RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 STK26Q9P289 416 aa23.68■■□□□ 1.38
ITGB1-207ENST00000439974 KNDC1Q76NI1 1749 aa23.67■■□□□ 1.38
ITGB1-207ENST00000439974 SOS2Q07890 1332 aaPredicted RBP23.67■■□□□ 1.38
ITGB1-207ENST00000439974 ABCC11Q96J66 1382 aa23.66■■□□□ 1.38
ITGB1-207ENST00000439974 TMEM132EQ6IEE7 984 aa23.65■■□□□ 1.38
ITGB1-207ENST00000439974 AFF2P51816 1311 aa23.64■■□□□ 1.38
ITGB1-207ENST00000439974 WAPLQ7Z5K2 1190 aa23.64■■□□□ 1.37
ITGB1-207ENST00000439974 YTHDC2Q9H6S0 1430 aaKnown RBP23.63■■□□□ 1.37
ITGB1-207ENST00000439974 MYOM2P54296 1465 aa23.62■■□□□ 1.37
ITGB1-207ENST00000439974 RXRBP28702 533 aa23.62■■□□□ 1.37
ITGB1-207ENST00000439974 ESCO1Q5FWF5 840 aa23.62■■□□□ 1.37
ITGB1-207ENST00000439974 NRXN1Q9ULB1 1477 aa23.62■■□□□ 1.37
ITGB1-207ENST00000439974 C8orf37Q96NL8 207 aa23.61■■□□□ 1.37
ITGB1-207ENST00000439974 C14orf93Q9H972 538 aaKnown RBP23.61■■□□□ 1.37
ITGB1-207ENST00000439974 NPHP3Q7Z494 1330 aa23.6■■□□□ 1.37
ITGB1-207ENST00000439974 PLEKHH1Q9ULM0 1364 aa23.6■■□□□ 1.37
ITGB1-207ENST00000439974 CDK12Q9NYV4 1490 aaPredicted RBP23.58■■□□□ 1.37
ITGB1-207ENST00000439974 ADAMTS2O95450 1211 aa23.57■■□□□ 1.36
ITGB1-207ENST00000439974 TRIM26Q12899 539 aaPredicted RBP23.57■■□□□ 1.36
ITGB1-207ENST00000439974 SIRT1Q96EB6 747 aa23.57■■□□□ 1.36
ITGB1-207ENST00000439974 DHX57Q6P158 1386 aaKnown RBP23.56■■□□□ 1.36
ITGB1-207ENST00000439974 COL22A1Q8NFW1 1626 aaPredicted RBP23.56■■□□□ 1.36
ITGB1-207ENST00000439974 CFAP70Q5T0N1 1121 aa23.56■■□□□ 1.36
ITGB1-207ENST00000439974 FMN2Q9NZ56 1722 aa23.56■■□□□ 1.36
ITGB1-207ENST00000439974 PXDNQ92626 1479 aa23.56■■□□□ 1.36
ITGB1-207ENST00000439974 NUTM2FA1L443 756 aa23.55■■□□□ 1.36
ITGB1-207ENST00000439974 FOXO3O43524 673 aa23.54■■□□□ 1.36
ITGB1-207ENST00000439974 NGLY1Q96IV0 654 aa23.54■■□□□ 1.36
ITGB1-207ENST00000439974 HRCP23327 699 aa23.53■■□□□ 1.36
ITGB1-207ENST00000439974 QTRT2Q9H974 415 aaKnown RBP23.52■■□□□ 1.36
ITGB1-207ENST00000439974 RBM6P78332 1123 aaKnown RBP23.51■■□□□ 1.35
ITGB1-207ENST00000439974 KIF1AQ12756 1690 aa23.51■■□□□ 1.35
ITGB1-207ENST00000439974 XPCQ01831 940 aaPredicted RBP23.5■■□□□ 1.35
ITGB1-207ENST00000439974 UPF1Q92900 1129 aaKnown RBP eCLIP23.48■■□□□ 1.35
ITGB1-207ENST00000439974 RGS12O14924 1447 aa23.48■■□□□ 1.35
ITGB1-207ENST00000439974 DLC1Q96QB1 1528 aa23.48■■□□□ 1.35
ITGB1-207ENST00000439974 PRAM1Q96QH2 718 aa23.47■■□□□ 1.35
ITGB1-207ENST00000439974 USP21Q9UK80 565 aa23.47■■□□□ 1.35
ITGB1-207ENST00000439974 FNBP4Q8N3X1 1017 aaPredicted RBP23.46■■□□□ 1.35
ITGB1-207ENST00000439974 ADGRB1O14514 1584 aa23.45■■□□□ 1.34
ITGB1-207ENST00000439974 SAFB2Q14151 953 aaKnown RBP eCLIP23.44■■□□□ 1.34
ITGB1-207ENST00000439974 TRPC5Q9UL62 973 aaPredicted RBP23.44■■□□□ 1.34
ITGB1-207ENST00000439974 RGPD8O14715 1765 aaPredicted RBP23.44■■□□□ 1.34
ITGB1-207ENST00000439974 MARF1Q9Y4F3 1742 aaKnown RBP23.43■■□□□ 1.34
ITGB1-207ENST00000439974 DCAF11Q8TEB1 546 aa23.43■■□□□ 1.34
ITGB1-207ENST00000439974 POGKQ9P215 609 aa23.43■■□□□ 1.34
ITGB1-207ENST00000439974 SPATA31A3Q5VYP0 1347 aa23.42■■□□□ 1.34
ITGB1-207ENST00000439974 STAC3Q96MF2 364 aa23.42■■□□□ 1.34
ITGB1-207ENST00000439974 PHF8Q9UPP1 1060 aa23.42■■□□□ 1.34
ITGB1-207ENST00000439974 KDM2AQ9Y2K7 1162 aa23.42■■□□□ 1.34
ITGB1-207ENST00000439974 KRT28Q7Z3Y7 464 aa23.41■■□□□ 1.34
ITGB1-207ENST00000439974 ADGRB2O60241 1585 aa23.4■■□□□ 1.34
ITGB1-207ENST00000439974 ATRNO75882 1429 aa23.4■■□□□ 1.34
ITGB1-207ENST00000439974 TRAK1Q9UPV9 953 aa23.39■■□□□ 1.33
ITGB1-207ENST00000439974 ANKARQ7Z5J8 1434 aa23.39■■□□□ 1.33
ITGB1-207ENST00000439974 PSME1Q06323 249 aa23.37■■□□□ 1.33
ITGB1-207ENST00000439974 TNS3Q68CZ2 1445 aa23.36■■□□□ 1.33
ITGB1-207ENST00000439974 BCL9LQ86UU0 1499 aa23.36■■□□□ 1.33
ITGB1-207ENST00000439974 USP32Q8NFA0 1604 aa23.35■■□□□ 1.33
ITGB1-207ENST00000439974 PCGF6Q9BYE7 350 aa23.34■■□□□ 1.33
ITGB1-207ENST00000439974 SBNO1A3KN83 1393 aa23.34■■□□□ 1.33
ITGB1-207ENST00000439974 EIF3AQ14152 1382 aaKnown RBP23.34■■□□□ 1.33
ITGB1-207ENST00000439974 MINK1Q8N4C8 1332 aaPredicted RBP23.33■■□□□ 1.32
ITGB1-207ENST00000439974 HIRIP3Q9BW71 556 aaPredicted RBP23.32■■□□□ 1.32
ITGB1-207ENST00000439974 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.32■■□□□ 1.32
ITGB1-207ENST00000439974 PMFBP1Q8TBY8 1022 aa23.31■■□□□ 1.32
ITGB1-207ENST00000439974 ARHGEF10O15013 1369 aa23.3■■□□□ 1.32
ITGB1-207ENST00000439974 ATAD2Q6PL18 1390 aa23.3■■□□□ 1.32
ITGB1-207ENST00000439974 SLIT2O94813 1529 aa23.3■■□□□ 1.32
ITGB1-207ENST00000439974 TULP4Q9NRJ4 1543 aa23.3■■□□□ 1.32
ITGB1-207ENST00000439974 HAP1P54257 671 aaPredicted RBP23.3■■□□□ 1.32
ITGB1-207ENST00000439974 GJD4Q96KN9 370 aaPredicted RBP23.29■■□□□ 1.32
ITGB1-207ENST00000439974 WASLO00401 505 aaPredicted RBP23.28■■□□□ 1.32
ITGB1-207ENST00000439974 UNC5CLQ8IV45 518 aa23.28■■□□□ 1.32
ITGB1-207ENST00000439974 ARHGEF28Q8N1W1 1705 aaKnown RBP23.28■■□□□ 1.32
ITGB1-207ENST00000439974 LMOD2Q6P5Q4 547 aa23.27■■□□□ 1.32
ITGB1-207ENST00000439974 PRR36Q9H6K5 1346 aa23.27■■□□□ 1.32
ITGB1-207ENST00000439974 ABCA3Q99758 1704 aa23.26■■□□□ 1.31
ITGB1-207ENST00000439974 CABLES1Q8TDN4 633 aa23.26■■□□□ 1.31
ITGB1-207ENST00000439974 SIN3AQ96ST3 1273 aa23.26■■□□□ 1.31
ITGB1-207ENST00000439974 GPRASP1Q5JY77 1395 aa23.25■■□□□ 1.31
ITGB1-207ENST00000439974 TRPM3Q9HCF6 1732 aaPredicted RBP23.25■■□□□ 1.31
ITGB1-207ENST00000439974 PLEKHG5O94827 1062 aa23.24■■□□□ 1.31
ITGB1-207ENST00000439974 KIAA1210Q9ULL0 1709 aa23.23■■□□□ 1.31
ITGB1-207ENST00000439974 RALGAPBQ86X10 1494 aa23.23■■□□□ 1.31
ITGB1-207ENST00000439974 GLI3P10071 1580 aa23.23■■□□□ 1.31
ITGB1-207ENST00000439974 NWD2Q9ULI1 1742 aa23.22■■□□□ 1.31
ITGB1-207ENST00000439974 NEUROD1Q13562 356 aa23.21■■□□□ 1.31
ITGB1-207ENST00000439974 PLCH1Q4KWH8 1693 aa23.21■■□□□ 1.31
ITGB1-207ENST00000439974 ALS2Q96Q42 1657 aa23.21■■□□□ 1.31
ITGB1-207ENST00000439974 ITSN1Q15811 1721 aa23.19■■□□□ 1.3
ITGB1-207ENST00000439974 NGDNQ8NEJ9 315 aaKnown RBP23.19■■□□□ 1.3
ITGB1-207ENST00000439974 ATP7BP35670 1465 aa23.18■■□□□ 1.3
ITGB1-207ENST00000439974 VPS72Q15906 364 aa23.18■■□□□ 1.3
ITGB1-207ENST00000439974 EP400Q96L91 3159 aa23.18■■□□□ 1.3
ITGB1-207ENST00000439974 NUDT16Q96DE0 195 aaKnown RBP23.17■■□□□ 1.3
ITGB1-207ENST00000439974 FAM83GA6ND36 823 aa23.15■■□□□ 1.3
ITGB1-207ENST00000439974 PAK3O75914 559 aaPredicted RBP23.14■■□□□ 1.29
ITGB1-207ENST00000439974 CDK19Q9BWU1 502 aa23.14■■□□□ 1.29
ITGB1-207ENST00000439974 CCDC125Q86Z20 511 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms