RNA–Protein interactions for RNA: ENST00000436754.5

PDLIM2-211, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-211ENST00000436754 RBM6P78332 1123 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-211ENST00000436754 C8orf37Q96NL8 207 aa16.22■□□□□ 0.19
PDLIM2-211ENST00000436754 ABCC11Q96J66 1382 aa16.21■□□□□ 0.19
PDLIM2-211ENST00000436754 TECPR2O15040 1411 aa16.2■□□□□ 0.18
PDLIM2-211ENST00000436754 SIRT1Q96EB6 747 aa16.2■□□□□ 0.18
PDLIM2-211ENST00000436754 NGLY1Q96IV0 654 aa16.2■□□□□ 0.18
PDLIM2-211ENST00000436754 LRPPRCP42704 1394 aaKnown RBP16.19■□□□□ 0.18
PDLIM2-211ENST00000436754 RGL3Q3MIN7 710 aa16.19■□□□□ 0.18
PDLIM2-211ENST00000436754 CDC42BPGQ6DT37 1551 aa16.18■□□□□ 0.18
PDLIM2-211ENST00000436754 ESCO1Q5FWF5 840 aa16.18■□□□□ 0.18
PDLIM2-211ENST00000436754 FNBP4Q8N3X1 1017 aaPredicted RBP16.18■□□□□ 0.18
PDLIM2-211ENST00000436754 NPHP3Q7Z494 1330 aa16.18■□□□□ 0.18
PDLIM2-211ENST00000436754 ADAMTS2O95450 1211 aa16.17■□□□□ 0.18
PDLIM2-211ENST00000436754 WAPLQ7Z5K2 1190 aa16.17■□□□□ 0.18
PDLIM2-211ENST00000436754 PIK3C2GO75747 1445 aa16.16■□□□□ 0.18
PDLIM2-211ENST00000436754 IFT172Q9UG01 1749 aa16.16■□□□□ 0.18
PDLIM2-211ENST00000436754 COL22A1Q8NFW1 1626 aaPredicted RBP16.16■□□□□ 0.18
PDLIM2-211ENST00000436754 C14orf93Q9H972 538 aaKnown RBP16.15■□□□□ 0.18
PDLIM2-211ENST00000436754 STK26Q9P289 416 aa16.15■□□□□ 0.18
PDLIM2-211ENST00000436754 FOXO3O43524 673 aa16.14■□□□□ 0.17
PDLIM2-211ENST00000436754 HRCP23327 699 aa16.14■□□□□ 0.17
PDLIM2-211ENST00000436754 TMEM132EQ6IEE7 984 aa16.14■□□□□ 0.17
PDLIM2-211ENST00000436754 USP21Q9UK80 565 aa16.14■□□□□ 0.17
PDLIM2-211ENST00000436754 TRPC5Q9UL62 973 aaPredicted RBP16.14■□□□□ 0.17
PDLIM2-211ENST00000436754 PXDNQ92626 1479 aa16.14■□□□□ 0.17
PDLIM2-211ENST00000436754 RGS12O14924 1447 aa16.13■□□□□ 0.17
PDLIM2-211ENST00000436754 YTHDC2Q9H6S0 1430 aaKnown RBP16.12■□□□□ 0.17
PDLIM2-211ENST00000436754 MYOM2P54296 1465 aa16.12■□□□□ 0.17
PDLIM2-211ENST00000436754 KNDC1Q76NI1 1749 aa16.12■□□□□ 0.17
PDLIM2-211ENST00000436754 PLEKHH1Q9ULM0 1364 aa16.11■□□□□ 0.17
PDLIM2-211ENST00000436754 NRXN1Q9ULB1 1477 aa16.1■□□□□ 0.17
PDLIM2-211ENST00000436754 DHX57Q6P158 1386 aaKnown RBP16.09■□□□□ 0.17
PDLIM2-211ENST00000436754 ATRNO75882 1429 aa16.09■□□□□ 0.17
PDLIM2-211ENST00000436754 BCL9LQ86UU0 1499 aa16.08■□□□□ 0.16
PDLIM2-211ENST00000436754 NUTM2FA1L443 756 aa16.07■□□□□ 0.16
PDLIM2-211ENST00000436754 XPCQ01831 940 aaPredicted RBP16.07■□□□□ 0.16
PDLIM2-211ENST00000436754 CFAP70Q5T0N1 1121 aa16.07■□□□□ 0.16
PDLIM2-211ENST00000436754 SPATA31A3Q5VYP0 1347 aa16.07■□□□□ 0.16
PDLIM2-211ENST00000436754 FMN2Q9NZ56 1722 aa16.07■□□□□ 0.16
PDLIM2-211ENST00000436754 ATAD2Q6PL18 1390 aa16.06■□□□□ 0.16
PDLIM2-211ENST00000436754 KRT28Q7Z3Y7 464 aa16.06■□□□□ 0.16
PDLIM2-211ENST00000436754 MARF1Q9Y4F3 1742 aaKnown RBP16.05■□□□□ 0.16
PDLIM2-211ENST00000436754 KIF1AQ12756 1690 aa16.05■□□□□ 0.16
PDLIM2-211ENST00000436754 PSME1Q06323 249 aa16.04■□□□□ 0.16
PDLIM2-211ENST00000436754 GJD4Q96KN9 370 aaPredicted RBP16.04■□□□□ 0.16
PDLIM2-211ENST00000436754 STAC3Q96MF2 364 aa16.04■□□□□ 0.16
PDLIM2-211ENST00000436754 CCDC125Q86Z20 511 aa16.03■□□□□ 0.16
PDLIM2-211ENST00000436754 PHF8Q9UPP1 1060 aa16.03■□□□□ 0.16
PDLIM2-211ENST00000436754 UNC5CLQ8IV45 518 aa16.02■□□□□ 0.16
PDLIM2-211ENST00000436754 PRAM1Q96QH2 718 aa16.02■□□□□ 0.16
PDLIM2-211ENST00000436754 SLIT2O94813 1529 aa16.01■□□□□ 0.15
PDLIM2-211ENST00000436754 DLC1Q96QB1 1528 aa16.01■□□□□ 0.15
PDLIM2-211ENST00000436754 SBNO1A3KN83 1393 aa16■□□□□ 0.15
PDLIM2-211ENST00000436754 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.99■□□□□ 0.15
PDLIM2-211ENST00000436754 POGKQ9P215 609 aa15.99■□□□□ 0.15
PDLIM2-211ENST00000436754 ANKARQ7Z5J8 1434 aa15.99■□□□□ 0.15
PDLIM2-211ENST00000436754 RGPD8O14715 1765 aaPredicted RBP15.98■□□□□ 0.15
PDLIM2-211ENST00000436754 KDM2AQ9Y2K7 1162 aa15.98■□□□□ 0.15
PDLIM2-211ENST00000436754 TNS3Q68CZ2 1445 aa15.97■□□□□ 0.15
PDLIM2-211ENST00000436754 DCAF11Q8TEB1 546 aa15.97■□□□□ 0.15
PDLIM2-211ENST00000436754 ARHGEF10O15013 1369 aa15.97■□□□□ 0.15
PDLIM2-211ENST00000436754 ADGRB1O14514 1584 aa15.96■□□□□ 0.15
PDLIM2-211ENST00000436754 ONECUT3O60422 494 aaPredicted RBP15.96■□□□□ 0.15
PDLIM2-211ENST00000436754 SAFB2Q14151 953 aaKnown RBP eCLIP15.96■□□□□ 0.15
PDLIM2-211ENST00000436754 USP32Q8NFA0 1604 aa15.95■□□□□ 0.14
PDLIM2-211ENST00000436754 VPS72Q15906 364 aa15.95■□□□□ 0.14
PDLIM2-211ENST00000436754 RALGAPBQ86X10 1494 aa15.95■□□□□ 0.14
PDLIM2-211ENST00000436754 ADGRB2O60241 1585 aa15.95■□□□□ 0.14
PDLIM2-211ENST00000436754 CABLES1Q8TDN4 633 aa15.94■□□□□ 0.14
PDLIM2-211ENST00000436754 TRAK1Q9UPV9 953 aa15.94■□□□□ 0.14
PDLIM2-211ENST00000436754 EIF3AQ14152 1382 aaKnown RBP15.93■□□□□ 0.14
PDLIM2-211ENST00000436754 HAP1P54257 671 aaPredicted RBP15.93■□□□□ 0.14
PDLIM2-211ENST00000436754 TRIM26Q12899 539 aaPredicted RBP15.93■□□□□ 0.14
PDLIM2-211ENST00000436754 PMFBP1Q8TBY8 1022 aa15.93■□□□□ 0.14
PDLIM2-211ENST00000436754 GLI3P10071 1580 aa15.92■□□□□ 0.14
PDLIM2-211ENST00000436754 FAM83GA6ND36 823 aa15.92■□□□□ 0.14
PDLIM2-211ENST00000436754 WASLO00401 505 aaPredicted RBP15.92■□□□□ 0.14
PDLIM2-211ENST00000436754 ZRANB1Q9UGI0 708 aa15.91■□□□□ 0.14
PDLIM2-211ENST00000436754 NWD2Q9ULI1 1742 aa15.91■□□□□ 0.14
PDLIM2-211ENST00000436754 GPRASP1Q5JY77 1395 aa15.9■□□□□ 0.14
PDLIM2-211ENST00000436754 LMOD2Q6P5Q4 547 aa15.9■□□□□ 0.14
PDLIM2-211ENST00000436754 SEPT12Q8IYM1 358 aa15.89■□□□□ 0.13
PDLIM2-211ENST00000436754 HIRIP3Q9BW71 556 aaPredicted RBP15.89■□□□□ 0.13
PDLIM2-211ENST00000436754 MINK1Q8N4C8 1332 aaPredicted RBP15.89■□□□□ 0.13
PDLIM2-211ENST00000436754 PRR36Q9H6K5 1346 aa15.89■□□□□ 0.13
PDLIM2-211ENST00000436754 BLMP54132 1417 aaPredicted RBP15.88■□□□□ 0.13
PDLIM2-211ENST00000436754 TULP4Q9NRJ4 1543 aa15.88■□□□□ 0.13
PDLIM2-211ENST00000436754 ABCA3Q99758 1704 aa15.87■□□□□ 0.13
PDLIM2-211ENST00000436754 TRPM3Q9HCF6 1732 aaPredicted RBP15.87■□□□□ 0.13
PDLIM2-211ENST00000436754 SIN3AQ96ST3 1273 aa15.86■□□□□ 0.13
PDLIM2-211ENST00000436754 PLCH1Q4KWH8 1693 aa15.86■□□□□ 0.13
PDLIM2-211ENST00000436754 NEUROD1Q13562 356 aa15.85■□□□□ 0.13
PDLIM2-211ENST00000436754 NGDNQ8NEJ9 315 aaKnown RBP15.85■□□□□ 0.13
PDLIM2-211ENST00000436754 ALS2Q96Q42 1657 aa15.85■□□□□ 0.13
PDLIM2-211ENST00000436754 KIAA1210Q9ULL0 1709 aa15.85■□□□□ 0.13
PDLIM2-211ENST00000436754 BRWD3Q6RI45 1802 aa15.84■□□□□ 0.13
PDLIM2-211ENST00000436754 KRT27Q7Z3Y8 459 aa15.84■□□□□ 0.13
PDLIM2-211ENST00000436754 NUDT16Q96DE0 195 aaKnown RBP15.84■□□□□ 0.13
PDLIM2-211ENST00000436754 BTG4Q9NY30 223 aa15.84■□□□□ 0.13
PDLIM2-211ENST00000436754 CCDC9Q9Y3X0 531 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms