RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 FAM135BQ49AJ0 1406 aa20.56■□□□□ 0.88
TNFRSF1A-204ENST00000440083 SAFB2Q14151 953 aaKnown RBP eCLIP20.56■□□□□ 0.88
TNFRSF1A-204ENST00000440083 PRAM1Q96QH2 718 aa20.56■□□□□ 0.88
TNFRSF1A-204ENST00000440083 C19orf44Q9H6X5 657 aa20.56■□□□□ 0.88
TNFRSF1A-204ENST00000440083 ATF3P18847 181 aa20.53■□□□□ 0.88
TNFRSF1A-204ENST00000440083 DCCP43146 1447 aa20.53■□□□□ 0.88
TNFRSF1A-204ENST00000440083 ROCK2O75116 1388 aaKnown RBP20.52■□□□□ 0.88
TNFRSF1A-204ENST00000440083 RALGAPBQ86X10 1494 aa20.51■□□□□ 0.87
TNFRSF1A-204ENST00000440083 SIRT1Q96EB6 747 aa20.51■□□□□ 0.87
TNFRSF1A-204ENST00000440083 POGKQ9P215 609 aa20.51■□□□□ 0.87
TNFRSF1A-204ENST00000440083 MST1RQ04912 1400 aa20.51■□□□□ 0.87
TNFRSF1A-204ENST00000440083 ROBO1Q9Y6N7 1651 aa20.51■□□□□ 0.87
TNFRSF1A-204ENST00000440083 CDC42BPGQ6DT37 1551 aa20.51■□□□□ 0.87
TNFRSF1A-204ENST00000440083 CADPS2Q86UW7 1296 aa20.5■□□□□ 0.87
TNFRSF1A-204ENST00000440083 SLAIN2Q9P270 581 aa20.5■□□□□ 0.87
TNFRSF1A-204ENST00000440083 MINK1Q8N4C8 1332 aaPredicted RBP20.48■□□□□ 0.87
TNFRSF1A-204ENST00000440083 GPRASP1Q5JY77 1395 aa20.47■□□□□ 0.87
TNFRSF1A-204ENST00000440083 HIRIP3Q9BW71 556 aaPredicted RBP20.46■□□□□ 0.87
TNFRSF1A-204ENST00000440083 FMN2Q9NZ56 1722 aa20.45■□□□□ 0.86
TNFRSF1A-204ENST00000440083 NUTM2FA1L443 756 aa20.45■□□□□ 0.86
TNFRSF1A-204ENST00000440083 ADGRB2O60241 1585 aa20.45■□□□□ 0.86
TNFRSF1A-204ENST00000440083 C1orf167Q5SNV9 1468 aa20.44■□□□□ 0.86
TNFRSF1A-204ENST00000440083 HSPA1LP34931 641 aa20.44■□□□□ 0.86
TNFRSF1A-204ENST00000440083 QRICH2Q9H0J4 1663 aa20.43■□□□□ 0.86
TNFRSF1A-204ENST00000440083 BRINP3Q76B58 766 aa20.42■□□□□ 0.86
TNFRSF1A-204ENST00000440083 CARD11Q9BXL7 1154 aa20.42■□□□□ 0.86
TNFRSF1A-204ENST00000440083 CENPJQ9HC77 1338 aaPredicted RBP20.41■□□□□ 0.86
TNFRSF1A-204ENST00000440083 ORAI2Q96SN7 254 aa20.39■□□□□ 0.85
TNFRSF1A-204ENST00000440083 USP32Q8NFA0 1604 aa20.38■□□□□ 0.85
TNFRSF1A-204ENST00000440083 DDX17Q92841 729 aaKnown RBP20.38■□□□□ 0.85
TNFRSF1A-204ENST00000440083 RGPD8O14715 1765 aaPredicted RBP20.37■□□□□ 0.85
TNFRSF1A-204ENST00000440083 PHLPP1O60346 1717 aa20.36■□□□□ 0.85
TNFRSF1A-204ENST00000440083 EIF3AQ14152 1382 aaKnown RBP20.35■□□□□ 0.85
TNFRSF1A-204ENST00000440083 AHDC1Q5TGY3 1603 aaPredicted RBP20.35■□□□□ 0.85
TNFRSF1A-204ENST00000440083 PRR36Q9H6K5 1346 aa20.35■□□□□ 0.85
TNFRSF1A-204ENST00000440083 WASLO00401 505 aaPredicted RBP20.35■□□□□ 0.85
TNFRSF1A-204ENST00000440083 NHSL1Q5SYE7 1610 aa20.35■□□□□ 0.85
TNFRSF1A-204ENST00000440083 TULP4Q9NRJ4 1543 aa20.34■□□□□ 0.85
TNFRSF1A-204ENST00000440083 ESCO1Q5FWF5 840 aa20.34■□□□□ 0.85
TNFRSF1A-204ENST00000440083 COL16A1Q07092 1604 aaPredicted RBP20.33■□□□□ 0.84
TNFRSF1A-204ENST00000440083 EIF4G2P78344 907 aaKnown RBP eCLIP20.32■□□□□ 0.84
TNFRSF1A-204ENST00000440083 CDK19Q9BWU1 502 aa20.32■□□□□ 0.84
TNFRSF1A-204ENST00000440083 ANKARQ7Z5J8 1434 aa20.32■□□□□ 0.84
TNFRSF1A-204ENST00000440083 ATP7BP35670 1465 aa20.31■□□□□ 0.84
TNFRSF1A-204ENST00000440083 USP47Q96K76 1375 aa20.31■□□□□ 0.84
TNFRSF1A-204ENST00000440083 CABP2Q9NPB3 220 aa20.29■□□□□ 0.84
TNFRSF1A-204ENST00000440083 KIF1AQ12756 1690 aa20.29■□□□□ 0.84
TNFRSF1A-204ENST00000440083 HSPA5P11021 654 aaKnown RBP20.28■□□□□ 0.84
TNFRSF1A-204ENST00000440083 XPCQ01831 940 aaPredicted RBP20.28■□□□□ 0.84
TNFRSF1A-204ENST00000440083 TOPAZ1Q8N9V7 1692 aa20.27■□□□□ 0.84
TNFRSF1A-204ENST00000440083 ST20-MTHFSA0A0A6YYL1 179 aa20.27■□□□□ 0.84
TNFRSF1A-204ENST00000440083 PHF8Q9UPP1 1060 aa20.27■□□□□ 0.84
TNFRSF1A-204ENST00000440083 FOXO3O43524 673 aa20.26■□□□□ 0.83
TNFRSF1A-204ENST00000440083 SRPK2P78362 688 aaKnown RBP20.26■□□□□ 0.83
TNFRSF1A-204ENST00000440083 PMFBP1Q8TBY8 1022 aa20.26■□□□□ 0.83
TNFRSF1A-204ENST00000440083 NUDT16Q96DE0 195 aaKnown RBP20.26■□□□□ 0.83
TNFRSF1A-204ENST00000440083 ITSN1Q15811 1721 aa20.24■□□□□ 0.83
TNFRSF1A-204ENST00000440083 PXDNQ92626 1479 aa20.24■□□□□ 0.83
TNFRSF1A-204ENST00000440083 SBNO2Q9Y2G9 1366 aa20.24■□□□□ 0.83
TNFRSF1A-204ENST00000440083 MIER1Q8N108 512 aa20.24■□□□□ 0.83
TNFRSF1A-204ENST00000440083 EVC2Q86UK5 1308 aa20.24■□□□□ 0.83
TNFRSF1A-204ENST00000440083 TESK2Q96S53 571 aa20.23■□□□□ 0.83
TNFRSF1A-204ENST00000440083 SOS2Q07890 1332 aaPredicted RBP20.22■□□□□ 0.83
TNFRSF1A-204ENST00000440083 NPHP3Q7Z494 1330 aa20.22■□□□□ 0.83
TNFRSF1A-204ENST00000440083 JCADQ9P266 1359 aa20.2■□□□□ 0.82
TNFRSF1A-204ENST00000440083 PPIP5K1Q6PFW1 1433 aa20.19■□□□□ 0.82
TNFRSF1A-204ENST00000440083 DDX10Q13206 875 aaKnown RBP20.19■□□□□ 0.82
TNFRSF1A-204ENST00000440083 CCDC61Q9Y6R9 512 aa20.18■□□□□ 0.82
TNFRSF1A-204ENST00000440083 SHPRHQ149N8 1683 aa20.18■□□□□ 0.82
TNFRSF1A-204ENST00000440083 DISP3Q9P2K9 1392 aa20.18■□□□□ 0.82
TNFRSF1A-204ENST00000440083 KRT28Q7Z3Y7 464 aa20.17■□□□□ 0.82
TNFRSF1A-204ENST00000440083 NGDNQ8NEJ9 315 aaKnown RBP20.17■□□□□ 0.82
TNFRSF1A-204ENST00000440083 PNPLA6Q8IY17 1366 aa20.17■□□□□ 0.82
TNFRSF1A-204ENST00000440083 PSME1Q06323 249 aa20.15■□□□□ 0.82
TNFRSF1A-204ENST00000440083 LRRC59Q96AG4 307 aaKnown RBP20.15■□□□□ 0.82
TNFRSF1A-204ENST00000440083 CABP1Q9NZU7 370 aa20.15■□□□□ 0.82
TNFRSF1A-204ENST00000440083 MED1Q15648 1581 aaPredicted RBP20.15■□□□□ 0.82
TNFRSF1A-204ENST00000440083 TRPM3Q9HCF6 1732 aaPredicted RBP20.15■□□□□ 0.82
TNFRSF1A-204ENST00000440083 ACEP12821 1306 aa20.14■□□□□ 0.81
TNFRSF1A-204ENST00000440083 PLEKHG3A1L390 1219 aa20.14■□□□□ 0.81
TNFRSF1A-204ENST00000440083 LRP6O75581 1613 aa20.13■□□□□ 0.81
TNFRSF1A-204ENST00000440083 POLR3AO14802 1390 aaPredicted RBP20.13■□□□□ 0.81
TNFRSF1A-204ENST00000440083 ATAD2Q6PL18 1390 aa20.13■□□□□ 0.81
TNFRSF1A-204ENST00000440083 TNS3Q68CZ2 1445 aa20.12■□□□□ 0.81
TNFRSF1A-204ENST00000440083 CCDC7Q96M83 1385 aa20.11■□□□□ 0.81
TNFRSF1A-204ENST00000440083 SPATA31A3Q5VYP0 1347 aa20.11■□□□□ 0.81
TNFRSF1A-204ENST00000440083 SBNO1A3KN83 1393 aa20.1■□□□□ 0.81
TNFRSF1A-204ENST00000440083 NUTM2BA6NNL0 878 aaPredicted RBP20.1■□□□□ 0.81
TNFRSF1A-204ENST00000440083 NUTM2EB1AL46 878 aaPredicted RBP20.1■□□□□ 0.81
TNFRSF1A-204ENST00000440083 PLEKHG5O94827 1062 aa20.1■□□□□ 0.81
TNFRSF1A-204ENST00000440083 NUTM2AQ8IVF1 878 aaPredicted RBP20.1■□□□□ 0.81
TNFRSF1A-204ENST00000440083 COL22A1Q8NFW1 1626 aaPredicted RBP20.09■□□□□ 0.81
TNFRSF1A-204ENST00000440083 WASHC2AQ641Q2 1341 aa20.09■□□□□ 0.81
TNFRSF1A-204ENST00000440083 TMF1P82094 1093 aa20.09■□□□□ 0.81
TNFRSF1A-204ENST00000440083 ALS2Q96Q42 1657 aa20.09■□□□□ 0.81
TNFRSF1A-204ENST00000440083 LMOD2Q6P5Q4 547 aa20.08■□□□□ 0.81
TNFRSF1A-204ENST00000440083 TMC1Q8TDI8 760 aa20.08■□□□□ 0.81
TNFRSF1A-204ENST00000440083 AKAP12Q02952 1782 aa20.08■□□□□ 0.8
TNFRSF1A-204ENST00000440083 SPATA31A6Q5VVP1 1343 aa20.07■□□□□ 0.8
TNFRSF1A-204ENST00000440083 CD163L1Q9NR16 1453 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms