RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 CCDC47Q96A33 483 aaKnown RBP12.57□□□□□ -0.4
SHPRH-206ENST00000438092 DDX11L8A8MPP1 907 aa12.57□□□□□ -0.4
SHPRH-206ENST00000438092 ATP2B1P20020 1258 aa12.57□□□□□ -0.4
SHPRH-206ENST00000438092 PANK1Q8TE04 598 aa12.56□□□□□ -0.4
SHPRH-206ENST00000438092 CADPSQ9ULU8 1353 aa12.56□□□□□ -0.4
SHPRH-206ENST00000438092 ATP6V1DQ9Y5K8 247 aa12.55□□□□□ -0.4
SHPRH-206ENST00000438092 RALYLQ86SE5 291 aaKnown RBP12.55□□□□□ -0.4
SHPRH-206ENST00000438092 CT47A1Q5JQC4 288 aaPredicted RBP12.55□□□□□ -0.4
SHPRH-206ENST00000438092 DDX19BQ9UMR2 479 aa12.55□□□□□ -0.4
SHPRH-206ENST00000438092 IBSPP21815 317 aaPredicted RBP12.55□□□□□ -0.4
SHPRH-206ENST00000438092 TTLL5Q6EMB2 1281 aa12.55□□□□□ -0.4
SHPRH-206ENST00000438092 HOMER1Q86YM7 354 aa12.55□□□□□ -0.4
SHPRH-206ENST00000438092 SMC3Q9UQE7 1217 aa12.55□□□□□ -0.4
SHPRH-206ENST00000438092 RUSC2Q8N2Y8 1516 aa12.54□□□□□ -0.4
SHPRH-206ENST00000438092 RNF20Q5VTR2 975 aa12.54□□□□□ -0.4
SHPRH-206ENST00000438092 REC8O95072 547 aa12.54□□□□□ -0.4
SHPRH-206ENST00000438092 PROSER2Q86WR7 435 aaPredicted RBP12.54□□□□□ -0.4
SHPRH-206ENST00000438092 C1orf115Q9H7X2 142 aa12.54□□□□□ -0.4
SHPRH-206ENST00000438092 SF3B2Q13435 895 aaKnown RBP12.53□□□□□ -0.4
SHPRH-206ENST00000438092 ODF2Q5BJF6 829 aa12.53□□□□□ -0.4
SHPRH-206ENST00000438092 KIF6Q6ZMV9 814 aa12.53□□□□□ -0.4
SHPRH-206ENST00000438092 R3HCC1Q9Y3T6 440 aaKnown RBP12.53□□□□□ -0.4
SHPRH-206ENST00000438092 IPO7O95373 1038 aaKnown RBP12.53□□□□□ -0.4
SHPRH-206ENST00000438092 XPCQ01831 940 aaPredicted RBP12.53□□□□□ -0.4
SHPRH-206ENST00000438092 UBTFL1P0CB47 393 aaPredicted RBP12.53□□□□□ -0.4
SHPRH-206ENST00000438092 EPS15P42566 896 aa12.53□□□□□ -0.4
SHPRH-206ENST00000438092 ANKRD20A12PQ8NF67 263 aa12.53□□□□□ -0.4
SHPRH-206ENST00000438092 RUNDC1Q96C34 613 aa12.53□□□□□ -0.4
SHPRH-206ENST00000438092 FANCD2Q9BXW9 1451 aa12.53□□□□□ -0.4
SHPRH-206ENST00000438092 API5Q9BZZ5 524 aaKnown RBP12.53□□□□□ -0.4
SHPRH-206ENST00000438092 PRKRIP1Q9H875 184 aaPredicted RBP12.53□□□□□ -0.4
SHPRH-206ENST00000438092 SKIDA1Q1XH10 827 aa12.52□□□□□ -0.4
SHPRH-206ENST00000438092 SAFBQ15424 915 aaKnown RBP eCLIP12.52□□□□□ -0.4
SHPRH-206ENST00000438092 CCDC70Q6NSX1 233 aa12.52□□□□□ -0.4
SHPRH-206ENST00000438092 TXNDC2Q86VQ3 553 aa12.52□□□□□ -0.41
SHPRH-206ENST00000438092 MAP4K4O95819 1239 aaPredicted RBP12.51□□□□□ -0.41
SHPRH-206ENST00000438092 RBM5P52756 815 aaKnown RBP eCLIP12.51□□□□□ -0.41
SHPRH-206ENST00000438092 SPINK5Q9NQ38 1064 aaPredicted RBP12.51□□□□□ -0.41
SHPRH-206ENST00000438092 MYL6BP14649 208 aa12.51□□□□□ -0.41
SHPRH-206ENST00000438092 SIL1Q9H173 461 aa12.51□□□□□ -0.41
SHPRH-206ENST00000438092 PDILTQ8N807 584 aa12.51□□□□□ -0.41
SHPRH-206ENST00000438092 FSD1Q9BTV5 496 aa12.51□□□□□ -0.41
SHPRH-206ENST00000438092 CNNM1Q9NRU3 951 aa12.51□□□□□ -0.41
SHPRH-206ENST00000438092 DHX57Q6P158 1386 aaKnown RBP12.51□□□□□ -0.41
SHPRH-206ENST00000438092 PAF1Q8N7H5 531 aa12.51□□□□□ -0.41
SHPRH-206ENST00000438092 SASS6Q6UVJ0 657 aa12.5□□□□□ -0.41
SHPRH-206ENST00000438092 HOOK1Q9UJC3 728 aaKnown RBP12.5□□□□□ -0.41
SHPRH-206ENST00000438092 ERC2O15083 957 aa12.5□□□□□ -0.41
SHPRH-206ENST00000438092 CEBPZQ03701 1054 aaKnown RBP12.5□□□□□ -0.41
SHPRH-206ENST00000438092 TOM1L2Q6ZVM7 507 aa12.5□□□□□ -0.41
SHPRH-206ENST00000438092 INTS3Q68E01 1043 aaKnown RBP12.49□□□□□ -0.41
SHPRH-206ENST00000438092 TOP2AP11388 1531 aaKnown RBP12.49□□□□□ -0.41
SHPRH-206ENST00000438092 BICDL1Q6ZP65 573 aa12.49□□□□□ -0.41
SHPRH-206ENST00000438092 GNAI1P63096 354 aa12.49□□□□□ -0.41
SHPRH-206ENST00000438092 MTHFSP49914 203 aa12.49□□□□□ -0.41
SHPRH-206ENST00000438092 ROCK1Q13464 1354 aa12.49□□□□□ -0.41
SHPRH-206ENST00000438092 SURF6O75683 361 aaKnown RBP12.48□□□□□ -0.41
SHPRH-206ENST00000438092 GPRASP1Q5JY77 1395 aa12.48□□□□□ -0.41
SHPRH-206ENST00000438092 HSP90AB2PQ58FF8 381 aa12.48□□□□□ -0.41
SHPRH-206ENST00000438092 AFAP1Q8N556 730 aa12.48□□□□□ -0.41
SHPRH-206ENST00000438092 BRPF1P55201 1214 aaPredicted RBP12.47□□□□□ -0.41
SHPRH-206ENST00000438092 TTC39AQ5SRH9 613 aa12.47□□□□□ -0.41
SHPRH-206ENST00000438092 RAD54L2Q9Y4B4 1467 aa12.47□□□□□ -0.41
SHPRH-206ENST00000438092 CCDC85AQ96PX6 553 aaPredicted RBP12.47□□□□□ -0.41
SHPRH-206ENST00000438092 PRAM1Q96QH2 718 aa12.47□□□□□ -0.41
SHPRH-206ENST00000438092 BRMS1Q9HCU9 246 aa12.47□□□□□ -0.41
SHPRH-206ENST00000438092 ARHGAP5Q13017 1502 aa12.46□□□□□ -0.41
SHPRH-206ENST00000438092 CABP4P57796 275 aa12.46□□□□□ -0.41
SHPRH-206ENST00000438092 OFD1O75665 1012 aa12.46□□□□□ -0.41
SHPRH-206ENST00000438092 TBC1D2BQ9UPU7 963 aa12.46□□□□□ -0.41
SHPRH-206ENST00000438092 STK3Q13188 491 aa12.46□□□□□ -0.42
SHPRH-206ENST00000438092 CFAP70Q5T0N1 1121 aa12.46□□□□□ -0.42
SHPRH-206ENST00000438092 CCDC73Q6ZRK6 1079 aa12.46□□□□□ -0.42
SHPRH-206ENST00000438092 PIBF1Q8WXW3 757 aa12.46□□□□□ -0.42
SHPRH-206ENST00000438092 CNTROBQ8N137 903 aa12.45□□□□□ -0.42
SHPRH-206ENST00000438092 FMNL2Q96PY5 1086 aa12.45□□□□□ -0.42
SHPRH-206ENST00000438092 ZHX3Q9H4I2 956 aa12.45□□□□□ -0.42
SHPRH-206ENST00000438092 PRKAR2BP31323 418 aa12.44□□□□□ -0.42
SHPRH-206ENST00000438092 MIA2Q96PC5 1412 aa12.44□□□□□ -0.42
SHPRH-206ENST00000438092 HSP90AB4PQ58FF6 505 aa12.44□□□□□ -0.42
SHPRH-206ENST00000438092 IFT57Q9NWB7 429 aa12.44□□□□□ -0.42
SHPRH-206ENST00000438092 SETQ01105 290 aaPredicted RBP12.44□□□□□ -0.42
SHPRH-206ENST00000438092 ZNF771Q7L3S4 317 aaPredicted RBP12.44□□□□□ -0.42
SHPRH-206ENST00000438092 CDK5RAP3Q96JB5 506 aa12.44□□□□□ -0.42
SHPRH-206ENST00000438092 SKOR2Q2VWA4 1001 aaPredicted RBP12.44□□□□□ -0.42
SHPRH-206ENST00000438092 CCDC30Q5VVM6 783 aa12.44□□□□□ -0.42
SHPRH-206ENST00000438092 RNF214Q8ND24 703 aa12.44□□□□□ -0.42
SHPRH-206ENST00000438092 TATP17735 454 aaPredicted RBP12.43□□□□□ -0.42
SHPRH-206ENST00000438092 PLEKHO1Q53GL0 409 aaPredicted RBP12.43□□□□□ -0.42
SHPRH-206ENST00000438092 SLC26A8Q96RN1 970 aa12.43□□□□□ -0.42
SHPRH-206ENST00000438092 CHMP4BP1P59074 171 aa12.43□□□□□ -0.42
SHPRH-206ENST00000438092 AQRO60306 1485 aaKnown RBP eCLIP12.43□□□□□ -0.425e-10■■■■■ 39.2
SHPRH-206ENST00000438092 KRT18P05783 430 aaKnown RBP12.43□□□□□ -0.42
SHPRH-206ENST00000438092 OLFM4Q6UX06 510 aa12.43□□□□□ -0.42
SHPRH-206ENST00000438092 TSR2Q969E8 191 aaKnown RBP12.43□□□□□ -0.42
SHPRH-206ENST00000438092 ADAMTS8Q9UP79 889 aa12.43□□□□□ -0.42
SHPRH-206ENST00000438092 NINLQ9Y2I6 1382 aa12.43□□□□□ -0.42
SHPRH-206ENST00000438092 ZBED9Q6R2W3 1325 aa12.43□□□□□ -0.42
SHPRH-206ENST00000438092 XBP1P17861 261 aa12.43□□□□□ -0.42
SHPRH-206ENST00000438092 ZSCAN29Q8IWY8 852 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms