N4C8 1332 aaPredicted RBP28.87■■■□□ 2.21
TSSC4-206ENST00000440813 C1orf167Q5SNV9 1468 aa28.86■■■□□ 2.21
TSSC4-206ENST00000440813 HIRIP3Q9BW71 556 aaPredicted RBP28.85■■■□□ 2.21
TSSC4-206ENST00000440813 ORAI2Q96SN7 254 aa28.82■■■□□ 2.2
TSSC4-206ENST00000440813 TIMELESSQ9UNS1 1208 aa28.81■■■□□ 2.2
TSSC4-206ENST00000440813 FMN2Q9NZ56 1722 aa28.79■■■□□ 2.2
TSSC4-206ENST00000440813 PHLPP1O60346 1717 aa28.78■■■□□ 2.2
TSSC4-206ENST00000440813 ESCO1Q5FWF5 840 aa28.78■■■□□ 2.2
TSSC4-206ENST00000440813 RALGAPBQ86X10 1494 aa28.78■■■□□ 2.2
TSSC4-206ENST00000440813 CARD11Q9BXL7 1154 aa28.77■■■□□ 2.2
TSSC4-206ENST00000440813 GPRASP1Q5JY77 1395 aa28.76■■■□□ 2.2
TSSC4-206ENST00000440813 ADGRB2O60241 1585 aa28.76■■■□□ 2.19
TSSC4-206ENST00000440813 CENPJQ9HC77 1338 aaPredicted RBP28.76■■■□□ 2.19
TSSC4-206ENST00000440813 DDX17Q92841 729 aaKnown RBP28.76■■■□□ 2.19
TSSC4-206ENST00000440813 WASLO00401 505 aaPredicted RBP28.74■■■□□ 2.19
TSSC4-206ENST00000440813 AHDC1Q5TGY3 1603 aaPredicted RBP28.73■■■□□ 2.19
TSSC4-206ENST00000440813 RGPD8O14715 1765 aaPredicted RBP28.7■■■□□ 2.18
TSSC4-206ENST00000440813 COL16A1Q07092 1604 aaPredicted RBP28.69■■■□□ 2.18
TSSC4-206ENST00000440813 NHSL1Q5SYE7 1610 aa28.69■■■□□ 2.18
TSSC4-206ENST00000440813 EIF3AQ14152 1382 aaKnown RBP28.69■■■□□ 2.18
TSSC4-206ENST00000440813 QRICH2Q9H0J4 1663 aa28.68■■■□□ 2.18
TSSC4-206ENST00000440813 CDK19Q9BWU1 502 aa28.68■■■□□ 2.18
TSSC4-206ENST00000440813 ANKARQ7Z5J8 1434 aa28.67■■■□□ 2.18
TSSC4-206ENST00000440813 FOXO3O43524 673 aa28.66■■■□□ 2.18
TSSC4-206ENST00000440813 PRR36Q9H6K5 1346 aa28.66■■■□□ 2.18
TSSC4-206ENST00000440813 USP32Q8NFA0 1604 aa28.65■■■□□ 2.18
TSSC4-206ENST00000440813 TULP4Q9NRJ4 1543 aa28.65■■■□□ 2.18
TSSC4-206ENST00000440813 PHF8Q9UPP1 1060 aa28.64■■■□□ 2.18
TSSC4-206ENST00000440813 NPHP3Q7Z494 1330 aa28.63■■■□□ 2.17
TSSC4-206ENST00000440813 XPCQ01831 940 aaPredicted RBP28.62■■■□□ 2.17
TSSC4-206ENST00000440813 PMFBP1Q8TBY8 1022 aa28.62■■■□□ 2.17
TSSC4-206ENST00000440813 JCADQ9P266 1359 aa28.62■■■□□ 2.17
TSSC4-206ENST00000440813 NUDT16Q96DE0 195 aaKnown RBP28.61■■■□□ 2.17
TSSC4-206ENST00000440813 SRPK2P78362 688 aaKnown RBP28.6■■■□□ 2.17
TSSC4-206ENST00000440813 LRRC59Q96AG4 307 aaKnown RBP28.6■■■□□ 2.17
TSSC4-206ENST00000440813 SOS2Q07890 1332 aaPredicted RBP28.6■■■□□ 2.17
TSSC4-206ENST00000440813 KIF1AQ12756 1690 aa28.6■■■□□ 2.17
TSSC4-206ENST00000440813 CABP2Q9NPB3 220 aa28.58■■■□□ 2.17
TSSC4-206ENST00000440813 EVC2Q86UK5 1308 aa28.57■■■□□ 2.16
TSSC4-206ENST00000440813 ATP7BP35670 1465 aa28.57■■■□□ 2.16
TSSC4-206ENST00000440813 KRT28Q7Z3Y7 464 aa28.55■■■□□ 2.16
TSSC4-206ENST00000440813 PXDNQ92626 1479 aa28.54■■■□□ 2.16
TSSC4-206ENST00000440813 ST20-MTHFSA0A0A6YYL1 179 aa28.53■■■□□ 2.16
TSSC4-206ENST00000440813 PSME1Q06323 249 aa28.53■■■□□ 2.16
TSSC4-206ENST00000440813 CCDC61Q9Y6R9 512 aa28.53■■■□□ 2.16
TSSC4-206ENST00000440813 NGDNQ8NEJ9 315 aaKnown RBP28.52■■■□□ 2.16
TSSC4-206ENST00000440813 MED1Q15648 1581 aaPredicted RBP28.52■■■□□ 2.16
TSSC4-206ENST00000440813 ITSN1Q15811 1721 aa28.52■■■□□ 2.16
TSSC4-206ENST00000440813 SHPRHQ149N8 1683 aa28.51■■■□□ 2.15
TSSC4-206ENST00000440813 USP47Q96K76 1375 aa28.5■■■□□ 2.15
TSSC4-206ENST00000440813 SBNO2Q9Y2G9 1366 aa28.5■■■□□ 2.15
TSSC4-206ENST00000440813 PNPLA6Q8IY17 1366 aa28.5■■■□□ 2.15
TSSC4-206ENST00000440813 SPATA31A6Q5VVP1 1343 aa28.48■■■□□ 2.15
TSSC4-206ENST00000440813 NUTM2BA6NNL0 878 aaPredicted RBP28.47■■■□□ 2.15
TSSC4-206ENST00000440813 NUTM2EB1AL46 878 aaPredicted RBP28.47■■■□□ 2.15
TSSC4-206ENST00000440813 NUTM2AQ8IVF1 878 aaPredicted RBP28.47■■■□□ 2.15
TSSC4-206ENST00000440813 TOPAZ1Q8N9V7 1692 aa28.47■■■□□ 2.15
TSSC4-206ENST00000440813 DISP3Q9P2K9 1392 aa28.47■■■□□ 2.15
TSSC4-206ENST00000440813 PPIP5K1Q6PFW1 1433 aa28.45■■■□□ 2.15
TSSC4-206ENST00000440813 PLEKHG3A1L390 1219 aa28.45■■■□□ 2.14
TSSC4-206ENST00000440813 TESK2Q96S53 571 aa28.45■■■□□ 2.14
TSSC4-206ENST00000440813 SPATA31A3Q5VYP0 1347 aa28.44■■■□□ 2.14
TSSC4-206ENST00000440813 ACEP12821 1306 aa28.43■■■□□ 2.14
TSSC4-206ENST00000440813 CABP1Q9NZU7 370 aa28.43■■■□□ 2.14
TSSC4-206ENST00000440813 LMOD2Q6P5Q4 547 aa28.42■■■□□ 2.14
TSSC4-206ENST00000440813 LRP6O75581 1613 aa28.41■■■□□ 2.14
TSSC4-206ENST00000440813 SBNO1A3KN83 1393 aa28.4■■■□□ 2.14
TSSC4-206ENST00000440813 PHF23Q9BUL5 403 aaPredicted RBP28.4■■■□□ 2.14
TSSC4-206ENST00000440813 TNS3Q68CZ2 1445 aa28.4■■■□□ 2.14
TSSC4-206ENST00000440813 POLR3AO14802 1390 aaPredicted RBP28.39■■■□□ 2.14
TSSC4-206ENST00000440813 PAK3O75914 559 aaPredicted RBP28.39■■■□□ 2.14
TSSC4-206ENST00000440813 MEX3CQ5U5Q3 659 aaKnown RBP28.39■■■□□ 2.14
TSSC4-206ENST00000440813 ATAD2Q6PL18 1390 aa28.38■■■□□ 2.13
TSSC4-206ENST00000440813 SLC24A1O60721 1099 aa28.37■■■□□ 2.13
TSSC4-206ENST00000440813 PLEKHG5O94827 1062 aa28.37■■■□□ 2.13
TSSC4-206ENST00000440813 TRPM3Q9HCF6 1732 aaPredicted RBP28.36■■■□□ 2.13
TSSC4-206ENST00000440813 COL22A1Q8NFW1 1626 aaPredicted RBP28.36■■■□□ 2.13
TSSC4-206ENST00000440813 ADAMTS2O95450 1211 aa28.33■■■□□ 2.13
TSSC4-206ENST00000440813 EIF4G2P78344 907 aaKnown RBP eCLIP28.33■■■□□ 2.13
TSSC4-206ENST00000440813 TMF1P82094 1093 aa28.33■■■□□ 2.13
TSSC4-206ENST00000440813 ARHGEF10O15013 1369 aa28.33■■■□□ 2.13
TSSC4-206ENST00000440813 TMC1Q8TDI8 760 aa28.32■■■□□ 2.12
TSSC4-206ENST00000440813 HSPA5P11021 654 aaKnown RBP28.31■■■□□ 2.12
TSSC4-206ENST00000440813 CABLES1Q8TDN4 633 aa28.3■■■□□ 2.12
TSSC4-206ENST00000440813 PUS7Q96PZ0 661 aaKnown RBP28.3■■■□□ 2.12
TSSC4-206ENST00000440813 ALS2Q96Q42 1657 aa28.29■■■□□ 2.12
TSSC4-206ENST00000440813 SLC12A5Q9H2X9 1139 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms