RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 NALCNQ8IZF0 1738 aa23.66■■□□□ 1.38
CALD1-209ENST00000436461 TMEM94Q12767 1356 aa23.65■■□□□ 1.38
CALD1-209ENST00000436461 SIRT1Q96EB6 747 aa23.65■■□□□ 1.38
CALD1-209ENST00000436461 MINK1Q8N4C8 1332 aaPredicted RBP23.65■■□□□ 1.38
CALD1-209ENST00000436461 C14orf37Q86TY3 774 aa23.62■■□□□ 1.37
CALD1-209ENST00000436461 TESK2Q96S53 571 aa23.6■■□□□ 1.37
CALD1-209ENST00000436461 ADGRL3Q9HAR2 1447 aa23.57■■□□□ 1.36
CALD1-209ENST00000436461 TULP4Q9NRJ4 1543 aa23.56■■□□□ 1.36
CALD1-209ENST00000436461 ADGRB2O60241 1585 aa23.55■■□□□ 1.36
CALD1-209ENST00000436461 DISP3Q9P2K9 1392 aa23.54■■□□□ 1.36
CALD1-209ENST00000436461 SBNO2Q9Y2G9 1366 aa23.54■■□□□ 1.36
CALD1-209ENST00000436461 NUTM2FA1L443 756 aa23.53■■□□□ 1.36
CALD1-209ENST00000436461 NCOA3Q9Y6Q9 1424 aa23.52■■□□□ 1.36
CALD1-209ENST00000436461 CDC42BPGQ6DT37 1551 aa23.51■■□□□ 1.35
CALD1-209ENST00000436461 MSH6P52701 1360 aa23.51■■□□□ 1.35
CALD1-209ENST00000436461 C11orf95C9JLR9 678 aaPredicted RBP23.51■■□□□ 1.35
CALD1-209ENST00000436461 C19orf44Q9H6X5 657 aa23.51■■□□□ 1.35
CALD1-209ENST00000436461 WASLO00401 505 aaPredicted RBP23.5■■□□□ 1.35
CALD1-209ENST00000436461 CDK19Q9BWU1 502 aa23.5■■□□□ 1.35
CALD1-209ENST00000436461 FMN2Q9NZ56 1722 aa23.49■■□□□ 1.35
CALD1-209ENST00000436461 CABP2Q9NPB3 220 aa23.49■■□□□ 1.35
CALD1-209ENST00000436461 RGPD8O14715 1765 aaPredicted RBP23.49■■□□□ 1.35
CALD1-209ENST00000436461 TMF1P82094 1093 aa23.48■■□□□ 1.35
CALD1-209ENST00000436461 EVC2Q86UK5 1308 aa23.48■■□□□ 1.35
CALD1-209ENST00000436461 SRPK2P78362 688 aaKnown RBP23.48■■□□□ 1.35
CALD1-209ENST00000436461 POLR3GLQ9BT43 218 aa23.47■■□□□ 1.35
CALD1-209ENST00000436461 USP32Q8NFA0 1604 aa23.46■■□□□ 1.35
CALD1-209ENST00000436461 ATF3P18847 181 aa23.45■■□□□ 1.34
CALD1-209ENST00000436461 CERKQ8TCT0 537 aa23.44■■□□□ 1.34
CALD1-209ENST00000436461 PRR36Q9H6K5 1346 aa23.44■■□□□ 1.34
CALD1-209ENST00000436461 DCCP43146 1447 aa23.43■■□□□ 1.34
CALD1-209ENST00000436461 ATP7BP35670 1465 aa23.42■■□□□ 1.34
CALD1-209ENST00000436461 CADPS2Q86UW7 1296 aa23.41■■□□□ 1.34
CALD1-209ENST00000436461 KIF7Q2M1P5 1343 aa23.41■■□□□ 1.34
CALD1-209ENST00000436461 MST1RQ04912 1400 aa23.41■■□□□ 1.34
CALD1-209ENST00000436461 WASHC2AQ641Q2 1341 aa23.4■■□□□ 1.34
CALD1-209ENST00000436461 NUDT16Q96DE0 195 aaKnown RBP23.4■■□□□ 1.34
CALD1-209ENST00000436461 SLC24A1O60721 1099 aa23.38■■□□□ 1.33
CALD1-209ENST00000436461 C1orf167Q5SNV9 1468 aa23.38■■□□□ 1.33
CALD1-209ENST00000436461 TOPAZ1Q8N9V7 1692 aa23.38■■□□□ 1.33
CALD1-209ENST00000436461 MYOM1P52179 1685 aa23.37■■□□□ 1.33
CALD1-209ENST00000436461 CCDC7Q96M83 1385 aa23.37■■□□□ 1.33
CALD1-209ENST00000436461 ZNF316A6NFI3 1004 aaPredicted RBP23.37■■□□□ 1.33
CALD1-209ENST00000436461 ITSN1Q15811 1721 aa23.36■■□□□ 1.33
CALD1-209ENST00000436461 IQSEC2Q5JU85 1478 aa23.36■■□□□ 1.33
CALD1-209ENST00000436461 ORAI2Q96SN7 254 aa23.36■■□□□ 1.33
CALD1-209ENST00000436461 ANKARQ7Z5J8 1434 aa23.35■■□□□ 1.33
CALD1-209ENST00000436461 CDCA8Q53HL2 280 aa23.34■■□□□ 1.33
CALD1-209ENST00000436461 ESCO1Q5FWF5 840 aa23.34■■□□□ 1.33
CALD1-209ENST00000436461 PPIP5K1Q6PFW1 1433 aa23.34■■□□□ 1.33
CALD1-209ENST00000436461 TMC1Q8TDI8 760 aa23.34■■□□□ 1.33
CALD1-209ENST00000436461 SLAIN2Q9P270 581 aa23.34■■□□□ 1.33
CALD1-209ENST00000436461 ATAD2Q6PL18 1390 aa23.34■■□□□ 1.33
CALD1-209ENST00000436461 PMFBP1Q8TBY8 1022 aa23.33■■□□□ 1.33
CALD1-209ENST00000436461 SLC12A5Q9H2X9 1139 aa23.33■■□□□ 1.32
CALD1-209ENST00000436461 CABP1Q9NZU7 370 aa23.33■■□□□ 1.32
CALD1-209ENST00000436461 CCDC61Q9Y6R9 512 aa23.33■■□□□ 1.32
CALD1-209ENST00000436461 UBAP1LF5GYI3 381 aa23.32■■□□□ 1.32
CALD1-209ENST00000436461 PUS7Q96PZ0 661 aaKnown RBP23.3■■□□□ 1.32
CALD1-209ENST00000436461 PIP4K2BP78356 416 aa23.3■■□□□ 1.32
CALD1-209ENST00000436461 TOM1O60784 492 aa23.29■■□□□ 1.32
CALD1-209ENST00000436461 ROBO1Q9Y6N7 1651 aa23.29■■□□□ 1.32
CALD1-209ENST00000436461 BRINP3Q76B58 766 aa23.28■■□□□ 1.32
CALD1-209ENST00000436461 PHF8Q9UPP1 1060 aa23.28■■□□□ 1.32
CALD1-209ENST00000436461 SCAF1Q9H7N4 1312 aaKnown RBP23.28■■□□□ 1.32
CALD1-209ENST00000436461 DDX17Q92841 729 aaKnown RBP23.27■■□□□ 1.32
CALD1-209ENST00000436461 CD163L1Q9NR16 1453 aa23.26■■□□□ 1.31
CALD1-209ENST00000436461 KIF1AQ12756 1690 aa23.25■■□□□ 1.31
CALD1-209ENST00000436461 ACEP12821 1306 aa23.25■■□□□ 1.31
CALD1-209ENST00000436461 AKAP12Q02952 1782 aa23.24■■□□□ 1.31
CALD1-209ENST00000436461 PLEKHG3A1L390 1219 aa23.24■■□□□ 1.31
CALD1-209ENST00000436461 FOXO3O43524 673 aa23.24■■□□□ 1.31
CALD1-209ENST00000436461 XPCQ01831 940 aaPredicted RBP23.23■■□□□ 1.31
CALD1-209ENST00000436461 NGDNQ8NEJ9 315 aaKnown RBP23.23■■□□□ 1.31
CALD1-209ENST00000436461 A0A1W2PP64 1363 aa23.22■■□□□ 1.31
CALD1-209ENST00000436461 DDX10Q13206 875 aaKnown RBP23.22■■□□□ 1.31
CALD1-209ENST00000436461 NINLQ9Y2I6 1382 aa23.21■■□□□ 1.31
CALD1-209ENST00000436461 POLR3AO14802 1390 aaPredicted RBP23.2■■□□□ 1.3
CALD1-209ENST00000436461 PANK3Q9H999 370 aa23.2■■□□□ 1.3
CALD1-209ENST00000436461 MON2Q7Z3U7 1717 aa23.2■■□□□ 1.3
CALD1-209ENST00000436461 CPSF1Q10570 1443 aaKnown RBP23.19■■□□□ 1.3
CALD1-209ENST00000436461 NHSL1Q5SYE7 1610 aa23.19■■□□□ 1.3
CALD1-209ENST00000436461 ANKRD36BQ8N2N9 1353 aa23.19■■□□□ 1.3
CALD1-209ENST00000436461 KTN1Q86UP2 1357 aaKnown RBP23.17■■□□□ 1.3
CALD1-209ENST00000436461 HDGFL2Q7Z4V5 671 aaPredicted RBP23.17■■□□□ 1.3
CALD1-209ENST00000436461 TERF2IPQ9NYB0 399 aa23.17■■□□□ 1.3
CALD1-209ENST00000436461 PSME1Q06323 249 aa23.16■■□□□ 1.3
CALD1-209ENST00000436461 CARD14Q9BXL6 1004 aa23.16■■□□□ 1.3
CALD1-209ENST00000436461 USP6P35125 1406 aa23.15■■□□□ 1.3
CALD1-209ENST00000436461 NRKQ7Z2Y5 1582 aa23.15■■□□□ 1.3
CALD1-209ENST00000436461 NPHP3Q7Z494 1330 aa23.14■■□□□ 1.3
CALD1-209ENST00000436461 KRT28Q7Z3Y7 464 aa23.14■■□□□ 1.29
CALD1-209ENST00000436461 PXDNQ92626 1479 aa23.13■■□□□ 1.29
CALD1-209ENST00000436461 TRPM3Q9HCF6 1732 aaPredicted RBP23.13■■□□□ 1.29
CALD1-209ENST00000436461 NSD3Q9BZ95 1437 aa23.13■■□□□ 1.29
CALD1-209ENST00000436461 PHLPP1O60346 1717 aa23.13■■□□□ 1.29
CALD1-209ENST00000436461 AHDC1Q5TGY3 1603 aaPredicted RBP23.12■■□□□ 1.29
CALD1-209ENST00000436461 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.11■■□□□ 1.29
CALD1-209ENST00000436461 ZNF692Q9BU19 519 aaPredicted RBP23.11■■□□□ 1.29
CALD1-209ENST00000436461 PAK3O75914 559 aaPredicted RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms