RNA–Protein interactions for RNA: ENST00000436722.1

LINC00411-201, long intergenic non-protein coding RNA 411, humanhuman

TSL 3 BASIC

Gene LINC00411, Length 461 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00411-201ENST00000436722 GCGRP47871 477 aa10.43□□□□□ -0.74
LINC00411-201ENST00000436722 MSS51Q4VC12 460 aa10.43□□□□□ -0.74
LINC00411-201ENST00000436722 MRGPRX2Q96LB1 330 aa10.43□□□□□ -0.74
LINC00411-201ENST00000436722 TRIM32Q13049 653 aa10.42□□□□□ -0.74
LINC00411-201ENST00000436722 RNF19BQ6ZMZ0 732 aa10.41□□□□□ -0.74
LINC00411-201ENST00000436722 HPS1Q92902 700 aa10.41□□□□□ -0.74
LINC00411-201ENST00000436722 KIFC2Q96AC6 838 aa10.41□□□□□ -0.74
LINC00411-201ENST00000436722 SEMA3EO15041 775 aa10.4□□□□□ -0.74
LINC00411-201ENST00000436722 NLRP7Q8WX94 980 aa10.4□□□□□ -0.74
LINC00411-201ENST00000436722 FAM181BA6NEQ2 426 aa10.38□□□□□ -0.75
LINC00411-201ENST00000436722 SULF1Q8IWU6 871 aa10.38□□□□□ -0.75
LINC00411-201ENST00000436722 TSHZ2Q9NRE2 1034 aa10.38□□□□□ -0.75
LINC00411-201ENST00000436722 SLC16A10Q8TF71 515 aa10.37□□□□□ -0.75
LINC00411-201ENST00000436722 GRIPAP1Q4V328 841 aa10.36□□□□□ -0.75
LINC00411-201ENST00000436722 REPIN1Q9BWE0 567 aaKnown RBP10.36□□□□□ -0.75
LINC00411-201ENST00000436722 GNPATO15228 680 aa10.35□□□□□ -0.75
LINC00411-201ENST00000436722 MMP16P51512 607 aa10.35□□□□□ -0.75
LINC00411-201ENST00000436722 Q3C1V9 767 aa10.33□□□□□ -0.76
LINC00411-201ENST00000436722 RBM26Q5T8P6 1007 aaKnown RBP10.33□□□□□ -0.76
LINC00411-201ENST00000436722 RC3H1Q5TC82 1133 aaKnown RBP10.33□□□□□ -0.76
LINC00411-201ENST00000436722 NXF1Q9UBU9 619 aaKnown RBP10.33□□□□□ -0.76
LINC00411-201ENST00000436722 GMPRP36959 345 aa10.31□□□□□ -0.76
LINC00411-201ENST00000436722 PHOX2BQ99453 314 aa10.31□□□□□ -0.76
LINC00411-201ENST00000436722 P3H3Q8IVL6 736 aa10.3□□□□□ -0.76
LINC00411-201ENST00000436722 CCDC24Q8N4L8 307 aa10.3□□□□□ -0.76
LINC00411-201ENST00000436722 ZSCAN1Q8NBB4 408 aa10.3□□□□□ -0.76
LINC00411-201ENST00000436722 DXOO77932 396 aaKnown RBP10.29□□□□□ -0.76
LINC00411-201ENST00000436722 SKOR1P84550 965 aa10.29□□□□□ -0.76
LINC00411-201ENST00000436722 USB1Q9BQ65 265 aaKnown RBP10.29□□□□□ -0.76
LINC00411-201ENST00000436722 LOC100996750A0A140TA64 210 aa10.28□□□□□ -0.76
LINC00411-201ENST00000436722 ALDH1A1P00352 501 aa10.28□□□□□ -0.76
LINC00411-201ENST00000436722 LORP23490 312 aaPredicted RBP10.28□□□□□ -0.76
LINC00411-201ENST00000436722 KRTAP4-6Q9BYQ5 205 aa10.28□□□□□ -0.76
LINC00411-201ENST00000436722 WNT7BP56706 349 aa10.27□□□□□ -0.77
LINC00411-201ENST00000436722 IRF7Q92985 503 aa10.27□□□□□ -0.77
LINC00411-201ENST00000436722 GPR37O15354 613 aa10.26□□□□□ -0.77
LINC00411-201ENST00000436722 NPAS3Q8IXF0 933 aa10.25□□□□□ -0.77
LINC00411-201ENST00000436722 VEGFBP49765 207 aa10.24□□□□□ -0.77
LINC00411-201ENST00000436722 SMYD5Q6GMV2 418 aa10.24□□□□□ -0.77
LINC00411-201ENST00000436722 TESPA1A2RU30 521 aaPredicted RBP10.23□□□□□ -0.77
LINC00411-201ENST00000436722 BMP1P13497 986 aa10.23□□□□□ -0.77
LINC00411-201ENST00000436722 TRIM46Q7Z4K8 759 aa10.23□□□□□ -0.77
LINC00411-201ENST00000436722 H3BM21 787 aa10.21□□□□□ -0.77
LINC00411-201ENST00000436722 CAPN5O15484 640 aaPredicted RBP10.21□□□□□ -0.77
LINC00411-201ENST00000436722 AMER1Q5JTC6 1135 aaPredicted RBP10.21□□□□□ -0.77
LINC00411-201ENST00000436722 KDM4AO75164 1064 aa10.2□□□□□ -0.78
LINC00411-201ENST00000436722 CD46P15529 392 aa10.2□□□□□ -0.78
LINC00411-201ENST00000436722 ERBB4Q15303 1308 aa10.19□□□□□ -0.78
LINC00411-201ENST00000436722 SIAH2O43255 324 aa10.19□□□□□ -0.78
LINC00411-201ENST00000436722 WASF2Q9Y6W5 498 aa10.19□□□□□ -0.78
LINC00411-201ENST00000436722 EHBP1Q8NDI1 1231 aa10.18□□□□□ -0.78
LINC00411-201ENST00000436722 HLA-CQ95604 372 aa10.18□□□□□ -0.78
LINC00411-201ENST00000436722 JUNDP17535 347 aa10.14□□□□□ -0.79
LINC00411-201ENST00000436722 USP46P62068 366 aa10.14□□□□□ -0.79
LINC00411-201ENST00000436722 ZFP42Q96MM3 310 aa10.14□□□□□ -0.79
LINC00411-201ENST00000436722 RTN4Q9NQC3 1192 aaKnown RBP10.14□□□□□ -0.79
LINC00411-201ENST00000436722 PTCRAQ6ISU1 281 aaPredicted RBP10.13□□□□□ -0.79
LINC00411-201ENST00000436722 SUZ12Q15022 739 aaKnown RBP10.12□□□□□ -0.79
LINC00411-201ENST00000436722 HOXA2O43364 376 aa10.11□□□□□ -0.79
LINC00411-201ENST00000436722 SYMPKQ92797 1274 aaKnown RBP10.11□□□□□ -0.79
LINC00411-201ENST00000436722 NUDT12Q9BQG2 462 aa10.11□□□□□ -0.79
LINC00411-201ENST00000436722 GUCA2AQ02747 115 aa10.1□□□□□ -0.79
LINC00411-201ENST00000436722 GPIHBP1Q8IV16 184 aa10.09□□□□□ -0.79
LINC00411-201ENST00000436722 SH3BP2P78314 561 aa10.08□□□□□ -0.8
LINC00411-201ENST00000436722 MDM2Q00987 491 aaPredicted RBP10.06□□□□□ -0.8
LINC00411-201ENST00000436722 RETREG3Q86VR2 466 aa10.05□□□□□ -0.8
LINC00411-201ENST00000436722 SCARF1Q14162 830 aa10.04□□□□□ -0.8
LINC00411-201ENST00000436722 MRPL14Q6P1L8 145 aaKnown RBP10.04□□□□□ -0.8
LINC00411-201ENST00000436722 SOBPA7XYQ1 873 aa10.03□□□□□ -0.8
LINC00411-201ENST00000436722 PURBQ96QR8 312 aaKnown RBP10.03□□□□□ -0.8
LINC00411-201ENST00000436722 TLL2Q9Y6L7 1015 aa10.03□□□□□ -0.8
LINC00411-201ENST00000436722 VSIG8P0DPA2 414 aa10.02□□□□□ -0.81
LINC00411-201ENST00000436722 KCNMA1Q12791 1236 aa10.02□□□□□ -0.81
LINC00411-201ENST00000436722 PLEKHG3A1L390 1219 aa10.01□□□□□ -0.81
LINC00411-201ENST00000436722 CCNYL3P0C7X3 344 aa10.01□□□□□ -0.81
LINC00411-201ENST00000436722 MS4A1P11836 297 aa10.01□□□□□ -0.81
LINC00411-201ENST00000436722 MAP2K5Q13163 448 aa10.01□□□□□ -0.81
LINC00411-201ENST00000436722 NNTQ13423 1086 aa10.01□□□□□ -0.81
LINC00411-201ENST00000436722 LINC01559Q495D7 138 aa10.01□□□□□ -0.81
LINC00411-201ENST00000436722 KCTD17Q8N5Z5 321 aa10.01□□□□□ -0.81
LINC00411-201ENST00000436722 NUTM1Q86Y26 1132 aa10□□□□□ -0.81
LINC00411-201ENST00000436722 BAP1Q92560 729 aa10□□□□□ -0.81
LINC00411-201ENST00000436722 UNC93B1Q9H1C4 597 aa10□□□□□ -0.81
LINC00411-201ENST00000436722 IRF6O14896 467 aa9.99□□□□□ -0.81
LINC00411-201ENST00000436722 C6orf229H3BNL8 230 aa9.98□□□□□ -0.81
LINC00411-201ENST00000436722 TIMP2P16035 220 aa9.98□□□□□ -0.81
LINC00411-201ENST00000436722 VARSP26640 1264 aaKnown RBP9.98□□□□□ -0.81
LINC00411-201ENST00000436722 WDR4P57081 412 aaKnown RBP9.98□□□□□ -0.81
LINC00411-201ENST00000436722 EVA1BQ9NVM1 165 aa9.98□□□□□ -0.81
LINC00411-201ENST00000436722 GSK3AP49840 483 aa9.97□□□□□ -0.81
LINC00411-201ENST00000436722 MPNDQ8N594 471 aa9.97□□□□□ -0.81
LINC00411-201ENST00000436722 ADH1CP00326 375 aa9.96□□□□□ -0.82
LINC00411-201ENST00000436722 FDX1P10109 184 aa9.96□□□□□ -0.82
LINC00411-201ENST00000436722 PTPRNQ16849 979 aa9.96□□□□□ -0.82
LINC00411-201ENST00000436722 PCDHGC3Q9UN70 934 aa9.96□□□□□ -0.82
LINC00411-201ENST00000436722 ZNF511Q8NB15 262 aa9.95□□□□□ -0.82
LINC00411-201ENST00000436722 KCNH2Q12809 1159 aa9.94□□□□□ -0.82
LINC00411-201ENST00000436722 TMEM151AQ8N4L1 468 aa9.94□□□□□ -0.82
LINC00411-201ENST00000436722 KLF16Q9BXK1 252 aaPredicted RBP9.94□□□□□ -0.82
LINC00411-201ENST00000436722 FAM217BQ9NTX9 383 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms