RNA–Protein interactions for RNA: ENST00000436679.2

C2CD3-206, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 1,134 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-206ENST00000436679 KNDC1Q76NI1 1749 aa22.64■■□□□ 1.21
C2CD3-206ENST00000436679 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.64■■□□□ 1.21
C2CD3-206ENST00000436679 SIRT1Q96EB6 747 aa22.62■■□□□ 1.21
C2CD3-206ENST00000436679 BRINP3Q76B58 766 aa22.61■■□□□ 1.21
C2CD3-206ENST00000436679 STK26Q9P289 416 aa22.61■■□□□ 1.21
C2CD3-206ENST00000436679 DLC1Q96QB1 1528 aa22.61■■□□□ 1.21
C2CD3-206ENST00000436679 COL16A1Q07092 1604 aaPredicted RBP22.6■■□□□ 1.21
C2CD3-206ENST00000436679 SPATA31A6Q5VVP1 1343 aa22.6■■□□□ 1.21
C2CD3-206ENST00000436679 MEX3CQ5U5Q3 659 aaKnown RBP22.59■■□□□ 1.21
C2CD3-206ENST00000436679 ADGRL3Q9HAR2 1447 aa22.58■■□□□ 1.21
C2CD3-206ENST00000436679 NBPF8Q3BBV2 869 aa22.58■■□□□ 1.21
C2CD3-206ENST00000436679 DCCP43146 1447 aa22.57■■□□□ 1.2
C2CD3-206ENST00000436679 TRPM1Q7Z4N2 1603 aa22.57■■□□□ 1.2
C2CD3-206ENST00000436679 NBPF1Q3BBV0 1214 aa22.57■■□□□ 1.2
C2CD3-206ENST00000436679 LRP6O75581 1613 aa22.56■■□□□ 1.2
C2CD3-206ENST00000436679 NUTM2BA6NNL0 878 aaPredicted RBP22.55■■□□□ 1.2
C2CD3-206ENST00000436679 NUTM2EB1AL46 878 aaPredicted RBP22.55■■□□□ 1.2
C2CD3-206ENST00000436679 NUTM2AQ8IVF1 878 aaPredicted RBP22.55■■□□□ 1.2
C2CD3-206ENST00000436679 ZNF772Q68DY9 489 aaPredicted RBP22.54■■□□□ 1.2
C2CD3-206ENST00000436679 RALGAPBQ86X10 1494 aa22.54■■□□□ 1.2
C2CD3-206ENST00000436679 AHDC1Q5TGY3 1603 aaPredicted RBP22.53■■□□□ 1.2
C2CD3-206ENST00000436679 GPRASP1Q5JY77 1395 aa22.53■■□□□ 1.2
C2CD3-206ENST00000436679 PLEKHH1Q9ULM0 1364 aa22.53■■□□□ 1.2
C2CD3-206ENST00000436679 WAPLQ7Z5K2 1190 aa22.53■■□□□ 1.2
C2CD3-206ENST00000436679 DDX17Q92841 729 aaKnown RBP22.53■■□□□ 1.2
C2CD3-206ENST00000436679 TRAK1Q9UPV9 953 aa22.53■■□□□ 1.2
C2CD3-206ENST00000436679 ROCK2O75116 1388 aaKnown RBP22.52■■□□□ 1.2
C2CD3-206ENST00000436679 NALCNQ8IZF0 1738 aa22.52■■□□□ 1.2
C2CD3-206ENST00000436679 MST1RQ04912 1400 aa22.51■■□□□ 1.19
C2CD3-206ENST00000436679 PRAM1Q96QH2 718 aa22.51■■□□□ 1.19
C2CD3-206ENST00000436679 CDC42BPGQ6DT37 1551 aa22.48■■□□□ 1.19
C2CD3-206ENST00000436679 ARHGEF28Q8N1W1 1705 aaKnown RBP22.48■■□□□ 1.19
C2CD3-206ENST00000436679 POGKQ9P215 609 aa22.47■■□□□ 1.19
C2CD3-206ENST00000436679 ADGRB2O60241 1585 aa22.44■■□□□ 1.18
C2CD3-206ENST00000436679 SHPRHQ149N8 1683 aa22.44■■□□□ 1.18
C2CD3-206ENST00000436679 LRRC59Q96AG4 307 aaKnown RBP22.44■■□□□ 1.18
C2CD3-206ENST00000436679 RXRBP28702 533 aa22.42■■□□□ 1.18
C2CD3-206ENST00000436679 UPF1Q92900 1129 aaKnown RBP eCLIP22.42■■□□□ 1.18
C2CD3-206ENST00000436679 CARD11Q9BXL7 1154 aa22.42■■□□□ 1.18
C2CD3-206ENST00000436679 SAFB2Q14151 953 aaKnown RBP eCLIP22.41■■□□□ 1.18
C2CD3-206ENST00000436679 EIF3AQ14152 1382 aaKnown RBP22.4■■□□□ 1.18
C2CD3-206ENST00000436679 AFF2P51816 1311 aa22.4■■□□□ 1.18
C2CD3-206ENST00000436679 ORAI2Q96SN7 254 aa22.4■■□□□ 1.18
C2CD3-206ENST00000436679 CENPJQ9HC77 1338 aaPredicted RBP22.39■■□□□ 1.18
C2CD3-206ENST00000436679 C1orf167Q5SNV9 1468 aa22.39■■□□□ 1.17
C2CD3-206ENST00000436679 C8orf37Q96NL8 207 aa22.38■■□□□ 1.17
C2CD3-206ENST00000436679 NHSL1Q5SYE7 1610 aa22.38■■□□□ 1.17
C2CD3-206ENST00000436679 PNPLA6Q8IY17 1366 aa22.37■■□□□ 1.17
C2CD3-206ENST00000436679 MINK1Q8N4C8 1332 aaPredicted RBP22.36■■□□□ 1.17
C2CD3-206ENST00000436679 CDK12Q9NYV4 1490 aaPredicted RBP22.35■■□□□ 1.17
C2CD3-206ENST00000436679 FMN2Q9NZ56 1722 aa22.35■■□□□ 1.17
C2CD3-206ENST00000436679 ADAMTS2O95450 1211 aa22.35■■□□□ 1.17
C2CD3-206ENST00000436679 HIRIP3Q9BW71 556 aaPredicted RBP22.34■■□□□ 1.17
C2CD3-206ENST00000436679 WASLO00401 505 aaPredicted RBP22.33■■□□□ 1.17
C2CD3-206ENST00000436679 ANKARQ7Z5J8 1434 aa22.32■■□□□ 1.16
C2CD3-206ENST00000436679 SBNO2Q9Y2G9 1366 aa22.32■■□□□ 1.16
C2CD3-206ENST00000436679 QRICH2Q9H0J4 1663 aa22.32■■□□□ 1.16
C2CD3-206ENST00000436679 QTRT2Q9H974 415 aaKnown RBP22.31■■□□□ 1.16
C2CD3-206ENST00000436679 TULP4Q9NRJ4 1543 aa22.31■■□□□ 1.16
C2CD3-206ENST00000436679 NGLY1Q96IV0 654 aa22.3■■□□□ 1.16
C2CD3-206ENST00000436679 SOS2Q07890 1332 aaPredicted RBP22.3■■□□□ 1.16
C2CD3-206ENST00000436679 NUTM2FA1L443 756 aa22.29■■□□□ 1.16
C2CD3-206ENST00000436679 ESCO1Q5FWF5 840 aa22.29■■□□□ 1.16
C2CD3-206ENST00000436679 USP47Q96K76 1375 aa22.27■■□□□ 1.16
C2CD3-206ENST00000436679 RBM6P78332 1123 aaKnown RBP22.27■■□□□ 1.16
C2CD3-206ENST00000436679 USP32Q8NFA0 1604 aa22.27■■□□□ 1.16
C2CD3-206ENST00000436679 XPCQ01831 940 aaPredicted RBP22.26■■□□□ 1.15
C2CD3-206ENST00000436679 CDK19Q9BWU1 502 aa22.26■■□□□ 1.15
C2CD3-206ENST00000436679 PRR36Q9H6K5 1346 aa22.26■■□□□ 1.15
C2CD3-206ENST00000436679 ATP7BP35670 1465 aa22.24■■□□□ 1.15
C2CD3-206ENST00000436679 EVC2Q86UK5 1308 aa22.24■■□□□ 1.15
C2CD3-206ENST00000436679 ST20-MTHFSA0A0A6YYL1 179 aa22.23■■□□□ 1.15
C2CD3-206ENST00000436679 FOXO3O43524 673 aa22.23■■□□□ 1.15
C2CD3-206ENST00000436679 TESK2Q96S53 571 aa22.22■■□□□ 1.15
C2CD3-206ENST00000436679 KIF1AQ12756 1690 aa22.22■■□□□ 1.15
C2CD3-206ENST00000436679 SRCAPQ6ZRS2 3230 aa22.21■■□□□ 1.15
C2CD3-206ENST00000436679 SLC24A1O60721 1099 aa22.21■■□□□ 1.15
C2CD3-206ENST00000436679 NUDT16Q96DE0 195 aaKnown RBP22.21■■□□□ 1.15
C2CD3-206ENST00000436679 USP21Q9UK80 565 aa22.21■■□□□ 1.15
C2CD3-206ENST00000436679 RGS12O14924 1447 aa22.21■■□□□ 1.15
C2CD3-206ENST00000436679 PHF8Q9UPP1 1060 aa22.2■■□□□ 1.14
C2CD3-206ENST00000436679 NPHP3Q7Z494 1330 aa22.2■■□□□ 1.14
C2CD3-206ENST00000436679 SRPK2P78362 688 aaKnown RBP22.19■■□□□ 1.14
C2CD3-206ENST00000436679 CCDC61Q9Y6R9 512 aa22.18■■□□□ 1.14
C2CD3-206ENST00000436679 TOPAZ1Q8N9V7 1692 aa22.17■■□□□ 1.14
C2CD3-206ENST00000436679 FNBP4Q8N3X1 1017 aaPredicted RBP22.17■■□□□ 1.14
C2CD3-206ENST00000436679 CABP2Q9NPB3 220 aa22.17■■□□□ 1.14
C2CD3-206ENST00000436679 RGPD8O14715 1765 aaPredicted RBP22.16■■□□□ 1.14
C2CD3-206ENST00000436679 PXDNQ92626 1479 aa22.15■■□□□ 1.14
C2CD3-206ENST00000436679 ITSN1Q15811 1721 aa22.15■■□□□ 1.14
C2CD3-206ENST00000436679 EIF4G2P78344 907 aaKnown RBP eCLIP22.15■■□□□ 1.14
C2CD3-206ENST00000436679 PUS7Q96PZ0 661 aaKnown RBP22.15■■□□□ 1.14
C2CD3-206ENST00000436679 ATAD2Q6PL18 1390 aa22.14■■□□□ 1.14
C2CD3-206ENST00000436679 PLEKHG3A1L390 1219 aa22.14■■□□□ 1.13
C2CD3-206ENST00000436679 TRPC5Q9UL62 973 aaPredicted RBP22.14■■□□□ 1.13
C2CD3-206ENST00000436679 PMFBP1Q8TBY8 1022 aa22.13■■□□□ 1.13
C2CD3-206ENST00000436679 POLR3AO14802 1390 aaPredicted RBP22.12■■□□□ 1.13
C2CD3-206ENST00000436679 PPIP5K1Q6PFW1 1433 aa22.12■■□□□ 1.13
C2CD3-206ENST00000436679 PLEKHG5O94827 1062 aa22.1■■□□□ 1.13
C2CD3-206ENST00000436679 HSPA5P11021 654 aaKnown RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms