RNA–Protein interactions for RNA: ENST00000438661.2

KCNC4-204, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC4, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-204ENST00000438661 TRAPPC8Q9Y2L5 1435 aa22.76■■□□□ 1.23
KCNC4-204ENST00000438661 AFAP1Q8N556 730 aa22.76■■□□□ 1.23
KCNC4-204ENST00000438661 ERCC6L2Q5T890 1561 aa22.75■■□□□ 1.23
KCNC4-204ENST00000438661 HSP90AB1P08238 724 aaKnown RBP22.75■■□□□ 1.23
KCNC4-204ENST00000438661 RARSP54136 660 aaKnown RBP22.75■■□□□ 1.23
KCNC4-204ENST00000438661 CDCA8Q53HL2 280 aa22.75■■□□□ 1.23
KCNC4-204ENST00000438661 A0A0U1RQG5 324 aaPredicted RBP22.74■■□□□ 1.23
KCNC4-204ENST00000438661 MSNP26038 577 aaKnown RBP22.74■■□□□ 1.23
KCNC4-204ENST00000438661 MADDQ8WXG6 1647 aa22.73■■□□□ 1.23
KCNC4-204ENST00000438661 R3HCC1Q9Y3T6 440 aaKnown RBP22.73■■□□□ 1.23
KCNC4-204ENST00000438661 ANP32BQ92688 251 aaKnown RBP22.73■■□□□ 1.23
KCNC4-204ENST00000438661 PLCH2O75038 1416 aa22.72■■□□□ 1.23
KCNC4-204ENST00000438661 ZNF692Q9BU19 519 aaPredicted RBP22.72■■□□□ 1.23
KCNC4-204ENST00000438661 NASPP49321 788 aaPredicted RBP22.72■■□□□ 1.23
KCNC4-204ENST00000438661 GBP4Q96PP9 640 aa22.71■■□□□ 1.23
KCNC4-204ENST00000438661 SCAF11Q99590 1463 aaKnown RBP22.71■■□□□ 1.23
KCNC4-204ENST00000438661 SPAG9O60271 1321 aaKnown RBP22.71■■□□□ 1.23
KCNC4-204ENST00000438661 ASXL1Q8IXJ9 1541 aa22.7■■□□□ 1.22
KCNC4-204ENST00000438661 ABCC2Q92887 1545 aa22.7■■□□□ 1.22
KCNC4-204ENST00000438661 IQGAP1P46940 1657 aa22.7■■□□□ 1.22
KCNC4-204ENST00000438661 ISY1Q9ULR0 285 aaKnown RBP22.7■■□□□ 1.22
KCNC4-204ENST00000438661 ZSCAN30Q86W11 494 aa22.69■■□□□ 1.22
KCNC4-204ENST00000438661 FTSJ3Q8IY81 847 aaKnown RBP22.69■■□□□ 1.22
KCNC4-204ENST00000438661 CHD1O14646 1710 aa22.69■■□□□ 1.22
KCNC4-204ENST00000438661 NCLP19338 710 aaKnown RBP22.68■■□□□ 1.22
KCNC4-204ENST00000438661 RIPK4P57078 832 aa22.68■■□□□ 1.22
KCNC4-204ENST00000438661 CFAP70Q5T0N1 1121 aa22.67■■□□□ 1.22
KCNC4-204ENST00000438661 PIK3C2GO75747 1445 aa22.67■■□□□ 1.22
KCNC4-204ENST00000438661 SYNMO15061 1565 aa22.66■■□□□ 1.22
KCNC4-204ENST00000438661 ZBTB7CA1YPR0 619 aa22.66■■□□□ 1.22
KCNC4-204ENST00000438661 CCDC173Q0VFZ6 552 aa22.66■■□□□ 1.22
KCNC4-204ENST00000438661 CALD1Q05682 793 aaKnown RBP22.65■■□□□ 1.22
KCNC4-204ENST00000438661 OFD1O75665 1012 aa22.65■■□□□ 1.22
KCNC4-204ENST00000438661 DDX49Q9Y6V7 483 aaKnown RBP22.65■■□□□ 1.22
KCNC4-204ENST00000438661 CARD14Q9BXL6 1004 aa22.64■■□□□ 1.21
KCNC4-204ENST00000438661 NINLQ9Y2I6 1382 aa22.64■■□□□ 1.21
KCNC4-204ENST00000438661 PRDM4Q9UKN5 801 aa22.63■■□□□ 1.21
KCNC4-204ENST00000438661 SCAPERQ9BY12 1400 aa22.63■■□□□ 1.21
KCNC4-204ENST00000438661 XPCQ01831 940 aaPredicted RBP22.63■■□□□ 1.21
KCNC4-204ENST00000438661 SKOR2Q2VWA4 1001 aaPredicted RBP22.62■■□□□ 1.21
KCNC4-204ENST00000438661 TRPM2O94759 1503 aa22.62■■□□□ 1.21
KCNC4-204ENST00000438661 ABCC1P33527 1531 aa22.62■■□□□ 1.21
KCNC4-204ENST00000438661 CLTCL1P53675 1640 aa22.62■■□□□ 1.21
KCNC4-204ENST00000438661 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.62■■□□□ 1.21
KCNC4-204ENST00000438661 PRDM10Q9NQV6 1147 aa22.62■■□□□ 1.21
KCNC4-204ENST00000438661 TCP11L2Q8N4U5 519 aa22.62■■□□□ 1.21
KCNC4-204ENST00000438661 RTEL1-TNFRSF6BF6WH68 1400 aa22.61■■□□□ 1.21
KCNC4-204ENST00000438661 SSFA2P28290 1259 aa22.61■■□□□ 1.21
KCNC4-204ENST00000438661 SPHKAPQ2M3C7 1700 aa22.61■■□□□ 1.21
KCNC4-204ENST00000438661 MVPQ14764 893 aaKnown RBP22.61■■□□□ 1.21
KCNC4-204ENST00000438661 PTPRTO14522 1441 aa22.6■■□□□ 1.21
KCNC4-204ENST00000438661 MYOM1P52179 1685 aa22.6■■□□□ 1.21
KCNC4-204ENST00000438661 SHROOM2Q13796 1616 aa22.6■■□□□ 1.21
KCNC4-204ENST00000438661 KIF3BO15066 747 aa22.6■■□□□ 1.21
KCNC4-204ENST00000438661 ITPRIPQ8IWB1 547 aa22.6■■□□□ 1.21
KCNC4-204ENST00000438661 CD2BP2O95400 341 aaKnown RBP22.59■■□□□ 1.21
KCNC4-204ENST00000438661 RAB3GAP1Q15042 981 aa22.59■■□□□ 1.21
KCNC4-204ENST00000438661 NPC1L1Q9UHC9 1359 aa22.59■■□□□ 1.21
KCNC4-204ENST00000438661 ADGRF5Q8IZF2 1346 aa22.59■■□□□ 1.21
KCNC4-204ENST00000438661 STAC3Q96MF2 364 aa22.59■■□□□ 1.21
KCNC4-204ENST00000438661 RBM42Q9BTD8 480 aaKnown RBP22.59■■□□□ 1.21
KCNC4-204ENST00000438661 CLASP1Q7Z460 1538 aa22.58■■□□□ 1.21
KCNC4-204ENST00000438661 LNPKQ9C0E8 428 aa22.58■■□□□ 1.21
KCNC4-204ENST00000438661 DDIT3P35638 169 aa22.58■■□□□ 1.2
KCNC4-204ENST00000438661 DZIP1LQ8IYY4 767 aaKnown RBP22.58■■□□□ 1.2
KCNC4-204ENST00000438661 CEP152O94986 1710 aa22.58■■□□□ 1.2
KCNC4-204ENST00000438661 UQCRHLA0A096LP55 91 aa22.57■■□□□ 1.2
KCNC4-204ENST00000438661 UQCRHP07919 91 aa22.57■■□□□ 1.2
KCNC4-204ENST00000438661 GOLGA6L22H0YM25 854 aa22.57■■□□□ 1.2
KCNC4-204ENST00000438661 PPP1R9BQ96SB3 815 aa22.56■■□□□ 1.2
KCNC4-204ENST00000438661 ZHX1Q9UKY1 873 aaPredicted RBP22.56■■□□□ 1.2
KCNC4-204ENST00000438661 SMC5Q8IY18 1101 aa22.56■■□□□ 1.2
KCNC4-204ENST00000438661 ZCCHC11Q5TAX3 1644 aaKnown RBP22.56■■□□□ 1.2
KCNC4-204ENST00000438661 ZKSCAN2Q63HK3 967 aa22.56■■□□□ 1.2
KCNC4-204ENST00000438661 AAMPQ13685 434 aa22.55■■□□□ 1.2
KCNC4-204ENST00000438661 CAVIN1Q6NZI2 390 aaKnown RBP22.54■■□□□ 1.2
KCNC4-204ENST00000438661 ERVK-7P63135 1459 aa22.54■■□□□ 1.2
KCNC4-204ENST00000438661 TSR2Q969E8 191 aaKnown RBP22.54■■□□□ 1.2
KCNC4-204ENST00000438661 KDM5AP29375 1690 aaKnown RBP22.54■■□□□ 1.2
KCNC4-204ENST00000438661 UGGT1Q9NYU2 1555 aa22.53■■□□□ 1.2
KCNC4-204ENST00000438661 SMC4Q9NTJ3 1288 aa22.53■■□□□ 1.2
KCNC4-204ENST00000438661 KANK1Q14678 1352 aa22.53■■□□□ 1.2
KCNC4-204ENST00000438661 ZFYVE16Q7Z3T8 1539 aa22.52■■□□□ 1.2
KCNC4-204ENST00000438661 MCTP1Q6DN14 999 aa22.52■■□□□ 1.2
KCNC4-204ENST00000438661 RUNDC1Q96C34 613 aa22.52■■□□□ 1.2
KCNC4-204ENST00000438661 CIZ1Q9ULV3 898 aaPredicted RBP22.52■■□□□ 1.2
KCNC4-204ENST00000438661 NGEFQ8N5V2 710 aa22.51■■□□□ 1.19
KCNC4-204ENST00000438661 SNX21Q969T3 373 aa22.51■■□□□ 1.19
KCNC4-204ENST00000438661 RBM25P49756 843 aaKnown RBP22.5■■□□□ 1.19
KCNC4-204ENST00000438661 GAS2L2Q8NHY3 880 aa22.5■■□□□ 1.19
KCNC4-204ENST00000438661 ZMYM3Q14202 1370 aa22.5■■□□□ 1.19
KCNC4-204ENST00000438661 MORC1Q86VD1 984 aa22.49■■□□□ 1.19
KCNC4-204ENST00000438661 CHGAP10645 457 aaKnown RBP22.48■■□□□ 1.19
KCNC4-204ENST00000438661 BAG4O95429 457 aaKnown RBP22.48■■□□□ 1.19
KCNC4-204ENST00000438661 K7ELQ4 463 aaPredicted RBP22.47■■□□□ 1.19
KCNC4-204ENST00000438661 TRIM27P14373 513 aa22.47■■□□□ 1.19
KCNC4-204ENST00000438661 NCOA3Q9Y6Q9 1424 aa22.47■■□□□ 1.19
KCNC4-204ENST00000438661 TET3O43151 1660 aa22.47■■□□□ 1.19
KCNC4-204ENST00000438661 MAP7D2Q96T17 732 aa22.47■■□□□ 1.19
KCNC4-204ENST00000438661 KLHL40Q2TBA0 621 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms