RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 TRAK2O60296 914 aa18.26■□□□□ 0.51
TSC2-206ENST00000439117 REC8O95072 547 aa18.26■□□□□ 0.51
TSC2-206ENST00000439117 CALRP27797 417 aaKnown RBP18.26■□□□□ 0.51
TSC2-206ENST00000439117 THEMISQ8N1K5 641 aaPredicted RBP18.26■□□□□ 0.51
TSC2-206ENST00000439117 AAMPQ13685 434 aa18.25■□□□□ 0.51
TSC2-206ENST00000439117 CWC15Q9P013 229 aaKnown RBP18.24■□□□□ 0.51
TSC2-206ENST00000439117 ROCK1Q13464 1354 aa18.24■□□□□ 0.51
TSC2-206ENST00000439117 ARHGEF11O15085 1522 aa18.24■□□□□ 0.51
TSC2-206ENST00000439117 CCDC173Q0VFZ6 552 aa18.24■□□□□ 0.51
TSC2-206ENST00000439117 NBPF8Q3BBV2 869 aa18.23■□□□□ 0.51
TSC2-206ENST00000439117 ANKRD45Q5TZF3 282 aa18.23■□□□□ 0.51
TSC2-206ENST00000439117 TMX4Q9H1E5 349 aaPredicted RBP18.23■□□□□ 0.51
TSC2-206ENST00000439117 COG6Q9Y2V7 657 aa18.23■□□□□ 0.51
TSC2-206ENST00000439117 PRAM1Q96QH2 718 aa18.23■□□□□ 0.51
TSC2-206ENST00000439117 FRAT2O75474 233 aaPredicted RBP18.23■□□□□ 0.51
TSC2-206ENST00000439117 TTC5Q8N0Z6 440 aa18.23■□□□□ 0.51
TSC2-206ENST00000439117 ZNF608Q9ULD9 1512 aaPredicted RBP18.23■□□□□ 0.51
TSC2-206ENST00000439117 TPM1P09493 284 aa18.22■□□□□ 0.51
TSC2-206ENST00000439117 NLRP6P59044 892 aa18.22■□□□□ 0.51
TSC2-206ENST00000439117 PCF11O94913 1555 aaKnown RBP18.22■□□□□ 0.51
TSC2-206ENST00000439117 GTF2E1P29083 439 aaPredicted RBP18.22■□□□□ 0.51
TSC2-206ENST00000439117 HOMER1Q86YM7 354 aa18.22■□□□□ 0.51
TSC2-206ENST00000439117 C22orf23Q9BZE7 217 aa18.22■□□□□ 0.51
TSC2-206ENST00000439117 ACBD3Q9H3P7 528 aa18.22■□□□□ 0.51
TSC2-206ENST00000439117 TSR1Q2NL82 804 aaKnown RBP18.21■□□□□ 0.51
TSC2-206ENST00000439117 NAIPQ13075 1403 aa18.21■□□□□ 0.51
TSC2-206ENST00000439117 CCDC141Q6ZP82 1450 aa18.21■□□□□ 0.51
TSC2-206ENST00000439117 APPP05067 770 aa18.21■□□□□ 0.51
TSC2-206ENST00000439117 UNC13AQ9UPW8 1703 aa18.2■□□□□ 0.5
TSC2-206ENST00000439117 IFT57Q9NWB7 429 aa18.2■□□□□ 0.5
TSC2-206ENST00000439117 CD109Q6YHK3 1445 aa18.2■□□□□ 0.5
TSC2-206ENST00000439117 H3BQV1 296 aa18.2■□□□□ 0.5
TSC2-206ENST00000439117 IFFO2Q5TF58 517 aa18.2■□□□□ 0.5
TSC2-206ENST00000439117 RPGRIP1LQ68CZ1 1315 aa18.2■□□□□ 0.5
TSC2-206ENST00000439117 MTHFSP49914 203 aa18.19■□□□□ 0.5
TSC2-206ENST00000439117 DDX19BQ9UMR2 479 aa18.19■□□□□ 0.5
TSC2-206ENST00000439117 HMOX1P09601 288 aa18.19■□□□□ 0.5
TSC2-206ENST00000439117 MNS1Q8NEH6 495 aa18.19■□□□□ 0.5
TSC2-206ENST00000439117 EIF2S2P20042 333 aaKnown RBP18.19■□□□□ 0.5
TSC2-206ENST00000439117 BRD4O60885 1362 aaPredicted RBP18.18■□□□□ 0.5
TSC2-206ENST00000439117 HSP90B2PQ58FF3 399 aa18.18■□□□□ 0.5
TSC2-206ENST00000439117 RAPGEF4Q8WZA2 1011 aa18.18■□□□□ 0.5
TSC2-206ENST00000439117 FOXD4L6Q3SYB3 417 aaPredicted RBP18.18■□□□□ 0.5
TSC2-206ENST00000439117 FOXD4L3Q6VB84 417 aaPredicted RBP18.18■□□□□ 0.5
TSC2-206ENST00000439117 GNAI1P63096 354 aa18.17■□□□□ 0.5
TSC2-206ENST00000439117 NUTM2GQ5VZR2 741 aa18.17■□□□□ 0.5
TSC2-206ENST00000439117 MCTP1Q6DN14 999 aa18.17■□□□□ 0.5
TSC2-206ENST00000439117 PROSER2Q86WR7 435 aaPredicted RBP18.17■□□□□ 0.5
TSC2-206ENST00000439117 ANKRD30BQ9BXX2 1392 aa18.17■□□□□ 0.5
TSC2-206ENST00000439117 POGZQ7Z3K3 1410 aa18.17■□□□□ 0.5
TSC2-206ENST00000439117 NEXNQ0ZGT2 675 aa18.17■□□□□ 0.5
TSC2-206ENST00000439117 API5Q9BZZ5 524 aaKnown RBP18.17■□□□□ 0.5
TSC2-206ENST00000439117 GPRASP1Q5JY77 1395 aa18.17■□□□□ 0.5
TSC2-206ENST00000439117 FAM184AQ8NB25 1140 aa18.16■□□□□ 0.5
TSC2-206ENST00000439117 MBD3O95983 291 aa18.16■□□□□ 0.5
TSC2-206ENST00000439117 ERBINQ96RT1 1412 aa18.15■□□□□ 0.5
TSC2-206ENST00000439117 RBM10P98175 930 aaKnown RBP18.15■□□□□ 0.5
TSC2-206ENST00000439117 SLC12A5Q9H2X9 1139 aa18.15■□□□□ 0.5
TSC2-206ENST00000439117 BIVM-ERCC5R4GMW8 1640 aa18.15■□□□□ 0.5
TSC2-206ENST00000439117 MAP3K1Q13233 1512 aa18.15■□□□□ 0.5
TSC2-206ENST00000439117 ESPNB1AK53 854 aa18.15■□□□□ 0.5
TSC2-206ENST00000439117 NLRP2Q9NX02 1062 aa18.14■□□□□ 0.49
TSC2-206ENST00000439117 CAMSAP2Q08AD1 1489 aa18.14■□□□□ 0.49
TSC2-206ENST00000439117 ESCO1Q5FWF5 840 aa18.14■□□□□ 0.49
TSC2-206ENST00000439117 ADAMTS8Q9UP79 889 aa18.14■□□□□ 0.49
TSC2-206ENST00000439117 ABTB2Q8N961 1025 aa18.13■□□□□ 0.49
TSC2-206ENST00000439117 PPP2R1AP30153 589 aa18.13■□□□□ 0.49
TSC2-206ENST00000439117 DZIP1LQ8IYY4 767 aaKnown RBP18.13■□□□□ 0.49
TSC2-206ENST00000439117 BACH2Q9BYV9 841 aa18.13■□□□□ 0.49
TSC2-206ENST00000439117 IPO7O95373 1038 aaKnown RBP18.13■□□□□ 0.49
TSC2-206ENST00000439117 UBE2Q2Q8WVN8 375 aa18.13■□□□□ 0.49
TSC2-206ENST00000439117 TAF3Q5VWG9 929 aa18.13■□□□□ 0.49
TSC2-206ENST00000439117 CREBRFQ8IUR6 639 aa18.13■□□□□ 0.49
TSC2-206ENST00000439117 TSPYL4Q9UJ04 414 aa18.13■□□□□ 0.49
TSC2-206ENST00000439117 TPD52L1Q16890 204 aaPredicted RBP18.12■□□□□ 0.49
TSC2-206ENST00000439117 CDK19Q9BWU1 502 aa18.12■□□□□ 0.49
TSC2-206ENST00000439117 ABCC5O15440 1437 aa18.12■□□□□ 0.49
TSC2-206ENST00000439117 SASS6Q6UVJ0 657 aa18.12■□□□□ 0.49
TSC2-206ENST00000439117 C9orf78Q9NZ63 289 aaPredicted RBP18.12■□□□□ 0.49
TSC2-206ENST00000439117 RASSF8Q8NHQ8 419 aa18.12■□□□□ 0.49
TSC2-206ENST00000439117 RILPL2Q969X0 211 aa18.12■□□□□ 0.49
TSC2-206ENST00000439117 ANKLE2Q86XL3 938 aa18.11■□□□□ 0.49
TSC2-206ENST00000439117 NECTIN2Q92692 538 aa18.11■□□□□ 0.49
TSC2-206ENST00000439117 DDX58O95786 925 aaKnown RBP18.11■□□□□ 0.49
TSC2-206ENST00000439117 AEBP2Q6ZN18 517 aaPredicted RBP18.11■□□□□ 0.49
TSC2-206ENST00000439117 SLC26A8Q96RN1 970 aa18.11■□□□□ 0.49
TSC2-206ENST00000439117 KIF14Q15058 1648 aa18.11■□□□□ 0.49
TSC2-206ENST00000439117 ADGRL1O94910 1474 aa18.11■□□□□ 0.49
TSC2-206ENST00000439117 ZNF692Q9BU19 519 aaPredicted RBP18.1■□□□□ 0.49
TSC2-206ENST00000439117 LETM1O95202 739 aaPredicted RBP18.1■□□□□ 0.49
TSC2-206ENST00000439117 FKBP5Q13451 457 aaPredicted RBP18.1■□□□□ 0.49
TSC2-206ENST00000439117 BICD2Q8TD16 824 aa18.1■□□□□ 0.49
TSC2-206ENST00000439117 CABP1Q9NZU7 370 aa18.1■□□□□ 0.49
TSC2-206ENST00000439117 CLSTN1O94985 981 aa18.1■□□□□ 0.49
TSC2-206ENST00000439117 AK7Q96M32 723 aa18.1■□□□□ 0.49
TSC2-206ENST00000439117 SYTL4Q96C24 671 aaPredicted RBP18.1■□□□□ 0.49
TSC2-206ENST00000439117 GRPEL1Q9HAV7 217 aa18.1■□□□□ 0.49
TSC2-206ENST00000439117 CEP89Q96ST8 783 aa18.09■□□□□ 0.49
TSC2-206ENST00000439117 INTS3Q68E01 1043 aaKnown RBP18.09■□□□□ 0.49
TSC2-206ENST00000439117 TCP11L2Q8N4U5 519 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms