RNA–Protein interactions for RNA: ENST00000439976.5

LAMB1-205, Transcript of laminin subunit beta 1, human

TSL 5

Gene LAMB1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMB1-205	ENST00000439976	SLC4A1AP	Q9BWU0	796 aa	Known RBP	24.56	■■□□□ 1.52
LAMB1-205	ENST00000439976	MYOM2	P54296	1465 aa		24.56	■■□□□ 1.52
LAMB1-205	ENST00000439976	USP21	Q9UK80	565 aa		24.55	■■□□□ 1.52
LAMB1-205	ENST00000439976	ATRN	O75882	1429 aa		24.54	■■□□□ 1.52
LAMB1-205	ENST00000439976	PXDN	Q92626	1479 aa		24.54	■■□□□ 1.52
LAMB1-205	ENST00000439976	TRPC5	Q9UL62	973 aa	Predicted RBP	24.52	■■□□□ 1.52
LAMB1-205	ENST00000439976	EP400	Q96L91	3159 aa		24.51	■■□□□ 1.51
LAMB1-205	ENST00000439976	ADGRF5	Q8IZF2	1346 aa		24.51	■■□□□ 1.51
LAMB1-205	ENST00000439976	FOXD1	Q16676	465 aa		24.5	■■□□□ 1.51
LAMB1-205	ENST00000439976	ATAD2	Q6PL18	1390 aa		24.5	■■□□□ 1.51
LAMB1-205	ENST00000439976	TECPR2	O15040	1411 aa		24.5	■■□□□ 1.51
LAMB1-205	ENST00000439976	ESCO1	Q5FWF5	840 aa		24.49	■■□□□ 1.51
LAMB1-205	ENST00000439976	NPHP3	Q7Z494	1330 aa		24.49	■■□□□ 1.51
LAMB1-205	ENST00000439976	BCL9L	Q86UU0	1499 aa		24.49	■■□□□ 1.51
LAMB1-205	ENST00000439976	SPATA31E1	Q6ZUB1	1445 aa		24.48	■■□□□ 1.51
LAMB1-205	ENST00000439976	MARF1	Q9Y4F3	1742 aa	Known RBP	24.47	■■□□□ 1.51
LAMB1-205	ENST00000439976	IFT172	Q9UG01	1749 aa		24.47	■■□□□ 1.51
LAMB1-205	ENST00000439976	FOXO3	O43524	673 aa		24.46	■■□□□ 1.51
LAMB1-205	ENST00000439976	WAPL	Q7Z5K2	1190 aa		24.46	■■□□□ 1.51
LAMB1-205	ENST00000439976	XPC	Q01831	940 aa	Predicted RBP	24.45	■■□□□ 1.5
LAMB1-205	ENST00000439976	LRPPRC	P42704	1394 aa	Known RBP	24.44	■■□□□ 1.5
LAMB1-205	ENST00000439976	PLEKHH1	Q9ULM0	1364 aa		24.44	■■□□□ 1.5
LAMB1-205	ENST00000439976	KNDC1	Q76NI1	1749 aa		24.43	■■□□□ 1.5
LAMB1-205	ENST00000439976	CCDC144A	A2RUR9	1427 aa		24.43	■■□□□ 1.5
LAMB1-205	ENST00000439976	ABCC11	Q96J66	1382 aa		24.42	■■□□□ 1.5
LAMB1-205	ENST00000439976	STK26	Q9P289	416 aa		24.42	■■□□□ 1.5
LAMB1-205	ENST00000439976	NUTM2F	A1L443	756 aa		24.41	■■□□□ 1.5
LAMB1-205	ENST00000439976	RGL3	Q3MIN7	710 aa		24.4	■■□□□ 1.5
LAMB1-205	ENST00000439976	PIK3C2G	O75747	1445 aa		24.4	■■□□□ 1.5
LAMB1-205	ENST00000439976	FMN2	Q9NZ56	1722 aa		24.4	■■□□□ 1.5
LAMB1-205	ENST00000439976	ANKRD30B	Q9BXX2	1392 aa		24.4	■■□□□ 1.5
LAMB1-205	ENST00000439976	TMEM132E	Q6IEE7	984 aa		24.39	■■□□□ 1.49
LAMB1-205	ENST00000439976	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	24.38	■■□□□ 1.49
LAMB1-205	ENST00000439976	GJD4	Q96KN9	370 aa	Predicted RBP	24.37	■■□□□ 1.49
LAMB1-205	ENST00000439976	SLIT2	O94813	1529 aa		24.36	■■□□□ 1.49
LAMB1-205	ENST00000439976	SPATA31A3	Q5VYP0	1347 aa		24.35	■■□□□ 1.49
LAMB1-205	ENST00000439976	YTHDC2	Q9H6S0	1430 aa	Known RBP	24.35	■■□□□ 1.49
LAMB1-205	ENST00000439976	MPHOSPH9	Q99550	1183 aa		24.35	■■□□□ 1.49
LAMB1-205	ENST00000439976	KIF1A	Q12756	1690 aa		24.34	■■□□□ 1.49
LAMB1-205	ENST00000439976	GLI3	P10071	1580 aa		24.34	■■□□□ 1.49
LAMB1-205	ENST00000439976	RALGAPB	Q86X10	1494 aa		24.32	■■□□□ 1.48
LAMB1-205	ENST00000439976	UNC5CL	Q8IV45	518 aa		24.32	■■□□□ 1.48
LAMB1-205	ENST00000439976	USP32	Q8NFA0	1604 aa		24.32	■■□□□ 1.48
LAMB1-205	ENST00000439976	RGPD8	O14715	1765 aa	Predicted RBP	24.31	■■□□□ 1.48
LAMB1-205	ENST00000439976	CCDC125	Q86Z20	511 aa		24.3	■■□□□ 1.48
LAMB1-205	ENST00000439976	SIRT1	Q96EB6	747 aa		24.3	■■□□□ 1.48
LAMB1-205	ENST00000439976	NRXN1	Q9ULB1	1477 aa		24.3	■■□□□ 1.48
LAMB1-205	ENST00000439976	KRT28	Q7Z3Y7	464 aa		24.28	■■□□□ 1.48
LAMB1-205	ENST00000439976	C14orf93	Q9H972	538 aa	Known RBP	24.28	■■□□□ 1.48
LAMB1-205	ENST00000439976	ZRANB1	Q9UGI0	708 aa		24.28	■■□□□ 1.48
LAMB1-205	ENST00000439976	BRWD3	Q6RI45	1802 aa		24.26	■■□□□ 1.47
LAMB1-205	ENST00000439976	TNS3	Q68CZ2	1445 aa		24.26	■■□□□ 1.47
LAMB1-205	ENST00000439976	PHF8	Q9UPP1	1060 aa		24.24	■■□□□ 1.47
LAMB1-205	ENST00000439976	CFAP70	Q5T0N1	1121 aa		24.23	■■□□□ 1.47
LAMB1-205	ENST00000439976	CABLES1	Q8TDN4	633 aa		24.23	■■□□□ 1.47
LAMB1-205	ENST00000439976	ABCA3	Q99758	1704 aa		24.23	■■□□□ 1.47
LAMB1-205	ENST00000439976	BLM	P54132	1417 aa	Predicted RBP	24.22	■■□□□ 1.47
LAMB1-205	ENST00000439976	PLCH1	Q4KWH8	1693 aa		24.21	■■□□□ 1.47
LAMB1-205	ENST00000439976	SBNO1	A3KN83	1393 aa		24.2	■■□□□ 1.46
LAMB1-205	ENST00000439976	VPS72	Q15906	364 aa		24.2	■■□□□ 1.46
LAMB1-205	ENST00000439976	NWD2	Q9ULI1	1742 aa		24.2	■■□□□ 1.46
LAMB1-205	ENST00000439976	DHX57	Q6P158	1386 aa	Known RBP	24.19	■■□□□ 1.46
LAMB1-205	ENST00000439976	ONECUT3	O60422	494 aa	Predicted RBP	24.18	■■□□□ 1.46
LAMB1-205	ENST00000439976	SEPT12	Q8IYM1	358 aa		24.18	■■□□□ 1.46
LAMB1-205	ENST00000439976	PRAM1	Q96QH2	718 aa		24.18	■■□□□ 1.46
LAMB1-205	ENST00000439976	DLC1	Q96QB1	1528 aa		24.17	■■□□□ 1.46
LAMB1-205	ENST00000439976	PSME1	Q06323	249 aa		24.17	■■□□□ 1.46
LAMB1-205	ENST00000439976	SAFB2	Q14151	953 aa	Known RBP eCLIP	24.16	■■□□□ 1.46
LAMB1-205	ENST00000439976	DEFB132	Q7Z7B7	95 aa		24.16	■■□□□ 1.46
LAMB1-205	ENST00000439976	ANKAR	Q7Z5J8	1434 aa		24.15	■■□□□ 1.46
LAMB1-205	ENST00000439976	ADGRB1	O14514	1584 aa		24.15	■■□□□ 1.46
LAMB1-205	ENST00000439976	ADGRB2	O60241	1585 aa		24.15	■■□□□ 1.46
LAMB1-205	ENST00000439976	ARHGEF10	O15013	1369 aa		24.15	■■□□□ 1.46
LAMB1-205	ENST00000439976	TRPM3	Q9HCF6	1732 aa	Predicted RBP	24.13	■■□□□ 1.45
LAMB1-205	ENST00000439976	FAM83G	A6ND36	823 aa		24.13	■■□□□ 1.45
LAMB1-205	ENST00000439976	PLEKHG5	O94827	1062 aa		24.13	■■□□□ 1.45
LAMB1-205	ENST00000439976	HAP1	P54257	671 aa	Predicted RBP	24.13	■■□□□ 1.45
LAMB1-205	ENST00000439976	PMFBP1	Q8TBY8	1022 aa		24.12	■■□□□ 1.45
LAMB1-205	ENST00000439976	NRAP	Q86VF7	1730 aa		24.12	■■□□□ 1.45
LAMB1-205	ENST00000439976	LMOD2	Q6P5Q4	547 aa		24.1	■■□□□ 1.45
LAMB1-205	ENST00000439976	ALS2	Q96Q42	1657 aa		24.09	■■□□□ 1.45
LAMB1-205	ENST00000439976	KRT27	Q7Z3Y8	459 aa		24.08	■■□□□ 1.45
LAMB1-205	ENST00000439976	PRR36	Q9H6K5	1346 aa		24.08	■■□□□ 1.44
LAMB1-205	ENST00000439976	POGK	Q9P215	609 aa		24.07	■■□□□ 1.44
LAMB1-205	ENST00000439976	CCDC9	Q9Y3X0	531 aa	Known RBP	24.07	■■□□□ 1.44
LAMB1-205	ENST00000439976	ACIN1	Q9UKV3	1341 aa	Known RBP	24.07	■■□□□ 1.44
LAMB1-205	ENST00000439976	HIRIP3	Q9BW71	556 aa	Predicted RBP	24.05	■■□□□ 1.44
LAMB1-205	ENST00000439976	CRYBG1	Q9Y4K1	1723 aa		24.04	■■□□□ 1.44
LAMB1-205	ENST00000439976	SF3B2	Q13435	895 aa	Known RBP	24.03	■■□□□ 1.44
LAMB1-205	ENST00000439976	TRAK1	Q9UPV9	953 aa		24.03	■■□□□ 1.44
LAMB1-205	ENST00000439976	TULP4	Q9NRJ4	1543 aa		24.03	■■□□□ 1.44
LAMB1-205	ENST00000439976	COL14A1	Q05707	1796 aa	Known RBP	24.03	■■□□□ 1.44
LAMB1-205	ENST00000439976	BTG4	Q9NY30	223 aa		24.02	■■□□□ 1.44
LAMB1-205	ENST00000439976	RAB3GAP2	Q9H2M9	1393 aa		24.02	■■□□□ 1.44
LAMB1-205	ENST00000439976	FAM98C	Q17RN3	349 aa	Known RBP	24.01	■■□□□ 1.43
LAMB1-205	ENST00000439976	LRP5	O75197	1615 aa		24.01	■■□□□ 1.43
LAMB1-205	ENST00000439976	MINK1	Q8N4C8	1332 aa	Predicted RBP	24.01	■■□□□ 1.43
LAMB1-205	ENST00000439976	GPRASP1	Q5JY77	1395 aa		24	■■□□□ 1.43
LAMB1-205	ENST00000439976	WASL	O00401	505 aa	Predicted RBP	23.98	■■□□□ 1.43
LAMB1-205	ENST00000439976	EIF3A	Q14152	1382 aa	Known RBP	23.98	■■□□□ 1.43

Retrieved 100 of 20,778 RNA–protein pairs in 57 ms