RNA–Protein interactions for RNA: ENST00000436564.5

COPS7B-212, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-212ENST00000436564 METP08581 1390 aa16.66■□□□□ 0.26
COPS7B-212ENST00000436564 UNC13BO14795 1591 aa16.66■□□□□ 0.26
COPS7B-212ENST00000436564 ATAD2Q6PL18 1390 aa16.65■□□□□ 0.26
COPS7B-212ENST00000436564 USP21Q9UK80 565 aa16.65■□□□□ 0.26
COPS7B-212ENST00000436564 ROCK1Q13464 1354 aa16.64■□□□□ 0.26
COPS7B-212ENST00000436564 E9PCH4 1651 aa16.64■□□□□ 0.25
COPS7B-212ENST00000436564 ADGRL3Q9HAR2 1447 aa16.63■□□□□ 0.25
COPS7B-212ENST00000436564 ZRANB1Q9UGI0 708 aa16.63■□□□□ 0.25
COPS7B-212ENST00000436564 TRPC5Q9UL62 973 aaPredicted RBP16.63■□□□□ 0.25
COPS7B-212ENST00000436564 RBM42Q9BTD8 480 aaKnown RBP16.62■□□□□ 0.25
COPS7B-212ENST00000436564 SETBP1Q9Y6X0 1596 aa16.62■□□□□ 0.25
COPS7B-212ENST00000436564 NHSL1Q5SYE7 1610 aa16.61■□□□□ 0.25
COPS7B-212ENST00000436564 ITGAEP38570 1179 aa16.61■□□□□ 0.25
COPS7B-212ENST00000436564 XRN1Q8IZH2 1706 aaKnown RBP16.61■□□□□ 0.25
COPS7B-212ENST00000436564 IQGAP3Q86VI3 1631 aa16.6■□□□□ 0.25
COPS7B-212ENST00000436564 C1orf167Q5SNV9 1468 aa16.6■□□□□ 0.25
COPS7B-212ENST00000436564 FNBP4Q8N3X1 1017 aaPredicted RBP16.59■□□□□ 0.25
COPS7B-212ENST00000436564 ORAI2Q96SN7 254 aa16.59■□□□□ 0.25
COPS7B-212ENST00000436564 SOS2Q07890 1332 aaPredicted RBP16.59■□□□□ 0.25
COPS7B-212ENST00000436564 NRXN3Q9Y4C0 1643 aa16.58■□□□□ 0.24
COPS7B-212ENST00000436564 CCDC125Q86Z20 511 aa16.56■□□□□ 0.24
COPS7B-212ENST00000436564 PTCH1Q13635 1447 aa16.55■□□□□ 0.24
COPS7B-212ENST00000436564 VGFO15240 615 aaPredicted RBP16.53■□□□□ 0.24
COPS7B-212ENST00000436564 ATRNO75882 1429 aa16.53■□□□□ 0.24
COPS7B-212ENST00000436564 ROBO2Q9HCK4 1378 aa16.52■□□□□ 0.24
COPS7B-212ENST00000436564 EP400Q96L91 3159 aa16.51■□□□□ 0.23
COPS7B-212ENST00000436564 ESCO1Q5FWF5 840 aa16.51■□□□□ 0.23
COPS7B-212ENST00000436564 NPHP3Q7Z494 1330 aa16.5■□□□□ 0.23
COPS7B-212ENST00000436564 GJD4Q96KN9 370 aaPredicted RBP16.5■□□□□ 0.23
COPS7B-212ENST00000436564 NALCNQ8IZF0 1738 aa16.5■□□□□ 0.23
COPS7B-212ENST00000436564 NEXMIFQ5QGS0 1516 aa16.5■□□□□ 0.23
COPS7B-212ENST00000436564 FOXO3O43524 673 aa16.47■□□□□ 0.23
COPS7B-212ENST00000436564 XPCQ01831 940 aaPredicted RBP16.47■□□□□ 0.23
COPS7B-212ENST00000436564 BCL9LQ86UU0 1499 aa16.47■□□□□ 0.23
COPS7B-212ENST00000436564 HFM1A2PYH4 1435 aa16.46■□□□□ 0.23
COPS7B-212ENST00000436564 LAMC1P11047 1609 aa16.46■□□□□ 0.23
COPS7B-212ENST00000436564 SPHKAPQ2M3C7 1700 aa16.46■□□□□ 0.23
COPS7B-212ENST00000436564 MYOM2P54296 1465 aa16.46■□□□□ 0.23
COPS7B-212ENST00000436564 MKRN4PQ13434 485 aaPredicted RBP16.45■□□□□ 0.22
COPS7B-212ENST00000436564 RPGRIP1LQ68CZ1 1315 aa16.45■□□□□ 0.22
COPS7B-212ENST00000436564 LRPPRCP42704 1394 aaKnown RBP16.44■□□□□ 0.22
COPS7B-212ENST00000436564 SF3B2Q13435 895 aaKnown RBP16.43■□□□□ 0.22
COPS7B-212ENST00000436564 UNC5CLQ8IV45 518 aa16.43■□□□□ 0.22
COPS7B-212ENST00000436564 CLTCL1P53675 1640 aa16.43■□□□□ 0.22
COPS7B-212ENST00000436564 NUTM2FA1L443 756 aa16.42■□□□□ 0.22
COPS7B-212ENST00000436564 PRAG1Q86YV5 1406 aa16.42■□□□□ 0.22
COPS7B-212ENST00000436564 COL22A1Q8NFW1 1626 aaPredicted RBP16.41■□□□□ 0.22
COPS7B-212ENST00000436564 SPDYE2BA6NHP3 402 aa16.41■□□□□ 0.22
COPS7B-212ENST00000436564 SPDYE6P0CI01 402 aa16.41■□□□□ 0.22
COPS7B-212ENST00000436564 SPDYE2Q495Y8 402 aa16.41■□□□□ 0.22
COPS7B-212ENST00000436564 PPARGC1BQ86YN6 1023 aaKnown RBP16.41■□□□□ 0.22
COPS7B-212ENST00000436564 BLMP54132 1417 aaPredicted RBP16.41■□□□□ 0.22
COPS7B-212ENST00000436564 DEFB132Q7Z7B7 95 aa16.4■□□□□ 0.22
COPS7B-212ENST00000436564 PXDNQ92626 1479 aa16.4■□□□□ 0.22
COPS7B-212ENST00000436564 STK26Q9P289 416 aa16.39■□□□□ 0.21
COPS7B-212ENST00000436564 HAP1P54257 671 aaPredicted RBP16.38■□□□□ 0.21
COPS7B-212ENST00000436564 WAPLQ7Z5K2 1190 aa16.38■□□□□ 0.21
COPS7B-212ENST00000436564 RALGAPBQ86X10 1494 aa16.37■□□□□ 0.21
COPS7B-212ENST00000436564 SEPT12Q8IYM1 358 aa16.37■□□□□ 0.21
COPS7B-212ENST00000436564 NAIPQ13075 1403 aa16.36■□□□□ 0.21
COPS7B-212ENST00000436564 SPATA31A3Q5VYP0 1347 aa16.36■□□□□ 0.21
COPS7B-212ENST00000436564 CDC42BPGQ6DT37 1551 aa16.35■□□□□ 0.21
COPS7B-212ENST00000436564 CCDC9Q9Y3X0 531 aaKnown RBP16.35■□□□□ 0.21
COPS7B-212ENST00000436564 SLIT2O94813 1529 aa16.35■□□□□ 0.21
COPS7B-212ENST00000436564 KRT28Q7Z3Y7 464 aa16.34■□□□□ 0.21
COPS7B-212ENST00000436564 KIF1BO60333 1816 aa16.33■□□□□ 0.21
COPS7B-212ENST00000436564 PLEKHG5O94827 1062 aa16.33■□□□□ 0.2
COPS7B-212ENST00000436564 VPS72Q15906 364 aa16.33■□□□□ 0.2
COPS7B-212ENST00000436564 ADGRF5Q8IZF2 1346 aa16.33■□□□□ 0.2
COPS7B-212ENST00000436564 CCDC144AA2RUR9 1427 aa16.32■□□□□ 0.2
COPS7B-212ENST00000436564 KRT27Q7Z3Y8 459 aa16.32■□□□□ 0.2
COPS7B-212ENST00000436564 GLI3P10071 1580 aa16.31■□□□□ 0.2
COPS7B-212ENST00000436564 A0A0G2JS52 829 aa16.31■□□□□ 0.2
COPS7B-212ENST00000436564 MYT1Q01538 1121 aa16.31■□□□□ 0.2
COPS7B-212ENST00000436564 PSME1Q06323 249 aa16.31■□□□□ 0.2
COPS7B-212ENST00000436564 RGL3Q3MIN7 710 aa16.31■□□□□ 0.2
COPS7B-212ENST00000436564 TMEM132EQ6IEE7 984 aa16.31■□□□□ 0.2
COPS7B-212ENST00000436564 ONECUT3O60422 494 aaPredicted RBP16.3■□□□□ 0.2
COPS7B-212ENST00000436564 LMOD2Q6P5Q4 547 aa16.3■□□□□ 0.2
COPS7B-212ENST00000436564 CABLES1Q8TDN4 633 aa16.3■□□□□ 0.2
COPS7B-212ENST00000436564 ABCC11Q96J66 1382 aa16.29■□□□□ 0.2
COPS7B-212ENST00000436564 PLEKHH1Q9ULM0 1364 aa16.29■□□□□ 0.2
COPS7B-212ENST00000436564 PSDA5PKW4 1024 aaPredicted RBP16.29■□□□□ 0.2
COPS7B-212ENST00000436564 BAG6P46379 1132 aa16.29■□□□□ 0.2
COPS7B-212ENST00000436564 ZNF692Q9BU19 519 aaPredicted RBP16.29■□□□□ 0.2
COPS7B-212ENST00000436564 TECPR2O15040 1411 aa16.28■□□□□ 0.2
COPS7B-212ENST00000436564 AKT1S1Q96B36 256 aa16.28■□□□□ 0.2
COPS7B-212ENST00000436564 PHF8Q9UPP1 1060 aa16.28■□□□□ 0.2
COPS7B-212ENST00000436564 RRBP1Q9P2E9 1410 aaKnown RBP16.28■□□□□ 0.2
COPS7B-212ENST00000436564 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.26■□□□□ 0.19
COPS7B-212ENST00000436564 MARF1Q9Y4F3 1742 aaKnown RBP16.26■□□□□ 0.19
COPS7B-212ENST00000436564 TNS3Q68CZ2 1445 aa16.26■□□□□ 0.19
COPS7B-212ENST00000436564 ANKRD30BQ9BXX2 1392 aa16.26■□□□□ 0.19
COPS7B-212ENST00000436564 HRCP23327 699 aa16.25■□□□□ 0.19
COPS7B-212ENST00000436564 USP32Q8NFA0 1604 aa16.25■□□□□ 0.19
COPS7B-212ENST00000436564 FAM83GA6ND36 823 aa16.24■□□□□ 0.19
COPS7B-212ENST00000436564 ARHGEF10O15013 1369 aa16.24■□□□□ 0.19
COPS7B-212ENST00000436564 FAM98CQ17RN3 349 aaKnown RBP16.23■□□□□ 0.19
COPS7B-212ENST00000436564 SIRT1Q96EB6 747 aa16.23■□□□□ 0.19
COPS7B-212ENST00000436564 SBNO1A3KN83 1393 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms