RNA–Protein interactions for RNA: ENST00000439790.5

LINC00460-202, long intergenic non-protein coding RNA 460, humanhuman

TSL 1 (best)

Gene LINC00460, Length 497 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00460-202ENST00000439790 PREX2Q70Z35 1606 aa9.3□□□□□ -0.92
LINC00460-202ENST00000439790 SYCP2Q9BX26 1530 aa9.3□□□□□ -0.92
LINC00460-202ENST00000439790 HNRNPMP52272 730 aaKnown RBP eCLIP9.29□□□□□ -0.92
LINC00460-202ENST00000439790 ATP1B4Q9UN42 357 aaPredicted RBP9.29□□□□□ -0.92
LINC00460-202ENST00000439790 ATP7AQ04656 1500 aa9.29□□□□□ -0.92
LINC00460-202ENST00000439790 NAIPQ13075 1403 aa9.29□□□□□ -0.92
LINC00460-202ENST00000439790 NLRP1Q9C000 1473 aa9.28□□□□□ -0.92
LINC00460-202ENST00000439790 KDM5DQ9BY66 1539 aa9.28□□□□□ -0.92
LINC00460-202ENST00000439790 NUTM2BA6NNL0 878 aaPredicted RBP9.28□□□□□ -0.92
LINC00460-202ENST00000439790 NUTM2EB1AL46 878 aaPredicted RBP9.28□□□□□ -0.92
LINC00460-202ENST00000439790 C7P10643 843 aa9.28□□□□□ -0.92
LINC00460-202ENST00000439790 LTKP29376 864 aa9.28□□□□□ -0.92
LINC00460-202ENST00000439790 FAM50AQ14320 339 aaKnown RBP9.28□□□□□ -0.92
LINC00460-202ENST00000439790 NUTM2DQ5VT03 806 aaPredicted RBP9.28□□□□□ -0.92
LINC00460-202ENST00000439790 ASTLQ6HA08 431 aaPredicted RBP9.28□□□□□ -0.92
LINC00460-202ENST00000439790 NUTM2AQ8IVF1 878 aaPredicted RBP9.28□□□□□ -0.92
LINC00460-202ENST00000439790 MYOM3Q5VTT5 1437 aa9.28□□□□□ -0.92
LINC00460-202ENST00000439790 INO80Q9ULG1 1556 aaPredicted RBP9.28□□□□□ -0.92
LINC00460-202ENST00000439790 AFF2P51816 1311 aa9.28□□□□□ -0.92
LINC00460-202ENST00000439790 SPATA31A6Q5VVP1 1343 aa9.28□□□□□ -0.92
LINC00460-202ENST00000439790 PHLPP1O60346 1717 aa9.28□□□□□ -0.92
LINC00460-202ENST00000439790 EIF5BO60841 1220 aaKnown RBP9.27□□□□□ -0.93
LINC00460-202ENST00000439790 B4GALNT3Q6L9W6 998 aa9.27□□□□□ -0.93
LINC00460-202ENST00000439790 MAMSTRQ6ZN01 415 aa9.27□□□□□ -0.93
LINC00460-202ENST00000439790 SLC39A7Q92504 469 aa9.27□□□□□ -0.93
LINC00460-202ENST00000439790 MRS2Q9HD23 443 aa9.27□□□□□ -0.93
LINC00460-202ENST00000439790 NEFMP07197 916 aa9.26□□□□□ -0.93
LINC00460-202ENST00000439790 PDE3BQ13370 1112 aa9.26□□□□□ -0.93
LINC00460-202ENST00000439790 ZNF777Q9ULD5 760 aaPredicted RBP9.26□□□□□ -0.93
LINC00460-202ENST00000439790 PLEKHH2Q8IVE3 1493 aa9.26□□□□□ -0.93
LINC00460-202ENST00000439790 CCDC61Q9Y6R9 512 aa9.25□□□□□ -0.93
LINC00460-202ENST00000439790 SCAF11Q99590 1463 aaKnown RBP9.25□□□□□ -0.93
LINC00460-202ENST00000439790 RPRD2Q5VT52 1461 aaKnown RBP9.24□□□□□ -0.93
LINC00460-202ENST00000439790 SLAIN2Q9P270 581 aa9.24□□□□□ -0.93
LINC00460-202ENST00000439790 METRNQ9UJH8 293 aa9.24□□□□□ -0.93
LINC00460-202ENST00000439790 ATMINO43313 823 aaPredicted RBP9.23□□□□□ -0.93
LINC00460-202ENST00000439790 HSPA5P11021 654 aaKnown RBP9.23□□□□□ -0.93
LINC00460-202ENST00000439790 L1TD1Q5T7N2 865 aaKnown RBP9.23□□□□□ -0.93
LINC00460-202ENST00000439790 DAXXQ9UER7 740 aaPredicted RBP9.23□□□□□ -0.93
LINC00460-202ENST00000439790 ATAD2Q6PL18 1390 aa9.23□□□□□ -0.93
LINC00460-202ENST00000439790 RRP9O43818 475 aaKnown RBP9.22□□□□□ -0.93
LINC00460-202ENST00000439790 PLEKHG5O94827 1062 aa9.22□□□□□ -0.93
LINC00460-202ENST00000439790 RBM6P78332 1123 aaKnown RBP9.22□□□□□ -0.93
LINC00460-202ENST00000439790 IRX6P78412 446 aaPredicted RBP9.22□□□□□ -0.93
LINC00460-202ENST00000439790 BACH2Q9BYV9 841 aa9.22□□□□□ -0.93
LINC00460-202ENST00000439790 QTRT2Q9H974 415 aaKnown RBP9.22□□□□□ -0.93
LINC00460-202ENST00000439790 MTUS2Q5JR59 1369 aa9.22□□□□□ -0.93
LINC00460-202ENST00000439790 CCDC144AA2RUR9 1427 aa9.22□□□□□ -0.93
LINC00460-202ENST00000439790 SPATA31E1Q6ZUB1 1445 aa9.22□□□□□ -0.93
LINC00460-202ENST00000439790 LRP5O75197 1615 aa9.21□□□□□ -0.93
LINC00460-202ENST00000439790 TXNDC2Q86VQ3 553 aa9.21□□□□□ -0.94
LINC00460-202ENST00000439790 IL27Q8NEV9 243 aa9.21□□□□□ -0.94
LINC00460-202ENST00000439790 PKNOX2Q96KN3 472 aa9.21□□□□□ -0.94
LINC00460-202ENST00000439790 BRD4O60885 1362 aaPredicted RBP9.21□□□□□ -0.94
LINC00460-202ENST00000439790 ROCK1Q13464 1354 aa9.21□□□□□ -0.94
LINC00460-202ENST00000439790 ARHGAP23Q9P227 1491 aa9.21□□□□□ -0.94
LINC00460-202ENST00000439790 DIP2AQ14689 1571 aa9.2□□□□□ -0.94
LINC00460-202ENST00000439790 LRRIQ1Q96JM4 1722 aa9.2□□□□□ -0.94
LINC00460-202ENST00000439790 KIF3BO15066 747 aa9.2□□□□□ -0.94
LINC00460-202ENST00000439790 PROSER2Q86WR7 435 aaPredicted RBP9.2□□□□□ -0.94
LINC00460-202ENST00000439790 RASEFQ8IZ41 740 aa9.2□□□□□ -0.94
LINC00460-202ENST00000439790 MS4A3Q96HJ5 214 aa9.2□□□□□ -0.94
LINC00460-202ENST00000439790 PRDM15P57071 1507 aaPredicted RBP9.2□□□□□ -0.94
LINC00460-202ENST00000439790 CDC42BPAQ5VT25 1732 aa9.19□□□□□ -0.94
LINC00460-202ENST00000439790 POTEJP0CG39 1038 aa9.19□□□□□ -0.94
LINC00460-202ENST00000439790 KCNA6P17658 529 aa9.19□□□□□ -0.94
LINC00460-202ENST00000439790 TSPYL2Q9H2G4 693 aaPredicted RBP9.19□□□□□ -0.94
LINC00460-202ENST00000439790 ISY1Q9ULR0 285 aaKnown RBP9.19□□□□□ -0.94
LINC00460-202ENST00000439790 GPATCH8Q9UKJ3 1502 aaKnown RBP9.19□□□□□ -0.94
LINC00460-202ENST00000439790 SHPRHQ149N8 1683 aa9.19□□□□□ -0.94
LINC00460-202ENST00000439790 SLIT1O75093 1534 aa9.18□□□□□ -0.94
LINC00460-202ENST00000439790 YY1P25490 414 aa9.18□□□□□ -0.94
LINC00460-202ENST00000439790 PDE4AP27815 886 aa9.18□□□□□ -0.94
LINC00460-202ENST00000439790 LRPPRCP42704 1394 aaKnown RBP9.18□□□□□ -0.94
LINC00460-202ENST00000439790 DHX29Q7Z478 1369 aaKnown RBP9.18□□□□□ -0.94
LINC00460-202ENST00000439790 C8orf37Q96NL8 207 aa9.18□□□□□ -0.94
LINC00460-202ENST00000439790 KIAA1107Q9UPP5 1409 aa9.18□□□□□ -0.94
LINC00460-202ENST00000439790 AHDC1Q5TGY3 1603 aaPredicted RBP9.17□□□□□ -0.94
LINC00460-202ENST00000439790 ERVK-7P63135 1459 aa9.17□□□□□ -0.94
LINC00460-202ENST00000439790 MSH6P52701 1360 aa9.17□□□□□ -0.94
LINC00460-202ENST00000439790 DEFB132Q7Z7B7 95 aa9.17□□□□□ -0.94
LINC00460-202ENST00000439790 FAM9BQ8IZU0 186 aa9.17□□□□□ -0.94
LINC00460-202ENST00000439790 PLCD3Q8N3E9 789 aa9.17□□□□□ -0.94
LINC00460-202ENST00000439790 KIF12Q96FN5 646 aa9.17□□□□□ -0.94
LINC00460-202ENST00000439790 SLC26A8Q96RN1 970 aa9.17□□□□□ -0.94
LINC00460-202ENST00000439790 UBR1Q8IWV7 1749 aa9.17□□□□□ -0.94
LINC00460-202ENST00000439790 MAST1Q9Y2H9 1570 aa9.16□□□□□ -0.94
LINC00460-202ENST00000439790 KIF15Q9NS87 1388 aa9.16□□□□□ -0.94
LINC00460-202ENST00000439790 ZNF644Q9H582 1327 aaPredicted RBP9.16□□□□□ -0.94
LINC00460-202ENST00000439790 RRP1P56182 461 aaKnown RBP9.16□□□□□ -0.94
LINC00460-202ENST00000439790 MBD5Q9P267 1494 aa9.15□□□□□ -0.94
LINC00460-202ENST00000439790 UTRNP46939 3433 aa9.15□□□□□ -0.94
LINC00460-202ENST00000439790 PSDA5PKW4 1024 aaPredicted RBP9.15□□□□□ -0.94
LINC00460-202ENST00000439790 NUBP1P53384 320 aa9.15□□□□□ -0.94
LINC00460-202ENST00000439790 RALBP1Q15311 655 aa9.15□□□□□ -0.94
LINC00460-202ENST00000439790 E9PCH4 1651 aa9.15□□□□□ -0.94
LINC00460-202ENST00000439790 ADGBQ8N7X0 1667 aa9.15□□□□□ -0.94
LINC00460-202ENST00000439790 VIRMAQ69YN4 1812 aaKnown RBP9.15□□□□□ -0.95
LINC00460-202ENST00000439790 KIF7Q2M1P5 1343 aa9.14□□□□□ -0.95
LINC00460-202ENST00000439790 SCUBE2Q9NQ36 999 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms