RNA–Protein interactions for RNA: ENST00000438547.6

SEMA4D-211, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-211ENST00000438547 G3BP1Q13283 466 aaKnown RBP eCLIP13.57□□□□□ -0.24
SEMA4D-211ENST00000438547 CCDC39Q9UFE4 941 aa13.56□□□□□ -0.24
SEMA4D-211ENST00000438547 EFCAB5A4FU69 1503 aa13.56□□□□□ -0.24
SEMA4D-211ENST00000438547 MBD3O95983 291 aa13.56□□□□□ -0.24
SEMA4D-211ENST00000438547 RABEP1Q15276 862 aa13.56□□□□□ -0.24
SEMA4D-211ENST00000438547 PRDM2Q13029 1718 aa13.56□□□□□ -0.24
SEMA4D-211ENST00000438547 LRRFIP1Q32MZ4 808 aaKnown RBP13.56□□□□□ -0.24
SEMA4D-211ENST00000438547 SASS6Q6UVJ0 657 aa13.56□□□□□ -0.24
SEMA4D-211ENST00000438547 TSR2Q969E8 191 aaKnown RBP13.56□□□□□ -0.24
SEMA4D-211ENST00000438547 GCC1Q96CN9 775 aa13.56□□□□□ -0.24
SEMA4D-211ENST00000438547 NAIPQ13075 1403 aa13.56□□□□□ -0.24
SEMA4D-211ENST00000438547 TPD52L1Q16890 204 aaPredicted RBP13.56□□□□□ -0.24
SEMA4D-211ENST00000438547 ZNF771Q7L3S4 317 aaPredicted RBP13.56□□□□□ -0.24
SEMA4D-211ENST00000438547 ERC2O15083 957 aa13.55□□□□□ -0.24
SEMA4D-211ENST00000438547 NEK4P51957 841 aa13.55□□□□□ -0.24
SEMA4D-211ENST00000438547 SLC12A5Q9H2X9 1139 aa13.55□□□□□ -0.24
SEMA4D-211ENST00000438547 NOB1Q9ULX3 412 aaKnown RBP13.55□□□□□ -0.24
SEMA4D-211ENST00000438547 EHBP1L1Q8N3D4 1523 aa13.55□□□□□ -0.24
SEMA4D-211ENST00000438547 C11orf95C9JLR9 678 aaPredicted RBP13.55□□□□□ -0.24
SEMA4D-211ENST00000438547 PRPF40AO75400 957 aaKnown RBP13.55□□□□□ -0.24
SEMA4D-211ENST00000438547 PRKAR2BP31323 418 aa13.55□□□□□ -0.24
SEMA4D-211ENST00000438547 WDR63Q8IWG1 891 aa13.55□□□□□ -0.24
SEMA4D-211ENST00000438547 AFAP1Q8N556 730 aa13.55□□□□□ -0.24
SEMA4D-211ENST00000438547 NINLQ9Y2I6 1382 aa13.54□□□□□ -0.24
SEMA4D-211ENST00000438547 PES1O00541 588 aaKnown RBP13.54□□□□□ -0.24
SEMA4D-211ENST00000438547 CPLX1O14810 134 aa13.54□□□□□ -0.24
SEMA4D-211ENST00000438547 DDX58O95786 925 aaKnown RBP13.54□□□□□ -0.24
SEMA4D-211ENST00000438547 TSR1Q2NL82 804 aaKnown RBP13.53□□□□□ -0.24
SEMA4D-211ENST00000438547 C1orf115Q9H7X2 142 aa13.53□□□□□ -0.24
SEMA4D-211ENST00000438547 TOP2BQ02880 1626 aa13.53□□□□□ -0.24
SEMA4D-211ENST00000438547 IFT57Q9NWB7 429 aa13.53□□□□□ -0.24
SEMA4D-211ENST00000438547 TPM1P09493 284 aa13.53□□□□□ -0.24
SEMA4D-211ENST00000438547 MCM2P49736 904 aa13.53□□□□□ -0.24
SEMA4D-211ENST00000438547 AKAP17AQ02040 695 aaKnown RBP13.53□□□□□ -0.24
SEMA4D-211ENST00000438547 SYNE3Q6ZMZ3 975 aa13.53□□□□□ -0.24
SEMA4D-211ENST00000438547 HOMER1Q86YM7 354 aa13.53□□□□□ -0.24
SEMA4D-211ENST00000438547 SCAPERQ9BY12 1400 aa13.53□□□□□ -0.24
SEMA4D-211ENST00000438547 UBTFL1P0CB47 393 aaPredicted RBP13.53□□□□□ -0.24
SEMA4D-211ENST00000438547 MVPQ14764 893 aaKnown RBP13.53□□□□□ -0.24
SEMA4D-211ENST00000438547 MAP7D2Q96T17 732 aa13.53□□□□□ -0.24
SEMA4D-211ENST00000438547 CCDC173Q0VFZ6 552 aa13.52□□□□□ -0.24
SEMA4D-211ENST00000438547 TWISTNBQ3B726 338 aaPredicted RBP13.52□□□□□ -0.24
SEMA4D-211ENST00000438547 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.52□□□□□ -0.24
SEMA4D-211ENST00000438547 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.52□□□□□ -0.24
SEMA4D-211ENST00000438547 CT47B1P0C2W7 299 aaPredicted RBP13.52□□□□□ -0.24
SEMA4D-211ENST00000438547 C9orf84Q5VXU9 1444 aa13.52□□□□□ -0.24
SEMA4D-211ENST00000438547 ATF7IPQ6VMQ6 1270 aa13.52□□□□□ -0.24
SEMA4D-211ENST00000438547 A0A0U1RQG5 324 aaPredicted RBP13.52□□□□□ -0.25
SEMA4D-211ENST00000438547 GNAI3P08754 354 aa13.52□□□□□ -0.25
SEMA4D-211ENST00000438547 MCM4P33991 863 aa13.52□□□□□ -0.25
SEMA4D-211ENST00000438547 CCDC73Q6ZRK6 1079 aa13.52□□□□□ -0.25
SEMA4D-211ENST00000438547 ERBINQ96RT1 1412 aa13.52□□□□□ -0.25
SEMA4D-211ENST00000438547 TPM2P07951 284 aa13.52□□□□□ -0.25
SEMA4D-211ENST00000438547 SLFN5Q08AF3 891 aa13.52□□□□□ -0.25
SEMA4D-211ENST00000438547 TTC5Q8N0Z6 440 aa13.52□□□□□ -0.25
SEMA4D-211ENST00000438547 GPS2Q13227 327 aa13.51□□□□□ -0.25
SEMA4D-211ENST00000438547 TRIM29Q14134 588 aa13.51□□□□□ -0.25
SEMA4D-211ENST00000438547 MTERF4Q7Z6M4 381 aaKnown RBP13.51□□□□□ -0.25
SEMA4D-211ENST00000438547 GRPEL1Q9HAV7 217 aa13.51□□□□□ -0.25
SEMA4D-211ENST00000438547 DAPK1P53355 1430 aa13.5□□□□□ -0.25
SEMA4D-211ENST00000438547 SURF6O75683 361 aaKnown RBP13.5□□□□□ -0.25
SEMA4D-211ENST00000438547 K7ELQ4 463 aaPredicted RBP13.49□□□□□ -0.25
SEMA4D-211ENST00000438547 TRDNQ13061 729 aa13.49□□□□□ -0.25
SEMA4D-211ENST00000438547 TSPY26PQ9H489 355 aa13.49□□□□□ -0.25
SEMA4D-211ENST00000438547 CWC22Q9HCG8 908 aaKnown RBP13.49□□□□□ -0.25
SEMA4D-211ENST00000438547 GTF2E1P29083 439 aaPredicted RBP13.48□□□□□ -0.25
SEMA4D-211ENST00000438547 CNTROBQ8N137 903 aa13.48□□□□□ -0.25
SEMA4D-211ENST00000438547 CLASRPQ8N2M8 674 aaKnown RBP13.48□□□□□ -0.25
SEMA4D-211ENST00000438547 PRG4Q92954 1404 aaPredicted RBP13.48□□□□□ -0.25
SEMA4D-211ENST00000438547 LETM1O95202 739 aaPredicted RBP13.48□□□□□ -0.25
SEMA4D-211ENST00000438547 APPP05067 770 aa13.48□□□□□ -0.25
SEMA4D-211ENST00000438547 GRIN2BQ13224 1484 aa13.48□□□□□ -0.25
SEMA4D-211ENST00000438547 FBXW7Q969H0 707 aa13.48□□□□□ -0.25
SEMA4D-211ENST00000438547 CIZ1Q9ULV3 898 aaPredicted RBP13.48□□□□□ -0.25
SEMA4D-211ENST00000438547 TROQ12816 1431 aaPredicted RBP13.48□□□□□ -0.25
SEMA4D-211ENST00000438547 ARHGAP5Q13017 1502 aa13.48□□□□□ -0.25
SEMA4D-211ENST00000438547 CCDC27Q2M243 656 aa13.48□□□□□ -0.25
SEMA4D-211ENST00000438547 CHD1LQ86WJ1 897 aa13.47□□□□□ -0.25
SEMA4D-211ENST00000438547 MARCH6O60337 910 aa13.47□□□□□ -0.25
SEMA4D-211ENST00000438547 PSMA5P28066 241 aa13.47□□□□□ -0.25
SEMA4D-211ENST00000438547 FOSBP53539 338 aa13.47□□□□□ -0.25
SEMA4D-211ENST00000438547 C20orf194Q5TEA3 1177 aa13.47□□□□□ -0.25
SEMA4D-211ENST00000438547 WWC1Q8IX03 1113 aa13.47□□□□□ -0.25
SEMA4D-211ENST00000438547 SKAP1Q86WV1 359 aa13.47□□□□□ -0.25
SEMA4D-211ENST00000438547 CCDC30Q5VVM6 783 aa13.46□□□□□ -0.25
SEMA4D-211ENST00000438547 HOOK1Q9UJC3 728 aaKnown RBP13.46□□□□□ -0.25
SEMA4D-211ENST00000438547 TEX35Q5T0J7 233 aa13.46□□□□□ -0.25
SEMA4D-211ENST00000438547 ANKRD30BQ9BXX2 1392 aa13.46□□□□□ -0.25
SEMA4D-211ENST00000438547 SDF4Q9BRK5 362 aa13.46□□□□□ -0.26
SEMA4D-211ENST00000438547 ESPNB1AK53 854 aa13.46□□□□□ -0.26
SEMA4D-211ENST00000438547 TRIM5Q9C035 493 aa13.46□□□□□ -0.26
SEMA4D-211ENST00000438547 FIBPO43427 364 aa13.45□□□□□ -0.26
SEMA4D-211ENST00000438547 IPO7O95373 1038 aaKnown RBP13.45□□□□□ -0.26
SEMA4D-211ENST00000438547 GNAI2P04899 355 aa13.45□□□□□ -0.26
SEMA4D-211ENST00000438547 HMGN5P82970 282 aaKnown RBP13.45□□□□□ -0.26
SEMA4D-211ENST00000438547 PDCP20941 246 aa13.45□□□□□ -0.26
SEMA4D-211ENST00000438547 ANKRD20A12PQ8NF67 263 aa13.45□□□□□ -0.26
SEMA4D-211ENST00000438547 SYNJ2O15056 1496 aa13.45□□□□□ -0.26
SEMA4D-211ENST00000438547 CCDC70Q6NSX1 233 aa13.45□□□□□ -0.26
SEMA4D-211ENST00000438547 MNS1Q8NEH6 495 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms