RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 COL22A1Q8NFW1 1626 aaPredicted RBP27.66■■■□□ 2.02
UBXN1-203ENST00000436354 SLC4A1APQ9BWU0 796 aaKnown RBP27.65■■■□□ 2.02
UBXN1-203ENST00000436354 NPHP3Q7Z494 1330 aa27.63■■■□□ 2.01
UBXN1-203ENST00000436354 CDC42BPGQ6DT37 1551 aa27.62■■■□□ 2.01
UBXN1-203ENST00000436354 ESCO1Q5FWF5 840 aa27.61■■■□□ 2.01
UBXN1-203ENST00000436354 ATRNO75882 1429 aa27.59■■■□□ 2.01
UBXN1-203ENST00000436354 MYOM2P54296 1465 aa27.58■■■□□ 2.01
UBXN1-203ENST00000436354 PXDNQ92626 1479 aa27.56■■■□□ 2
UBXN1-203ENST00000436354 MARF1Q9Y4F3 1742 aaKnown RBP27.55■■■□□ 2
UBXN1-203ENST00000436354 FOXO3O43524 673 aa27.55■■■□□ 2
UBXN1-203ENST00000436354 FOXD1Q16676 465 aa27.55■■■□□ 2
UBXN1-203ENST00000436354 LRPPRCP42704 1394 aaKnown RBP27.54■■■□□ 2
UBXN1-203ENST00000436354 BCL9LQ86UU0 1499 aa27.52■■■□□ 2
UBXN1-203ENST00000436354 ADGRF5Q8IZF2 1346 aa27.52■■■□□ 2
UBXN1-203ENST00000436354 TECPR2O15040 1411 aa27.51■■□□□ 1.99
UBXN1-203ENST00000436354 XPCQ01831 940 aaPredicted RBP27.51■■□□□ 1.99
UBXN1-203ENST00000436354 STK26Q9P289 416 aa27.51■■□□□ 1.99
UBXN1-203ENST00000436354 CCDC144AA2RUR9 1427 aa27.5■■□□□ 1.99
UBXN1-203ENST00000436354 WAPLQ7Z5K2 1190 aa27.49■■□□□ 1.99
UBXN1-203ENST00000436354 ANKRD30BQ9BXX2 1392 aa27.48■■□□□ 1.99
UBXN1-203ENST00000436354 RGL3Q3MIN7 710 aa27.48■■□□□ 1.99
UBXN1-203ENST00000436354 CCDC125Q86Z20 511 aa27.48■■□□□ 1.99
UBXN1-203ENST00000436354 GJD4Q96KN9 370 aaPredicted RBP27.48■■□□□ 1.99
UBXN1-203ENST00000436354 NUTM2FA1L443 756 aa27.47■■□□□ 1.99
UBXN1-203ENST00000436354 ZRANB1Q9UGI0 708 aa27.47■■□□□ 1.99
UBXN1-203ENST00000436354 ABCC11Q96J66 1382 aa27.47■■□□□ 1.99
UBXN1-203ENST00000436354 IFT172Q9UG01 1749 aa27.46■■□□□ 1.99
UBXN1-203ENST00000436354 KNDC1Q76NI1 1749 aa27.45■■□□□ 1.99
UBXN1-203ENST00000436354 SPATA31E1Q6ZUB1 1445 aa27.45■■□□□ 1.98
UBXN1-203ENST00000436354 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.44■■□□□ 1.98
UBXN1-203ENST00000436354 TMEM132EQ6IEE7 984 aa27.43■■□□□ 1.98
UBXN1-203ENST00000436354 FMN2Q9NZ56 1722 aa27.43■■□□□ 1.98
UBXN1-203ENST00000436354 KIF1AQ12756 1690 aa27.42■■□□□ 1.98
UBXN1-203ENST00000436354 SPATA31A3Q5VYP0 1347 aa27.41■■□□□ 1.98
UBXN1-203ENST00000436354 PLEKHH1Q9ULM0 1364 aa27.41■■□□□ 1.98
UBXN1-203ENST00000436354 UNC5CLQ8IV45 518 aa27.4■■□□□ 1.98
UBXN1-203ENST00000436354 PIK3C2GO75747 1445 aa27.4■■□□□ 1.98
UBXN1-203ENST00000436354 SLIT2O94813 1529 aa27.38■■□□□ 1.97
UBXN1-203ENST00000436354 MPHOSPH9Q99550 1183 aa27.38■■□□□ 1.97
UBXN1-203ENST00000436354 EP400Q96L91 3159 aa27.38■■□□□ 1.97
UBXN1-203ENST00000436354 YTHDC2Q9H6S0 1430 aaKnown RBP27.38■■□□□ 1.97
UBXN1-203ENST00000436354 KRT28Q7Z3Y7 464 aa27.37■■□□□ 1.97
UBXN1-203ENST00000436354 SIRT1Q96EB6 747 aa27.36■■□□□ 1.97
UBXN1-203ENST00000436354 RALGAPBQ86X10 1494 aa27.36■■□□□ 1.97
UBXN1-203ENST00000436354 GLI3P10071 1580 aa27.35■■□□□ 1.97
UBXN1-203ENST00000436354 USP32Q8NFA0 1604 aa27.34■■□□□ 1.97
UBXN1-203ENST00000436354 SRCAPQ6ZRS2 3230 aa27.32■■□□□ 1.96
UBXN1-203ENST00000436354 HAP1P54257 671 aaPredicted RBP27.32■■□□□ 1.96
UBXN1-203ENST00000436354 PSME1Q06323 249 aa27.32■■□□□ 1.96
UBXN1-203ENST00000436354 RGPD8O14715 1765 aaPredicted RBP27.31■■□□□ 1.96
UBXN1-203ENST00000436354 PHF8Q9UPP1 1060 aa27.31■■□□□ 1.96
UBXN1-203ENST00000436354 BLMP54132 1417 aaPredicted RBP27.31■■□□□ 1.96
UBXN1-203ENST00000436354 C14orf93Q9H972 538 aaKnown RBP27.3■■□□□ 1.96
UBXN1-203ENST00000436354 TNS3Q68CZ2 1445 aa27.3■■□□□ 1.96
UBXN1-203ENST00000436354 BRWD3Q6RI45 1802 aa27.28■■□□□ 1.96
UBXN1-203ENST00000436354 DHX57Q6P158 1386 aaKnown RBP27.28■■□□□ 1.96
UBXN1-203ENST00000436354 VPS72Q15906 364 aa27.26■■□□□ 1.95
UBXN1-203ENST00000436354 SBNO1A3KN83 1393 aa27.25■■□□□ 1.95
UBXN1-203ENST00000436354 NWD2Q9ULI1 1742 aa27.25■■□□□ 1.95
UBXN1-203ENST00000436354 SEPT12Q8IYM1 358 aa27.25■■□□□ 1.95
UBXN1-203ENST00000436354 CABLES1Q8TDN4 633 aa27.25■■□□□ 1.95
UBXN1-203ENST00000436354 ACIN1Q9UKV3 1341 aaKnown RBP27.24■■□□□ 1.95
UBXN1-203ENST00000436354 SF3B2Q13435 895 aaKnown RBP27.24■■□□□ 1.95
UBXN1-203ENST00000436354 NRXN1Q9ULB1 1477 aa27.24■■□□□ 1.95
UBXN1-203ENST00000436354 PLCH1Q4KWH8 1693 aa27.24■■□□□ 1.95
UBXN1-203ENST00000436354 CFAP70Q5T0N1 1121 aa27.23■■□□□ 1.95
UBXN1-203ENST00000436354 ARHGEF10O15013 1369 aa27.22■■□□□ 1.95
UBXN1-203ENST00000436354 PLEKHG5O94827 1062 aa27.22■■□□□ 1.95
UBXN1-203ENST00000436354 LMOD2Q6P5Q4 547 aa27.22■■□□□ 1.95
UBXN1-203ENST00000436354 PRAM1Q96QH2 718 aa27.22■■□□□ 1.95
UBXN1-203ENST00000436354 CCDC9Q9Y3X0 531 aaKnown RBP27.22■■□□□ 1.95
UBXN1-203ENST00000436354 ONECUT3O60422 494 aaPredicted RBP27.21■■□□□ 1.95
UBXN1-203ENST00000436354 ABCA3Q99758 1704 aa27.21■■□□□ 1.95
UBXN1-203ENST00000436354 SAFB2Q14151 953 aaKnown RBP eCLIP27.2■■□□□ 1.94
UBXN1-203ENST00000436354 DEFB132Q7Z7B7 95 aa27.2■■□□□ 1.94
UBXN1-203ENST00000436354 KRT27Q7Z3Y8 459 aa27.17■■□□□ 1.94
UBXN1-203ENST00000436354 POGKQ9P215 609 aa27.17■■□□□ 1.94
UBXN1-203ENST00000436354 ANKARQ7Z5J8 1434 aa27.16■■□□□ 1.94
UBXN1-203ENST00000436354 DLC1Q96QB1 1528 aa27.16■■□□□ 1.94
UBXN1-203ENST00000436354 PMFBP1Q8TBY8 1022 aa27.16■■□□□ 1.94
UBXN1-203ENST00000436354 FAM83GA6ND36 823 aa27.14■■□□□ 1.94
UBXN1-203ENST00000436354 ADGRB2O60241 1585 aa27.12■■□□□ 1.93
UBXN1-203ENST00000436354 A0A0G2JS52 829 aa27.11■■□□□ 1.93
UBXN1-203ENST00000436354 MYT1Q01538 1121 aa27.11■■□□□ 1.93
UBXN1-203ENST00000436354 NRAPQ86VF7 1730 aa27.09■■□□□ 1.93
UBXN1-203ENST00000436354 TRPM3Q9HCF6 1732 aaPredicted RBP27.09■■□□□ 1.93
UBXN1-203ENST00000436354 GPRASP1Q5JY77 1395 aa27.09■■□□□ 1.93
UBXN1-203ENST00000436354 BTG4Q9NY30 223 aa27.08■■□□□ 1.93
UBXN1-203ENST00000436354 EIF3AQ14152 1382 aaKnown RBP27.08■■□□□ 1.93
UBXN1-203ENST00000436354 COL14A1Q05707 1796 aaKnown RBP27.07■■□□□ 1.92
UBXN1-203ENST00000436354 ADGRB1O14514 1584 aa27.06■■□□□ 1.92
UBXN1-203ENST00000436354 ALS2Q96Q42 1657 aa27.06■■□□□ 1.92
UBXN1-203ENST00000436354 BAG6P46379 1132 aa27.06■■□□□ 1.92
UBXN1-203ENST00000436354 FAM98CQ17RN3 349 aaKnown RBP27.06■■□□□ 1.92
UBXN1-203ENST00000436354 TRAK1Q9UPV9 953 aa27.06■■□□□ 1.92
UBXN1-203ENST00000436354 HIRIP3Q9BW71 556 aaPredicted RBP27.05■■□□□ 1.92
UBXN1-203ENST00000436354 LRP5O75197 1615 aa27.05■■□□□ 1.92
UBXN1-203ENST00000436354 MINK1Q8N4C8 1332 aaPredicted RBP27.03■■□□□ 1.92
UBXN1-203ENST00000436354 TULP4Q9NRJ4 1543 aa27.02■■□□□ 1.92
UBXN1-203ENST00000436354 PRR36Q9H6K5 1346 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms