RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 C8orf34Q49A92 452 aa21.49■■□□□ 1.03
TTC3-209ENST00000438055 MAPK8IP3Q9UPT6 1336 aa21.49■■□□□ 1.03
TTC3-209ENST00000438055 KDM5AP29375 1690 aaKnown RBP21.49■■□□□ 1.03
TTC3-209ENST00000438055 TNNQ9UQP3 1299 aa21.48■■□□□ 1.03
TTC3-209ENST00000438055 ZNF518AQ6AHZ1 1483 aa21.48■■□□□ 1.03
TTC3-209ENST00000438055 MYH16Q9H6N6 1097 aa21.47■■□□□ 1.03
TTC3-209ENST00000438055 POLR3AO14802 1390 aaPredicted RBP21.47■■□□□ 1.03
TTC3-209ENST00000438055 RARSP54136 660 aaKnown RBP21.46■■□□□ 1.03
TTC3-209ENST00000438055 TSR2Q969E8 191 aaKnown RBP21.46■■□□□ 1.03
TTC3-209ENST00000438055 NPATQ14207 1427 aa21.46■■□□□ 1.03
TTC3-209ENST00000438055 CEP152O94986 1710 aa21.46■■□□□ 1.03
TTC3-209ENST00000438055 ARAP3Q8WWN8 1544 aa21.45■■□□□ 1.02
TTC3-209ENST00000438055 IDI1Q13907 227 aa21.45■■□□□ 1.02
TTC3-209ENST00000438055 UPF2Q9HAU5 1272 aaKnown RBP21.45■■□□□ 1.02
TTC3-209ENST00000438055 RTN4Q9NQC3 1192 aaKnown RBP21.45■■□□□ 1.02
TTC3-209ENST00000438055 USP35Q9P2H5 1018 aa21.45■■□□□ 1.02
TTC3-209ENST00000438055 MYOM2P54296 1465 aa21.44■■□□□ 1.02
TTC3-209ENST00000438055 MAP3K4Q9Y6R4 1608 aa21.43■■□□□ 1.02
TTC3-209ENST00000438055 NFKBIBQ15653 356 aa21.43■■□□□ 1.02
TTC3-209ENST00000438055 SMC4Q9NTJ3 1288 aa21.43■■□□□ 1.02
TTC3-209ENST00000438055 RPGRIP1LQ68CZ1 1315 aa21.43■■□□□ 1.02
TTC3-209ENST00000438055 ABCA6Q8N139 1617 aa21.43■■□□□ 1.02
TTC3-209ENST00000438055 PMFBP1Q8TBY8 1022 aa21.42■■□□□ 1.02
TTC3-209ENST00000438055 RLBP1P12271 317 aa21.41■■□□□ 1.02
TTC3-209ENST00000438055 INO80Q9ULG1 1556 aaPredicted RBP21.41■■□□□ 1.02
TTC3-209ENST00000438055 EFCAB6Q5THR3 1501 aa21.41■■□□□ 1.02
TTC3-209ENST00000438055 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.4■■□□□ 1.027e-7■■■■■ 27.2
TTC3-209ENST00000438055 PRAM1Q96QH2 718 aa21.4■■□□□ 1.02
TTC3-209ENST00000438055 WDR63Q8IWG1 891 aa21.4■■□□□ 1.02
TTC3-209ENST00000438055 SLKQ9H2G2 1235 aaPredicted RBP21.4■■□□□ 1.02
TTC3-209ENST00000438055 MLECQ14165 292 aa21.4■■□□□ 1.02
TTC3-209ENST00000438055 TERF2IPQ9NYB0 399 aa21.4■■□□□ 1.02
TTC3-209ENST00000438055 ITPRIPQ8IWB1 547 aa21.39■■□□□ 1.01
TTC3-209ENST00000438055 RWDD1Q9H446 243 aaPredicted RBP21.39■■□□□ 1.01
TTC3-209ENST00000438055 SBNO2Q9Y2G9 1366 aa21.38■■□□□ 1.01
TTC3-209ENST00000438055 KIF1BO60333 1816 aa21.38■■□□□ 1.01
TTC3-209ENST00000438055 EXOSC9Q06265 439 aaKnown RBP21.37■■□□□ 1.01
TTC3-209ENST00000438055 ZKSCAN2Q63HK3 967 aa21.37■■□□□ 1.01
TTC3-209ENST00000438055 PCDHB15Q9Y5E8 787 aa21.37■■□□□ 1.01
TTC3-209ENST00000438055 HDGFL2Q7Z4V5 671 aaPredicted RBP21.36■■□□□ 1.01
TTC3-209ENST00000438055 BECN1Q14457 450 aa21.36■■□□□ 1.01
TTC3-209ENST00000438055 DEPDC5O75140 1603 aa21.36■■□□□ 1.01
TTC3-209ENST00000438055 PDZRN3Q9UPQ7 1066 aa21.36■■□□□ 1.01
TTC3-209ENST00000438055 ABCA9Q8IUA7 1624 aa21.35■■□□□ 1.01
TTC3-209ENST00000438055 DZIP1LQ8IYY4 767 aaKnown RBP21.35■■□□□ 1.01
TTC3-209ENST00000438055 VWDEQ8N2E2 1590 aa21.34■■□□□ 1.01
TTC3-209ENST00000438055 RIPK4P57078 832 aa21.34■■□□□ 1.01
TTC3-209ENST00000438055 FBXO31Q5XUX0 539 aaPredicted RBP21.34■■□□□ 1.01
TTC3-209ENST00000438055 SPRYD3Q8NCJ5 442 aa21.34■■□□□ 1.01
TTC3-209ENST00000438055 SEC24BO95487 1268 aa21.34■■□□□ 1.01
TTC3-209ENST00000438055 PPRC1Q5VV67 1664 aaKnown RBP21.34■■□□□ 1.01
TTC3-209ENST00000438055 POGZQ7Z3K3 1410 aa21.33■■□□□ 1.01
TTC3-209ENST00000438055 MYOM1P52179 1685 aa21.33■■□□□ 1.01
TTC3-209ENST00000438055 FRAT2O75474 233 aaPredicted RBP21.33■■□□□ 1
TTC3-209ENST00000438055 CYB5RLQ6IPT4 315 aa21.33■■□□□ 1
TTC3-209ENST00000438055 ANKRD36BQ8N2N9 1353 aa21.32■■□□□ 1
TTC3-209ENST00000438055 FBLN1P23142 703 aa21.32■■□□□ 1
TTC3-209ENST00000438055 CABP1Q9NZU7 370 aa21.31■■□□□ 1
TTC3-209ENST00000438055 NINLQ9Y2I6 1382 aa21.31■■□□□ 1
TTC3-209ENST00000438055 DIAPH1O60610 1272 aaKnown RBP21.31■■□□□ 1
TTC3-209ENST00000438055 SLC52A1Q9NWF4 448 aa21.31■■□□□ 1
TTC3-209ENST00000438055 MROH1Q8NDA8 1641 aa21.3■■□□□ 1
TTC3-209ENST00000438055 TMPOP42166 694 aaKnown RBP21.3■■□□□ 1
TTC3-209ENST00000438055 GSE1Q14687 1217 aa21.3■■□□□ 1
TTC3-209ENST00000438055 IL27Q8NEV9 243 aa21.3■■□□□ 1
TTC3-209ENST00000438055 KIDINS220Q9ULH0 1771 aa21.29■■□□□ 1
TTC3-209ENST00000438055 MVPQ14764 893 aaKnown RBP21.28■■□□□ 1
TTC3-209ENST00000438055 ARXQ96QS3 562 aa21.28■■□□□ 1
TTC3-209ENST00000438055 CDK19Q9BWU1 502 aa21.28■■□□□ 1
TTC3-209ENST00000438055 A0A1W2PP64 1363 aa21.28■■□□□ 1
TTC3-209ENST00000438055 ELL2O00472 640 aaPredicted RBP21.27■■□□□ 1
TTC3-209ENST00000438055 MROH2AA6NES4 1674 aa21.27■■□□□ 1
TTC3-209ENST00000438055 FYB1O15117 783 aa21.27■■□□□ 1
TTC3-209ENST00000438055 SSH1Q8WYL5 1049 aa21.27■■□□□ 1
TTC3-209ENST00000438055 HMOX1P09601 288 aa21.27■□□□□ 0.99
TTC3-209ENST00000438055 MFAP1P55081 439 aaKnown RBP21.27■□□□□ 0.99
TTC3-209ENST00000438055 ADGRB3O60242 1522 aa21.26■□□□□ 0.99
TTC3-209ENST00000438055 KIAA1210Q9ULL0 1709 aa21.26■□□□□ 0.99
TTC3-209ENST00000438055 CCDC27Q2M243 656 aa21.25■□□□□ 0.99
TTC3-209ENST00000438055 NOB1Q9ULX3 412 aaKnown RBP21.25■□□□□ 0.99
TTC3-209ENST00000438055 WAPLQ7Z5K2 1190 aa21.24■□□□□ 0.99
TTC3-209ENST00000438055 ESF1Q9H501 851 aaKnown RBP21.24■□□□□ 0.99
TTC3-209ENST00000438055 NRXN1Q9ULB1 1477 aa21.23■□□□□ 0.99
TTC3-209ENST00000438055 TRIM27P14373 513 aa21.23■□□□□ 0.99
TTC3-209ENST00000438055 MLH3Q9UHC1 1453 aa21.23■□□□□ 0.99
TTC3-209ENST00000438055 PNNQ9H307 717 aaKnown RBP21.23■□□□□ 0.99
TTC3-209ENST00000438055 PRKAR2BP31323 418 aa21.22■□□□□ 0.99
TTC3-209ENST00000438055 NSD2O96028 1365 aa21.22■□□□□ 0.99
TTC3-209ENST00000438055 DDX19BQ9UMR2 479 aa21.22■□□□□ 0.99
TTC3-209ENST00000438055 ATAD2Q6PL18 1390 aa21.21■□□□□ 0.99
TTC3-209ENST00000438055 IPO8O15397 1037 aaKnown RBP21.21■□□□□ 0.99
TTC3-209ENST00000438055 AAMPQ13685 434 aa21.21■□□□□ 0.99
TTC3-209ENST00000438055 ATF7IPQ6VMQ6 1270 aa21.21■□□□□ 0.99
TTC3-209ENST00000438055 THUMPD2Q9BTF0 503 aaKnown RBP21.21■□□□□ 0.99
TTC3-209ENST00000438055 ABCC3O15438 1527 aa21.21■□□□□ 0.99
TTC3-209ENST00000438055 LMTK2Q8IWU2 1503 aa21.2■□□□□ 0.98
TTC3-209ENST00000438055 FAM69CQ0P6D2 419 aa21.2■□□□□ 0.98
TTC3-209ENST00000438055 PHF23Q9BUL5 403 aaPredicted RBP21.2■□□□□ 0.98
TTC3-209ENST00000438055 TMEM57Q8N5G2 664 aa21.19■□□□□ 0.98
TTC3-209ENST00000438055 BRPF3Q9ULD4 1205 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms