RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 MINK1Q8N4C8 1332 aaPredicted RBP13.92□□□□□ -0.18
CBX5-202ENST00000439541 AMOTL2Q9Y2J4 779 aa13.91□□□□□ -0.18
CBX5-202ENST00000439541 PTCH1Q13635 1447 aa13.9□□□□□ -0.18
CBX5-202ENST00000439541 KCNA6P17658 529 aa13.9□□□□□ -0.18
CBX5-202ENST00000439541 MYOM1P52179 1685 aa13.9□□□□□ -0.18
CBX5-202ENST00000439541 FAM135BQ49AJ0 1406 aa13.9□□□□□ -0.18
CBX5-202ENST00000439541 CHD2O14647 1828 aaKnown RBP13.89□□□□□ -0.19
CBX5-202ENST00000439541 PIK3R4Q99570 1358 aa13.89□□□□□ -0.19
CBX5-202ENST00000439541 NWD1Q149M9 1564 aa13.88□□□□□ -0.19
CBX5-202ENST00000439541 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.88□□□□□ -0.19
CBX5-202ENST00000439541 RBM33Q96EV2 1170 aaKnown RBP13.86□□□□□ -0.19
CBX5-202ENST00000439541 STRCP1A6NGW2 1772 aa13.86□□□□□ -0.19
CBX5-202ENST00000439541 GTF3C3Q9Y5Q9 886 aa13.85□□□□□ -0.19
CBX5-202ENST00000439541 CABP2Q9NPB3 220 aa13.85□□□□□ -0.19
CBX5-202ENST00000439541 ADGRB2O60241 1585 aa13.84□□□□□ -0.19
CBX5-202ENST00000439541 NALCNQ8IZF0 1738 aa13.84□□□□□ -0.19
CBX5-202ENST00000439541 EVC2Q86UK5 1308 aa13.84□□□□□ -0.19
CBX5-202ENST00000439541 SIRT1Q96EB6 747 aa13.83□□□□□ -0.2
CBX5-202ENST00000439541 SRPK2P78362 688 aaKnown RBP13.83□□□□□ -0.2
CBX5-202ENST00000439541 CDCA8Q53HL2 280 aa13.81□□□□□ -0.2
CBX5-202ENST00000439541 CDK19Q9BWU1 502 aa13.81□□□□□ -0.2
CBX5-202ENST00000439541 NKTRP30414 1462 aaKnown RBP13.81□□□□□ -0.2
CBX5-202ENST00000439541 ATP7BP35670 1465 aa13.79□□□□□ -0.2
CBX5-202ENST00000439541 WASLO00401 505 aaPredicted RBP13.79□□□□□ -0.2
CBX5-202ENST00000439541 ZNF335Q9H4Z2 1342 aaPredicted RBP13.79□□□□□ -0.2
CBX5-202ENST00000439541 SLC24A1O60721 1099 aa13.78□□□□□ -0.2
CBX5-202ENST00000439541 CNGB1Q14028 1251 aaPredicted RBP13.78□□□□□ -0.2
CBX5-202ENST00000439541 MIER1Q8N108 512 aa13.78□□□□□ -0.2
CBX5-202ENST00000439541 TMC1Q8TDI8 760 aa13.78□□□□□ -0.2
CBX5-202ENST00000439541 PANK3Q9H999 370 aa13.78□□□□□ -0.2
CBX5-202ENST00000439541 USP32Q8NFA0 1604 aa13.78□□□□□ -0.2
CBX5-202ENST00000439541 NUTM2FA1L443 756 aa13.78□□□□□ -0.2
CBX5-202ENST00000439541 SLC12A5Q9H2X9 1139 aa13.78□□□□□ -0.2
CBX5-202ENST00000439541 ADGRL3Q9HAR2 1447 aa13.78□□□□□ -0.2
CBX5-202ENST00000439541 PRR36Q9H6K5 1346 aa13.77□□□□□ -0.2
CBX5-202ENST00000439541 ATAD2Q6PL18 1390 aa13.77□□□□□ -0.2
CBX5-202ENST00000439541 CDC42BPGQ6DT37 1551 aa13.77□□□□□ -0.2
CBX5-202ENST00000439541 TOPAZ1Q8N9V7 1692 aa13.76□□□□□ -0.21
CBX5-202ENST00000439541 FMN2Q9NZ56 1722 aa13.76□□□□□ -0.21
CBX5-202ENST00000439541 TMEM94Q12767 1356 aa13.75□□□□□ -0.21
CBX5-202ENST00000439541 CD163L1Q9NR16 1453 aa13.75□□□□□ -0.21
CBX5-202ENST00000439541 PROSER2Q86WR7 435 aaPredicted RBP13.75□□□□□ -0.21
CBX5-202ENST00000439541 PPIP5K1Q6PFW1 1433 aa13.75□□□□□ -0.21
CBX5-202ENST00000439541 C14orf37Q86TY3 774 aa13.74□□□□□ -0.21
CBX5-202ENST00000439541 A0A1W2PP64 1363 aa13.74□□□□□ -0.21
CBX5-202ENST00000439541 NUDT16Q96DE0 195 aaKnown RBP13.74□□□□□ -0.21
CBX5-202ENST00000439541 PUS7Q96PZ0 661 aaKnown RBP13.74□□□□□ -0.21
CBX5-202ENST00000439541 XIRP1Q702N8 1843 aaKnown RBP13.73□□□□□ -0.21
CBX5-202ENST00000439541 PER1O15534 1290 aaPredicted RBP13.73□□□□□ -0.21
CBX5-202ENST00000439541 CARD14Q9BXL6 1004 aa13.73□□□□□ -0.21
CBX5-202ENST00000439541 CABP1Q9NZU7 370 aa13.73□□□□□ -0.21
CBX5-202ENST00000439541 NSD3Q9BZ95 1437 aa13.73□□□□□ -0.21
CBX5-202ENST00000439541 RGPD8O14715 1765 aaPredicted RBP13.73□□□□□ -0.21
CBX5-202ENST00000439541 ANKRD36BQ8N2N9 1353 aa13.72□□□□□ -0.21
CBX5-202ENST00000439541 LRRC7Q96NW7 1537 aa13.72□□□□□ -0.21
CBX5-202ENST00000439541 NINLQ9Y2I6 1382 aa13.71□□□□□ -0.21
CBX5-202ENST00000439541 ANP32CO43423 234 aa13.71□□□□□ -0.21
CBX5-202ENST00000439541 DMRT2Q9Y5R5 561 aa13.7□□□□□ -0.22
CBX5-202ENST00000439541 ITSN1Q15811 1721 aa13.7□□□□□ -0.22
CBX5-202ENST00000439541 CC2D1BQ5T0F9 858 aaKnown RBP13.69□□□□□ -0.22
CBX5-202ENST00000439541 YTHDC1Q96MU7 727 aaKnown RBP13.69□□□□□ -0.22
CBX5-202ENST00000439541 ANKARQ7Z5J8 1434 aa13.69□□□□□ -0.22
CBX5-202ENST00000439541 CCDC61Q9Y6R9 512 aa13.69□□□□□ -0.22
CBX5-202ENST00000439541 PRKRIP1Q9H875 184 aaPredicted RBP13.68□□□□□ -0.22
CBX5-202ENST00000439541 AKAP12Q02952 1782 aa13.67□□□□□ -0.22
CBX5-202ENST00000439541 MON2Q7Z3U7 1717 aa13.67□□□□□ -0.22
CBX5-202ENST00000439541 AMER1Q5JTC6 1135 aaPredicted RBP13.67□□□□□ -0.22
CBX5-202ENST00000439541 PMFBP1Q8TBY8 1022 aa13.67□□□□□ -0.22
CBX5-202ENST00000439541 KNSTRNQ9Y448 316 aa13.67□□□□□ -0.22
CBX5-202ENST00000439541 CPSF1Q10570 1443 aaKnown RBP13.67□□□□□ -0.22
CBX5-202ENST00000439541 NRKQ7Z2Y5 1582 aa13.66□□□□□ -0.22
CBX5-202ENST00000439541 KTN1Q86UP2 1357 aaKnown RBP13.66□□□□□ -0.22
CBX5-202ENST00000439541 TERF2IPQ9NYB0 399 aa13.66□□□□□ -0.22
CBX5-202ENST00000439541 LTBP4Q8N2S1 1624 aa13.65□□□□□ -0.22
CBX5-202ENST00000439541 MST1RQ04912 1400 aa13.65□□□□□ -0.22
CBX5-202ENST00000439541 HDGFL2Q7Z4V5 671 aaPredicted RBP13.65□□□□□ -0.22
CBX5-202ENST00000439541 C19orf44Q9H6X5 657 aa13.65□□□□□ -0.22
CBX5-202ENST00000439541 MSH6P52701 1360 aa13.65□□□□□ -0.22
CBX5-202ENST00000439541 ACEP12821 1306 aa13.65□□□□□ -0.22
CBX5-202ENST00000439541 DCCP43146 1447 aa13.65□□□□□ -0.22
CBX5-202ENST00000439541 NCOA3Q9Y6Q9 1424 aa13.65□□□□□ -0.22
CBX5-202ENST00000439541 PARD3Q8TEW0 1356 aa13.64□□□□□ -0.23
CBX5-202ENST00000439541 C1orf167Q5SNV9 1468 aa13.64□□□□□ -0.23
CBX5-202ENST00000439541 PLEKHG3A1L390 1219 aa13.63□□□□□ -0.23
CBX5-202ENST00000439541 KIF20BQ96Q89 1820 aa13.63□□□□□ -0.23
CBX5-202ENST00000439541 USP6P35125 1406 aa13.63□□□□□ -0.23
CBX5-202ENST00000439541 POLR3AO14802 1390 aaPredicted RBP13.62□□□□□ -0.23
CBX5-202ENST00000439541 ATF3P18847 181 aa13.62□□□□□ -0.23
CBX5-202ENST00000439541 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.62□□□□□ -0.23
CBX5-202ENST00000439541 ORAI2Q96SN7 254 aa13.62□□□□□ -0.23
CBX5-202ENST00000439541 EDC4Q6P2E9 1401 aaKnown RBP13.62□□□□□ -0.23
CBX5-202ENST00000439541 CCDC184Q52MB2 194 aa13.62□□□□□ -0.23
CBX5-202ENST00000439541 ESCO1Q5FWF5 840 aa13.62□□□□□ -0.23
CBX5-202ENST00000439541 CGNL1Q0VF96 1302 aa13.61□□□□□ -0.23
CBX5-202ENST00000439541 NPC1L1Q9UHC9 1359 aa13.61□□□□□ -0.23
CBX5-202ENST00000439541 NGDNQ8NEJ9 315 aaKnown RBP13.61□□□□□ -0.23
CBX5-202ENST00000439541 PHF8Q9UPP1 1060 aa13.61□□□□□ -0.23
CBX5-202ENST00000439541 GGNBP2Q9H3C7 697 aa13.6□□□□□ -0.23
CBX5-202ENST00000439541 NME9Q86XW9 330 aa13.6□□□□□ -0.23
CBX5-202ENST00000439541 ANKRD26Q9UPS8 1709 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms