RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 RIMBP3Q9UFD9 1639 aa11.23□□□□□ -0.61
HMGB2-202ENST00000438704 C9orf84Q5VXU9 1444 aa11.22□□□□□ -0.61
HMGB2-202ENST00000438704 ZBED2Q9BTP6 218 aa11.22□□□□□ -0.61
HMGB2-202ENST00000438704 ABCC1P33527 1531 aa11.21□□□□□ -0.61
HMGB2-202ENST00000438704 EMILIN3Q9NT22 766 aa11.21□□□□□ -0.61
HMGB2-202ENST00000438704 BHMG1C9JSJ3 638 aaPredicted RBP11.2□□□□□ -0.62
HMGB2-202ENST00000438704 TIMELESSQ9UNS1 1208 aa11.2□□□□□ -0.62
HMGB2-202ENST00000438704 SYCP2Q9BX26 1530 aa11.19□□□□□ -0.62
HMGB2-202ENST00000438704 TSPY4P0CV99 314 aa11.19□□□□□ -0.62
HMGB2-202ENST00000438704 TSPY10P0CW01 314 aa11.19□□□□□ -0.62
HMGB2-202ENST00000438704 ADAM33Q9BZ11 813 aa11.19□□□□□ -0.62
HMGB2-202ENST00000438704 RRP7BPQ9NSQ0 103 aa11.19□□□□□ -0.62
HMGB2-202ENST00000438704 ZNF777Q9ULD5 760 aaPredicted RBP11.19□□□□□ -0.62
HMGB2-202ENST00000438704 PLXNC1O60486 1568 aa11.19□□□□□ -0.62
HMGB2-202ENST00000438704 ARHGEF12Q9NZN5 1544 aa11.19□□□□□ -0.62
HMGB2-202ENST00000438704 RTEL1-TNFRSF6BF6WH68 1400 aa11.18□□□□□ -0.62
HMGB2-202ENST00000438704 CHIC2Q9UKJ5 165 aa11.18□□□□□ -0.62
HMGB2-202ENST00000438704 GLI2P10070 1586 aa11.18□□□□□ -0.62
HMGB2-202ENST00000438704 CADPS2Q86UW7 1296 aa11.17□□□□□ -0.62
HMGB2-202ENST00000438704 KDM5DQ9BY66 1539 aa11.17□□□□□ -0.62
HMGB2-202ENST00000438704 ANKRD50Q9ULJ7 1429 aa11.17□□□□□ -0.62
HMGB2-202ENST00000438704 KDM6BO15054 1643 aa11.17□□□□□ -0.62
HMGB2-202ENST00000438704 HNRNPMP52272 730 aaKnown RBP eCLIP11.16□□□□□ -0.62
HMGB2-202ENST00000438704 FANCAO15360 1455 aa11.16□□□□□ -0.62
HMGB2-202ENST00000438704 CFAP74Q9C0B2 1584 aa11.16□□□□□ -0.62
HMGB2-202ENST00000438704 DENND4BO75064 1496 aaPredicted RBP11.15□□□□□ -0.62
HMGB2-202ENST00000438704 PPP1R3GB7ZBB8 358 aa11.15□□□□□ -0.62
HMGB2-202ENST00000438704 CAMK2BQ13554 666 aa11.15□□□□□ -0.62
HMGB2-202ENST00000438704 FBXW7Q969H0 707 aa11.15□□□□□ -0.62
HMGB2-202ENST00000438704 NBPF3Q9H094 633 aa11.15□□□□□ -0.62
HMGB2-202ENST00000438704 KIF15Q9NS87 1388 aa11.15□□□□□ -0.63
HMGB2-202ENST00000438704 MRPL50Q8N5N7 158 aaKnown RBP11.14□□□□□ -0.63
HMGB2-202ENST00000438704 PCDHGA10Q9Y5H3 936 aa11.14□□□□□ -0.63
HMGB2-202ENST00000438704 NEO1Q92859 1461 aa11.13□□□□□ -0.63
HMGB2-202ENST00000438704 CD109Q6YHK3 1445 aa11.13□□□□□ -0.63
HMGB2-202ENST00000438704 TRAPPC8Q9Y2L5 1435 aa11.13□□□□□ -0.63
HMGB2-202ENST00000438704 PHF14O94880 888 aa11.13□□□□□ -0.63
HMGB2-202ENST00000438704 THSD4Q6ZMP0 1018 aa11.13□□□□□ -0.63
HMGB2-202ENST00000438704 ERBINQ96RT1 1412 aa11.12□□□□□ -0.63
HMGB2-202ENST00000438704 CYB5RLQ6IPT4 315 aa11.12□□□□□ -0.63
HMGB2-202ENST00000438704 TYW1BQ6NUM6 668 aa11.12□□□□□ -0.63
HMGB2-202ENST00000438704 DUOX2Q9NRD8 1548 aa11.12□□□□□ -0.63
HMGB2-202ENST00000438704 PZPP20742 1482 aa11.12□□□□□ -0.63
HMGB2-202ENST00000438704 GOLGA8CPA6NN73 597 aa11.11□□□□□ -0.63
HMGB2-202ENST00000438704 BBXQ8WY36 941 aaPredicted RBP11.11□□□□□ -0.63
HMGB2-202ENST00000438704 MPHOSPH9Q99550 1183 aa11.11□□□□□ -0.63
HMGB2-202ENST00000438704 ADGRL1O94910 1474 aa11.11□□□□□ -0.63
HMGB2-202ENST00000438704 MAGI2Q86UL8 1455 aa11.11□□□□□ -0.63
HMGB2-202ENST00000438704 ZFYVE16Q7Z3T8 1539 aa11.1□□□□□ -0.63
HMGB2-202ENST00000438704 MAP3K4Q9Y6R4 1608 aa11.1□□□□□ -0.63
HMGB2-202ENST00000438704 INO80Q9ULG1 1556 aaPredicted RBP11.1□□□□□ -0.63
HMGB2-202ENST00000438704 UNC13BO14795 1591 aa11.09□□□□□ -0.63
HMGB2-202ENST00000438704 KDM5CP41229 1560 aa11.09□□□□□ -0.63
HMGB2-202ENST00000438704 ZNF518AQ6AHZ1 1483 aa11.09□□□□□ -0.63
HMGB2-202ENST00000438704 ANKRD30BQ9BXX2 1392 aa11.09□□□□□ -0.63
HMGB2-202ENST00000438704 PTPN5P54829 565 aa11.09□□□□□ -0.63
HMGB2-202ENST00000438704 WNT2BQ93097 391 aa11.09□□□□□ -0.63
HMGB2-202ENST00000438704 RABGEF1Q9UJ41 708 aa11.09□□□□□ -0.63
HMGB2-202ENST00000438704 SCAPERQ9BY12 1400 aa11.09□□□□□ -0.63
HMGB2-202ENST00000438704 IFFO2Q5TF58 517 aa11.08□□□□□ -0.64
HMGB2-202ENST00000438704 EPAS1Q99814 870 aa11.08□□□□□ -0.64
HMGB2-202ENST00000438704 POGZQ7Z3K3 1410 aa11.08□□□□□ -0.64
HMGB2-202ENST00000438704 SPAG9O60271 1321 aaKnown RBP11.08□□□□□ -0.64
HMGB2-202ENST00000438704 DIP2BQ9P265 1576 aa11.07□□□□□ -0.64
HMGB2-202ENST00000438704 MLH3Q9UHC1 1453 aa11.07□□□□□ -0.64
HMGB2-202ENST00000438704 TRIM52Q96A61 297 aa11.07□□□□□ -0.64
HMGB2-202ENST00000438704 ATP7AQ04656 1500 aa11.07□□□□□ -0.64
HMGB2-202ENST00000438704 DPYSL4O14531 572 aa11.04□□□□□ -0.64
HMGB2-202ENST00000438704 ONECUT3O60422 494 aaPredicted RBP11.04□□□□□ -0.64
HMGB2-202ENST00000438704 COL9A1P20849 921 aa11.04□□□□□ -0.64
HMGB2-202ENST00000438704 AFAP1Q8N556 730 aa11.04□□□□□ -0.64
HMGB2-202ENST00000438704 EIF2AK4Q9P2K8 1649 aaKnown RBP11.04□□□□□ -0.64
HMGB2-202ENST00000438704 RPRD2Q5VT52 1461 aaKnown RBP11.04□□□□□ -0.64
HMGB2-202ENST00000438704 NUP155O75694 1391 aa11.03□□□□□ -0.64
HMGB2-202ENST00000438704 DHX29Q7Z478 1369 aaKnown RBP11.03□□□□□ -0.64
HMGB2-202ENST00000438704 IQGAP3Q86VI3 1631 aa11.03□□□□□ -0.64
HMGB2-202ENST00000438704 PROX2Q3B8N5 592 aa11.03□□□□□ -0.64
HMGB2-202ENST00000438704 LAPTM4BQ86VI4 370 aa11.03□□□□□ -0.64
HMGB2-202ENST00000438704 SIN3AQ96ST3 1273 aa11.03□□□□□ -0.64
HMGB2-202ENST00000438704 FAM135AQ9P2D6 1515 aa11.03□□□□□ -0.64
HMGB2-202ENST00000438704 DEPDC5O75140 1603 aa11.02□□□□□ -0.64
HMGB2-202ENST00000438704 ATP10AO60312 1499 aa11.02□□□□□ -0.65
HMGB2-202ENST00000438704 PPP1R15AO75807 674 aaPredicted RBP11.02□□□□□ -0.65
HMGB2-202ENST00000438704 KIDINS220Q9ULH0 1771 aa11.02□□□□□ -0.65
HMGB2-202ENST00000438704 VWDEQ8N2E2 1590 aa11.02□□□□□ -0.65
HMGB2-202ENST00000438704 BCORL1Q5H9F3 1711 aa11.01□□□□□ -0.65
HMGB2-202ENST00000438704 TEX14Q8IWB6 1497 aa11.01□□□□□ -0.65
HMGB2-202ENST00000438704 ANKK1Q8NFD2 765 aa11.01□□□□□ -0.65
HMGB2-202ENST00000438704 ZMYM4Q5VZL5 1548 aa11□□□□□ -0.65
HMGB2-202ENST00000438704 HECW2Q9P2P5 1572 aa11□□□□□ -0.65
HMGB2-202ENST00000438704 C6orf132Q5T0Z8 1188 aa11□□□□□ -0.65
HMGB2-202ENST00000438704 TONSLQ96HA7 1378 aa11□□□□□ -0.65
HMGB2-202ENST00000438704 PPRC1Q5VV67 1664 aaKnown RBP10.99□□□□□ -0.65
HMGB2-202ENST00000438704 RGS20O76081 388 aa10.99□□□□□ -0.65
HMGB2-202ENST00000438704 PRDM15P57071 1507 aaPredicted RBP10.99□□□□□ -0.65
HMGB2-202ENST00000438704 RICTORQ6R327 1708 aa10.98□□□□□ -0.65
HMGB2-202ENST00000438704 FAM69CQ0P6D2 419 aa10.98□□□□□ -0.65
HMGB2-202ENST00000438704 PDIA6Q15084 440 aa10.98□□□□□ -0.65
HMGB2-202ENST00000438704 AMER1Q5JTC6 1135 aaPredicted RBP10.98□□□□□ -0.65
HMGB2-202ENST00000438704 SPRYD3Q8NCJ5 442 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms