RNA–Protein interactions for RNA: ENST00000440731.4

PGBD4P3-201, Transcript of piggyBac transposable element derived 4 pseudogene 3, humanhuman

BASIC

Gene PGBD4P3, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4P3-201ENST00000440731 C6orf229H3BNL8 230 aa8.1□□□□□ -1.11
PGBD4P3-201ENST00000440731 RIC3Q7Z5B4 369 aa8.1□□□□□ -1.11
PGBD4P3-201ENST00000440731 Q3C1V9 767 aa8.09□□□□□ -1.11
PGBD4P3-201ENST00000440731 MYSM1Q5VVJ2 828 aa8.09□□□□□ -1.11
PGBD4P3-201ENST00000440731 ZNF775Q96BV0 537 aaPredicted RBP8.09□□□□□ -1.11
PGBD4P3-201ENST00000440731 RSPH6AQ9H0K4 717 aa8.09□□□□□ -1.11
PGBD4P3-201ENST00000440731 PCDHGC3Q9UN70 934 aa8.09□□□□□ -1.11
PGBD4P3-201ENST00000440731 PLEKHG3A1L390 1219 aa8.08□□□□□ -1.12
PGBD4P3-201ENST00000440731 NRG2O14511 850 aaPredicted RBP8.08□□□□□ -1.12
PGBD4P3-201ENST00000440731 ADH1BP00325 375 aa8.08□□□□□ -1.12
PGBD4P3-201ENST00000440731 PPP1R18Q6NYC8 613 aa8.08□□□□□ -1.12
PGBD4P3-201ENST00000440731 PCDHB15Q9Y5E8 787 aa8.08□□□□□ -1.12
PGBD4P3-201ENST00000440731 NUTM2BA6NNL0 878 aaPredicted RBP8.07□□□□□ -1.12
PGBD4P3-201ENST00000440731 NUTM2EB1AL46 878 aaPredicted RBP8.07□□□□□ -1.12
PGBD4P3-201ENST00000440731 S1PR4O95977 384 aa8.07□□□□□ -1.12
PGBD4P3-201ENST00000440731 NUTM2DQ5VT03 806 aaPredicted RBP8.07□□□□□ -1.12
PGBD4P3-201ENST00000440731 RSBN1LQ6PCB5 846 aaPredicted RBP8.07□□□□□ -1.12
PGBD4P3-201ENST00000440731 BRICD5Q6PL45 260 aa8.07□□□□□ -1.12
PGBD4P3-201ENST00000440731 NUTM2AQ8IVF1 878 aaPredicted RBP8.07□□□□□ -1.12
PGBD4P3-201ENST00000440731 SLC6A16Q9GZN6 736 aa8.07□□□□□ -1.12
PGBD4P3-201ENST00000440731 PPEF1O14829 653 aaPredicted RBP8.06□□□□□ -1.12
PGBD4P3-201ENST00000440731 THAP11Q96EK4 314 aa8.06□□□□□ -1.12
PGBD4P3-201ENST00000440731 USB1Q9BQ65 265 aaKnown RBP8.06□□□□□ -1.12
PGBD4P3-201ENST00000440731 LIMD1Q9UGP4 676 aa8.06□□□□□ -1.12
PGBD4P3-201ENST00000440731 GGCXP38435 758 aa8.05□□□□□ -1.12
PGBD4P3-201ENST00000440731 CLK2P49760 499 aaKnown RBP8.05□□□□□ -1.12
PGBD4P3-201ENST00000440731 FAM160A2Q8N612 972 aaPredicted RBP8.05□□□□□ -1.12
PGBD4P3-201ENST00000440731 TSC1Q92574 1164 aa8.05□□□□□ -1.12
PGBD4P3-201ENST00000440731 PRDM9Q9NQV7 894 aa8.05□□□□□ -1.12
PGBD4P3-201ENST00000440731 SPTLC1O15269 473 aa8.04□□□□□ -1.12
PGBD4P3-201ENST00000440731 MTMR2Q13614 643 aa8.04□□□□□ -1.12
PGBD4P3-201ENST00000440731 PROCA1Q8NCQ7 364 aaPredicted RBP8.04□□□□□ -1.12
PGBD4P3-201ENST00000440731 CABLES1Q8TDN4 633 aa8.04□□□□□ -1.12
PGBD4P3-201ENST00000440731 PRKD2Q9BZL6 878 aa8.04□□□□□ -1.12
PGBD4P3-201ENST00000440731 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.04□□□□□ -1.12
PGBD4P3-201ENST00000440731 SALL2Q9Y467 1007 aaPredicted RBP8.04□□□□□ -1.12
PGBD4P3-201ENST00000440731 SKIV2LQ15477 1246 aaKnown RBP8.03□□□□□ -1.12
PGBD4P3-201ENST00000440731 RNF223E7ERA6 249 aa8.02□□□□□ -1.13
PGBD4P3-201ENST00000440731 HRCP23327 699 aa8.02□□□□□ -1.13
PGBD4P3-201ENST00000440731 QPCTQ16769 361 aa8.02□□□□□ -1.13
PGBD4P3-201ENST00000440731 ZBTB3Q9H5J0 574 aa8.02□□□□□ -1.13
PGBD4P3-201ENST00000440731 SH3D19Q5HYK7 790 aa8.01□□□□□ -1.13
PGBD4P3-201ENST00000440731 RETREG3Q86VR2 466 aa8.01□□□□□ -1.13
PGBD4P3-201ENST00000440731 PRR7Q8TB68 274 aa8.01□□□□□ -1.13
PGBD4P3-201ENST00000440731 GJA5P36382 358 aa8□□□□□ -1.13
PGBD4P3-201ENST00000440731 CCDC24Q8N4L8 307 aa8□□□□□ -1.13
PGBD4P3-201ENST00000440731 PCMTD1Q96MG8 357 aaPredicted RBP8□□□□□ -1.13
PGBD4P3-201ENST00000440731 RTL5Q5HYW3 569 aaPredicted RBP7.99□□□□□ -1.13
PGBD4P3-201ENST00000440731 SPDYE5A6NIY4 337 aa7.98□□□□□ -1.13
PGBD4P3-201ENST00000440731 MSS51Q4VC12 460 aa7.98□□□□□ -1.13
PGBD4P3-201ENST00000440731 FCF1Q9Y324 198 aaKnown RBP7.98□□□□□ -1.13
PGBD4P3-201ENST00000440731 CFAP99D6REC4 459 aa7.97□□□□□ -1.13
PGBD4P3-201ENST00000440731 LILRB3O75022 631 aa7.97□□□□□ -1.13
PGBD4P3-201ENST00000440731 PRPF38BQ5VTL8 546 aaKnown RBP7.97□□□□□ -1.13
PGBD4P3-201ENST00000440731 JUNDP17535 347 aa7.96□□□□□ -1.14
PGBD4P3-201ENST00000440731 ANKLE1Q8NAG6 615 aa7.96□□□□□ -1.14
PGBD4P3-201ENST00000440731 FBXO31Q5XUX0 539 aaPredicted RBP7.95□□□□□ -1.14
PGBD4P3-201ENST00000440731 PDZRN3Q9UPQ7 1066 aa7.95□□□□□ -1.14
PGBD4P3-201ENST00000440731 ZBTB24O43167 697 aaPredicted RBP7.94□□□□□ -1.14
PGBD4P3-201ENST00000440731 DXOO77932 396 aaKnown RBP7.94□□□□□ -1.14
PGBD4P3-201ENST00000440731 MMP16P51512 607 aa7.94□□□□□ -1.14
PGBD4P3-201ENST00000440731 TUSC1Q2TAM9 212 aa7.94□□□□□ -1.14
PGBD4P3-201ENST00000440731 PLA2G2CQ5R387 149 aa7.94□□□□□ -1.14
PGBD4P3-201ENST00000440731 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.94□□□□□ -1.14
PGBD4P3-201ENST00000440731 V9GY48 417 aaPredicted RBP7.94□□□□□ -1.14
PGBD4P3-201ENST00000440731 SLC19A1P41440 591 aa7.93□□□□□ -1.14
PGBD4P3-201ENST00000440731 NUDT12Q9BQG2 462 aa7.93□□□□□ -1.14
PGBD4P3-201ENST00000440731 GOPCQ9HD26 462 aa7.93□□□□□ -1.14
PGBD4P3-201ENST00000440731 AP1G2O75843 785 aa7.92□□□□□ -1.14
PGBD4P3-201ENST00000440731 CTHP32929 405 aa7.92□□□□□ -1.14
PGBD4P3-201ENST00000440731 CTDSPL2Q05D32 466 aa7.92□□□□□ -1.14
PGBD4P3-201ENST00000440731 HELBQ8NG08 1087 aaPredicted RBP7.92□□□□□ -1.14
PGBD4P3-201ENST00000440731 PER1O15534 1290 aaPredicted RBP7.91□□□□□ -1.14
PGBD4P3-201ENST00000440731 LIAT1Q6ZQX7 453 aa7.91□□□□□ -1.14
PGBD4P3-201ENST00000440731 CCNYL3P0C7X3 344 aa7.9□□□□□ -1.14
PGBD4P3-201ENST00000440731 RFC5P40937 340 aa7.9□□□□□ -1.14
PGBD4P3-201ENST00000440731 PTPRNQ16849 979 aa7.89□□□□□ -1.15
PGBD4P3-201ENST00000440731 DESI1Q6ICB0 168 aa7.89□□□□□ -1.15
PGBD4P3-201ENST00000440731 PTCRAQ6ISU1 281 aaPredicted RBP7.89□□□□□ -1.15
PGBD4P3-201ENST00000440731 EMID1Q96A84 441 aaPredicted RBP7.89□□□□□ -1.15
PGBD4P3-201ENST00000440731 PPP2R2DQ66LE6 453 aa7.88□□□□□ -1.15
PGBD4P3-201ENST00000440731 LYPD8Q6UX82 237 aa7.88□□□□□ -1.15
PGBD4P3-201ENST00000440731 CD2BP2O95400 341 aaKnown RBP7.87□□□□□ -1.15
PGBD4P3-201ENST00000440731 LRRN4Q8WUT4 740 aa7.87□□□□□ -1.15
PGBD4P3-201ENST00000440731 EVA1BQ9NVM1 165 aa7.87□□□□□ -1.15
PGBD4P3-201ENST00000440731 MAP10Q9P2G4 905 aa7.87□□□□□ -1.15
PGBD4P3-201ENST00000440731 KCNH2Q12809 1159 aa7.86□□□□□ -1.15
PGBD4P3-201ENST00000440731 FOXC1Q12948 553 aa7.86□□□□□ -1.15
PGBD4P3-201ENST00000440731 SPRYD7Q5W111 196 aa7.86□□□□□ -1.15
PGBD4P3-201ENST00000440731 ZNF697Q5TEC3 545 aa7.85□□□□□ -1.15
PGBD4P3-201ENST00000440731 UNC93B1Q9H1C4 597 aa7.85□□□□□ -1.15
PGBD4P3-201ENST00000440731 RPIAP49247 311 aa7.84□□□□□ -1.15
PGBD4P3-201ENST00000440731 TRIM32Q13049 653 aa7.84□□□□□ -1.15
PGBD4P3-201ENST00000440731 TMEM132AQ24JP5 1023 aa7.84□□□□□ -1.15
PGBD4P3-201ENST00000440731 LINC01559Q495D7 138 aa7.84□□□□□ -1.15
PGBD4P3-201ENST00000440731 POTECB2RU33 542 aa7.83□□□□□ -1.16
PGBD4P3-201ENST00000440731 USP17L8P0C7I0 530 aa7.83□□□□□ -1.16
PGBD4P3-201ENST00000440731 TMEM259Q4ZIN3 620 aa7.83□□□□□ -1.16
PGBD4P3-201ENST00000440731 ZNF598Q86UK7 904 aaKnown RBP7.83□□□□□ -1.16
PGBD4P3-201ENST00000440731 BAP1Q92560 729 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms