RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 PREX1Q8TCU6 1659 aa11.14□□□□□ -0.63
COPS3-203ENST00000439936 UHRF1BP1Q6BDS2 1440 aa11.13□□□□□ -0.63
COPS3-203ENST00000439936 SETD5Q9C0A6 1442 aa11.13□□□□□ -0.63
COPS3-203ENST00000439936 LMTK3Q96Q04 1460 aa11.13□□□□□ -0.63
COPS3-203ENST00000439936 DPY19L2Q6NUT2 758 aa11.13□□□□□ -0.63
COPS3-203ENST00000439936 TET3O43151 1660 aa11.11□□□□□ -0.63
COPS3-203ENST00000439936 IQGAP3Q86VI3 1631 aa11.11□□□□□ -0.63
COPS3-203ENST00000439936 ERVK-7P63135 1459 aa11.11□□□□□ -0.63
COPS3-203ENST00000439936 IDI1Q13907 227 aa11.11□□□□□ -0.63
COPS3-203ENST00000439936 SPATA31D1Q6ZQQ2 1576 aa11.1□□□□□ -0.63
COPS3-203ENST00000439936 HRCP23327 699 aa11.1□□□□□ -0.63
COPS3-203ENST00000439936 TRIM26Q12899 539 aaPredicted RBP11.1□□□□□ -0.63
COPS3-203ENST00000439936 EFCAB6Q5THR3 1501 aa11.09□□□□□ -0.63
COPS3-203ENST00000439936 NOS1P29475 1434 aa11.09□□□□□ -0.63
COPS3-203ENST00000439936 G3V3G9 751 aa11.09□□□□□ -0.63
COPS3-203ENST00000439936 THEMISQ8N1K5 641 aaPredicted RBP11.09□□□□□ -0.63
COPS3-203ENST00000439936 MPHOSPH9Q99550 1183 aa11.09□□□□□ -0.63
COPS3-203ENST00000439936 E9PCH4 1651 aa11.09□□□□□ -0.63
COPS3-203ENST00000439936 A2ML1A8K2U0 1454 aa11.09□□□□□ -0.63
COPS3-203ENST00000439936 RAB3GAP2Q9H2M9 1393 aa11.08□□□□□ -0.64
COPS3-203ENST00000439936 ACIN1Q9UKV3 1341 aaKnown RBP11.08□□□□□ -0.64
COPS3-203ENST00000439936 RIOK3O14730 519 aaKnown RBP11.08□□□□□ -0.64
COPS3-203ENST00000439936 SLC52A1Q9NWF4 448 aa11.08□□□□□ -0.64
COPS3-203ENST00000439936 RPRD2Q5VT52 1461 aaKnown RBP11.08□□□□□ -0.64
COPS3-203ENST00000439936 MYO3AQ8NEV4 1616 aa11.07□□□□□ -0.64
COPS3-203ENST00000439936 EFCAB3Q8N7B9 438 aa11.07□□□□□ -0.64
COPS3-203ENST00000439936 HS3ST6Q96QI5 342 aa11.07□□□□□ -0.64
COPS3-203ENST00000439936 NLRP1Q9C000 1473 aa11.07□□□□□ -0.64
COPS3-203ENST00000439936 CEP170BQ9Y4F5 1589 aaPredicted RBP11.06□□□□□ -0.64
COPS3-203ENST00000439936 NCKAP5LQ9HCH0 1330 aa11.06□□□□□ -0.64
COPS3-203ENST00000439936 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.06□□□□□ -0.64
COPS3-203ENST00000439936 ZFP91Q96JP5 570 aaPredicted RBP11.06□□□□□ -0.64
COPS3-203ENST00000439936 SYNMO15061 1565 aa11.06□□□□□ -0.64
COPS3-203ENST00000439936 ZNF142P52746 1687 aaPredicted RBP11.05□□□□□ -0.64
COPS3-203ENST00000439936 STRCQ7RTU9 1775 aa11.05□□□□□ -0.64
COPS3-203ENST00000439936 UGGT1Q9NYU2 1555 aa11.04□□□□□ -0.64
COPS3-203ENST00000439936 FAM205CA6NFA0 338 aa11.03□□□□□ -0.64
COPS3-203ENST00000439936 CHGAP10645 457 aaKnown RBP11.03□□□□□ -0.64
COPS3-203ENST00000439936 ANKLE2Q86XL3 938 aa11.03□□□□□ -0.64
COPS3-203ENST00000439936 PIK3C2BO00750 1634 aa11.03□□□□□ -0.64
COPS3-203ENST00000439936 PTPRTO14522 1441 aa11.03□□□□□ -0.64
COPS3-203ENST00000439936 UBR1Q8IWV7 1749 aa11.02□□□□□ -0.65
COPS3-203ENST00000439936 BOLA1Q9Y3E2 137 aa11.02□□□□□ -0.65
COPS3-203ENST00000439936 PLA2R1Q13018 1463 aa11.01□□□□□ -0.65
COPS3-203ENST00000439936 SPHKAPQ2M3C7 1700 aa11.01□□□□□ -0.65
COPS3-203ENST00000439936 VGFO15240 615 aaPredicted RBP11.01□□□□□ -0.65
COPS3-203ENST00000439936 LTKP29376 864 aa11.01□□□□□ -0.65
COPS3-203ENST00000439936 TXNDC2Q86VQ3 553 aa11.01□□□□□ -0.65
COPS3-203ENST00000439936 KRTAP3-3Q9BYR6 98 aa11.01□□□□□ -0.65
COPS3-203ENST00000439936 KRTAP3-2Q9BYR7 98 aa11.01□□□□□ -0.65
COPS3-203ENST00000439936 MYO5BQ9ULV0 1848 aa11.01□□□□□ -0.65
COPS3-203ENST00000439936 EID1Q9Y6B2 187 aa10.99□□□□□ -0.65
COPS3-203ENST00000439936 TMEM2Q9UHN6 1383 aa10.98□□□□□ -0.65
COPS3-203ENST00000439936 TMEM131LA2VDJ0 1609 aa10.98□□□□□ -0.65
COPS3-203ENST00000439936 KDM5AP29375 1690 aaKnown RBP10.98□□□□□ -0.65
COPS3-203ENST00000439936 ARHGAP23Q9P227 1491 aa10.97□□□□□ -0.65
COPS3-203ENST00000439936 HDGFP51858 240 aaKnown RBP10.97□□□□□ -0.65
COPS3-203ENST00000439936 DOK7Q18PE1 504 aa10.97□□□□□ -0.65
COPS3-203ENST00000439936 ZNF710Q8N1W2 664 aa10.97□□□□□ -0.65
COPS3-203ENST00000439936 MS4A4AQ96JQ5 239 aa10.97□□□□□ -0.65
COPS3-203ENST00000439936 SLIT1O75093 1534 aa10.96□□□□□ -0.65
COPS3-203ENST00000439936 POTEB3A0JP26 581 aa10.96□□□□□ -0.65
COPS3-203ENST00000439936 ZNF326Q5BKZ1 582 aaKnown RBP10.96□□□□□ -0.65
COPS3-203ENST00000439936 NUTM2DQ5VT03 806 aaPredicted RBP10.96□□□□□ -0.65
COPS3-203ENST00000439936 POTEBQ6S5H4 581 aa10.96□□□□□ -0.65
COPS3-203ENST00000439936 CLTCL1P53675 1640 aa10.96□□□□□ -0.66
COPS3-203ENST00000439936 KIF1BO60333 1816 aa10.95□□□□□ -0.66
COPS3-203ENST00000439936 ADGRB3O60242 1522 aa10.95□□□□□ -0.66
COPS3-203ENST00000439936 TRPM2O94759 1503 aa10.95□□□□□ -0.66
COPS3-203ENST00000439936 HOXB1P14653 301 aaPredicted RBP10.95□□□□□ -0.66
COPS3-203ENST00000439936 PCGF6Q9BYE7 350 aa10.95□□□□□ -0.66
COPS3-203ENST00000439936 ANKRD30BQ9BXX2 1392 aa10.95□□□□□ -0.66
COPS3-203ENST00000439936 POLR1AO95602 1720 aaPredicted RBP10.95□□□□□ -0.66
COPS3-203ENST00000439936 NPHP4O75161 1426 aaPredicted RBP10.94□□□□□ -0.66
COPS3-203ENST00000439936 RIMS2Q9UQ26 1411 aa10.94□□□□□ -0.66
COPS3-203ENST00000439936 RIMBP2O15034 1052 aa10.94□□□□□ -0.66
COPS3-203ENST00000439936 HOXB3P14651 431 aaPredicted RBP10.94□□□□□ -0.66
COPS3-203ENST00000439936 RGL3Q3MIN7 710 aa10.94□□□□□ -0.66
COPS3-203ENST00000439936 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.94□□□□□ -0.66
COPS3-203ENST00000439936 PHF8Q9UPP1 1060 aa10.94□□□□□ -0.66
COPS3-203ENST00000439936 MED14O60244 1454 aa10.94□□□□□ -0.66
COPS3-203ENST00000439936 NEURL4Q96JN8 1562 aa10.94□□□□□ -0.66
COPS3-203ENST00000439936 SCAF11Q99590 1463 aaKnown RBP10.93□□□□□ -0.66
COPS3-203ENST00000439936 ZFYVE9O95405 1425 aa10.93□□□□□ -0.66
COPS3-203ENST00000439936 HS6ST3Q8IZP7 471 aa10.92□□□□□ -0.66
COPS3-203ENST00000439936 BCANQ96GW7 911 aa10.92□□□□□ -0.66
COPS3-203ENST00000439936 BCL11BQ9C0K0 894 aaPredicted RBP10.92□□□□□ -0.66
COPS3-203ENST00000439936 CCDC144AA2RUR9 1427 aa10.92□□□□□ -0.66
COPS3-203ENST00000439936 PPP1R15AO75807 674 aaPredicted RBP10.91□□□□□ -0.66
COPS3-203ENST00000439936 SLC26A8Q96RN1 970 aa10.91□□□□□ -0.66
COPS3-203ENST00000439936 TAOK2Q9UL54 1235 aa10.91□□□□□ -0.66
COPS3-203ENST00000439936 RPGRIP1LQ68CZ1 1315 aa10.9□□□□□ -0.66
COPS3-203ENST00000439936 ZNF335Q9H4Z2 1342 aaPredicted RBP10.9□□□□□ -0.66
COPS3-203ENST00000439936 IQGAP1P46940 1657 aa10.9□□□□□ -0.66
COPS3-203ENST00000439936 SOX12O15370 315 aa10.9□□□□□ -0.67
COPS3-203ENST00000439936 BBXQ8WY36 941 aaPredicted RBP10.9□□□□□ -0.67
COPS3-203ENST00000439936 TBX22Q9Y458 520 aa10.9□□□□□ -0.67
COPS3-203ENST00000439936 ERBB3P21860 1342 aa10.89□□□□□ -0.67
COPS3-203ENST00000439936 SLC24A1O60721 1099 aa10.89□□□□□ -0.67
COPS3-203ENST00000439936 STK24Q9Y6E0 443 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms