RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 PHLPP1O60346 1717 aa30.2■■■□□ 2.43
GTF3A-203ENST00000435781 TRPM1Q7Z4N2 1603 aa30.2■■■□□ 2.43
GTF3A-203ENST00000435781 TRAK1Q9UPV9 953 aa30.19■■■□□ 2.42
GTF3A-203ENST00000435781 PRAM1Q96QH2 718 aa30.18■■■□□ 2.42
GTF3A-203ENST00000435781 FMN2Q9NZ56 1722 aa30.17■■■□□ 2.42
GTF3A-203ENST00000435781 TONSLQ96HA7 1378 aa30.16■■■□□ 2.42
GTF3A-203ENST00000435781 AHDC1Q5TGY3 1603 aaPredicted RBP30.15■■■□□ 2.42
GTF3A-203ENST00000435781 C1orf167Q5SNV9 1468 aa30.15■■■□□ 2.42
GTF3A-203ENST00000435781 NBPF1Q3BBV0 1214 aa30.15■■■□□ 2.42
GTF3A-203ENST00000435781 BRINP3Q76B58 766 aa30.15■■■□□ 2.42
GTF3A-203ENST00000435781 NHSL1Q5SYE7 1610 aa30.14■■■□□ 2.41
GTF3A-203ENST00000435781 POGKQ9P215 609 aa30.13■■■□□ 2.41
GTF3A-203ENST00000435781 ADGRB2O60241 1585 aa30.12■■■□□ 2.41
GTF3A-203ENST00000435781 COL16A1Q07092 1604 aaPredicted RBP30.12■■■□□ 2.41
GTF3A-203ENST00000435781 SAFB2Q14151 953 aaKnown RBP eCLIP30.12■■■□□ 2.41
GTF3A-203ENST00000435781 RGPD8O14715 1765 aaPredicted RBP30.1■■■□□ 2.41
GTF3A-203ENST00000435781 CLSPNQ9HAW4 1339 aa30.07■■■□□ 2.4
GTF3A-203ENST00000435781 NBPF8Q3BBV2 869 aa30.06■■■□□ 2.4
GTF3A-203ENST00000435781 ORAI2Q96SN7 254 aa30.03■■■□□ 2.4
GTF3A-203ENST00000435781 MINK1Q8N4C8 1332 aaPredicted RBP30.02■■■□□ 2.4
GTF3A-203ENST00000435781 NUTM2FA1L443 756 aa30.02■■■□□ 2.4
GTF3A-203ENST00000435781 ROCK2O75116 1388 aaKnown RBP30.02■■■□□ 2.4
GTF3A-203ENST00000435781 HIRIP3Q9BW71 556 aaPredicted RBP30■■■□□ 2.39
GTF3A-203ENST00000435781 USP32Q8NFA0 1604 aa30■■■□□ 2.39
GTF3A-203ENST00000435781 QRICH2Q9H0J4 1663 aa29.99■■■□□ 2.39
GTF3A-203ENST00000435781 MED1Q15648 1581 aaPredicted RBP29.98■■■□□ 2.39
GTF3A-203ENST00000435781 KIF1AQ12756 1690 aa29.98■■■□□ 2.39
GTF3A-203ENST00000435781 RALGAPBQ86X10 1494 aa29.98■■■□□ 2.39
GTF3A-203ENST00000435781 ESCO1Q5FWF5 840 aa29.97■■■□□ 2.39
GTF3A-203ENST00000435781 DDX17Q92841 729 aaKnown RBP29.97■■■□□ 2.39
GTF3A-203ENST00000435781 SHPRHQ149N8 1683 aa29.96■■■□□ 2.39
GTF3A-203ENST00000435781 GPRASP1Q5JY77 1395 aa29.96■■■□□ 2.39
GTF3A-203ENST00000435781 CCER1Q8TC90 406 aaPredicted RBP29.96■■■□□ 2.39
GTF3A-203ENST00000435781 JCADQ9P266 1359 aa29.94■■■□□ 2.38
GTF3A-203ENST00000435781 ANKARQ7Z5J8 1434 aa29.94■■■□□ 2.38
GTF3A-203ENST00000435781 TULP4Q9NRJ4 1543 aa29.93■■■□□ 2.38
GTF3A-203ENST00000435781 CENPJQ9HC77 1338 aaPredicted RBP29.93■■■□□ 2.38
GTF3A-203ENST00000435781 WASLO00401 505 aaPredicted RBP29.92■■■□□ 2.38
GTF3A-203ENST00000435781 EIF3AQ14152 1382 aaKnown RBP29.91■■■□□ 2.38
GTF3A-203ENST00000435781 ITSN1Q15811 1721 aa29.9■■■□□ 2.38
GTF3A-203ENST00000435781 SOS2Q07890 1332 aaPredicted RBP29.88■■■□□ 2.37
GTF3A-203ENST00000435781 PXDNQ92626 1479 aa29.87■■■□□ 2.37
GTF3A-203ENST00000435781 TIMELESSQ9UNS1 1208 aa29.87■■■□□ 2.37
GTF3A-203ENST00000435781 NPHP3Q7Z494 1330 aa29.87■■■□□ 2.37
GTF3A-203ENST00000435781 PRR36Q9H6K5 1346 aa29.86■■■□□ 2.37
GTF3A-203ENST00000435781 FOXO3O43524 673 aa29.85■■■□□ 2.37
GTF3A-203ENST00000435781 LRRC59Q96AG4 307 aaKnown RBP29.85■■■□□ 2.37
GTF3A-203ENST00000435781 CARD11Q9BXL7 1154 aa29.85■■■□□ 2.37
GTF3A-203ENST00000435781 PHF8Q9UPP1 1060 aa29.85■■■□□ 2.37
GTF3A-203ENST00000435781 DISP3Q9P2K9 1392 aa29.85■■■□□ 2.37
GTF3A-203ENST00000435781 ATP7BP35670 1465 aa29.84■■■□□ 2.37
GTF3A-203ENST00000435781 TOPAZ1Q8N9V7 1692 aa29.83■■■□□ 2.37
GTF3A-203ENST00000435781 CDK19Q9BWU1 502 aa29.82■■■□□ 2.36
GTF3A-203ENST00000435781 PNPLA6Q8IY17 1366 aa29.8■■■□□ 2.36
GTF3A-203ENST00000435781 XPCQ01831 940 aaPredicted RBP29.8■■■□□ 2.36
GTF3A-203ENST00000435781 SPATA31A6Q5VVP1 1343 aa29.79■■■□□ 2.36
GTF3A-203ENST00000435781 PMFBP1Q8TBY8 1022 aa29.77■■■□□ 2.36
GTF3A-203ENST00000435781 NUDT16Q96DE0 195 aaKnown RBP29.77■■■□□ 2.36
GTF3A-203ENST00000435781 LRP6O75581 1613 aa29.77■■■□□ 2.36
GTF3A-203ENST00000435781 COL22A1Q8NFW1 1626 aaPredicted RBP29.76■■■□□ 2.35
GTF3A-203ENST00000435781 KRT28Q7Z3Y7 464 aa29.73■■■□□ 2.35
GTF3A-203ENST00000435781 TRPM3Q9HCF6 1732 aaPredicted RBP29.73■■■□□ 2.35
GTF3A-203ENST00000435781 SRPK2P78362 688 aaKnown RBP29.72■■■□□ 2.35
GTF3A-203ENST00000435781 SBNO2Q9Y2G9 1366 aa29.72■■■□□ 2.35
GTF3A-203ENST00000435781 EVC2Q86UK5 1308 aa29.71■■■□□ 2.35
GTF3A-203ENST00000435781 CABP2Q9NPB3 220 aa29.7■■■□□ 2.35
GTF3A-203ENST00000435781 PSME1Q06323 249 aa29.69■■■□□ 2.34
GTF3A-203ENST00000435781 PHF23Q9BUL5 403 aaPredicted RBP29.69■■■□□ 2.34
GTF3A-203ENST00000435781 CCDC61Q9Y6R9 512 aa29.69■■■□□ 2.34
GTF3A-203ENST00000435781 NUTM2BA6NNL0 878 aaPredicted RBP29.68■■■□□ 2.34
GTF3A-203ENST00000435781 NUTM2EB1AL46 878 aaPredicted RBP29.68■■■□□ 2.34
GTF3A-203ENST00000435781 NUTM2AQ8IVF1 878 aaPredicted RBP29.68■■■□□ 2.34
GTF3A-203ENST00000435781 SPATA31A3Q5VYP0 1347 aa29.68■■■□□ 2.34
GTF3A-203ENST00000435781 TNS3Q68CZ2 1445 aa29.67■■■□□ 2.34
GTF3A-203ENST00000435781 SBNO1A3KN83 1393 aa29.66■■■□□ 2.34
GTF3A-203ENST00000435781 NGDNQ8NEJ9 315 aaKnown RBP29.66■■■□□ 2.34
GTF3A-203ENST00000435781 ALS2Q96Q42 1657 aa29.66■■■□□ 2.34
GTF3A-203ENST00000435781 PPIP5K1Q6PFW1 1433 aa29.64■■■□□ 2.34
GTF3A-203ENST00000435781 POLR3AO14802 1390 aaPredicted RBP29.64■■■□□ 2.33
GTF3A-203ENST00000435781 PLEKHG3A1L390 1219 aa29.63■■■□□ 2.33
GTF3A-203ENST00000435781 MARF1Q9Y4F3 1742 aaKnown RBP29.62■■■□□ 2.33
GTF3A-203ENST00000435781 MEX3CQ5U5Q3 659 aaKnown RBP29.62■■■□□ 2.33
GTF3A-203ENST00000435781 USP47Q96K76 1375 aa29.62■■■□□ 2.33
GTF3A-203ENST00000435781 ABCA3Q99758 1704 aa29.61■■■□□ 2.33
GTF3A-203ENST00000435781 ST20-MTHFSA0A0A6YYL1 179 aa29.6■■■□□ 2.33
GTF3A-203ENST00000435781 ACEP12821 1306 aa29.6■■■□□ 2.33
GTF3A-203ENST00000435781 RGS17Q9UGC6 210 aaPredicted RBP29.59■■■□□ 2.33
GTF3A-203ENST00000435781 ARHGEF10O15013 1369 aa29.58■■■□□ 2.33
GTF3A-203ENST00000435781 TESK2Q96S53 571 aa29.57■■■□□ 2.32
GTF3A-203ENST00000435781 AKAP12Q02952 1782 aa29.57■■■□□ 2.32
GTF3A-203ENST00000435781 ATAD2Q6PL18 1390 aa29.56■■■□□ 2.32
GTF3A-203ENST00000435781 LMOD2Q6P5Q4 547 aa29.55■■■□□ 2.32
GTF3A-203ENST00000435781 CABP1Q9NZU7 370 aa29.55■■■□□ 2.32
GTF3A-203ENST00000435781 ADAMTS2O95450 1211 aa29.54■■■□□ 2.32
GTF3A-203ENST00000435781 CRYBG1Q9Y4K1 1723 aa29.53■■■□□ 2.32
GTF3A-203ENST00000435781 ILDR2Q71H61 639 aa29.52■■■□□ 2.32
GTF3A-203ENST00000435781 PAK3O75914 559 aaPredicted RBP29.51■■■□□ 2.31
GTF3A-203ENST00000435781 C8orf37Q96NL8 207 aa29.49■■■□□ 2.31
GTF3A-203ENST00000435781 SLC24A1O60721 1099 aa29.48■■■□□ 2.31
GTF3A-203ENST00000435781 CABLES1Q8TDN4 633 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms