RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 PLEKHH1Q9ULM0 1364 aa26.48■■□□□ 1.83
HLA-F-220ENST00000434407 CLSPNQ9HAW4 1339 aa26.48■■□□□ 1.83
HLA-F-220ENST00000434407 MST1RQ04912 1400 aa26.47■■□□□ 1.83
HLA-F-220ENST00000434407 HSPA1LP34931 641 aa26.45■■□□□ 1.82
HLA-F-220ENST00000434407 CDC42BPGQ6DT37 1551 aa26.45■■□□□ 1.82
HLA-F-220ENST00000434407 TRPM1Q7Z4N2 1603 aa26.43■■□□□ 1.82
HLA-F-220ENST00000434407 NBPF1Q3BBV0 1214 aa26.43■■□□□ 1.82
HLA-F-220ENST00000434407 TONSLQ96HA7 1378 aa26.43■■□□□ 1.82
HLA-F-220ENST00000434407 ARHGEF28Q8N1W1 1705 aaKnown RBP26.42■■□□□ 1.82
HLA-F-220ENST00000434407 TRAK1Q9UPV9 953 aa26.42■■□□□ 1.82
HLA-F-220ENST00000434407 PRAM1Q96QH2 718 aa26.41■■□□□ 1.82
HLA-F-220ENST00000434407 C1orf167Q5SNV9 1468 aa26.39■■□□□ 1.82
HLA-F-220ENST00000434407 NBPF8Q3BBV2 869 aa26.38■■□□□ 1.81
HLA-F-220ENST00000434407 BRINP3Q76B58 766 aa26.37■■□□□ 1.81
HLA-F-220ENST00000434407 POGKQ9P215 609 aa26.36■■□□□ 1.81
HLA-F-220ENST00000434407 ADGRB2O60241 1585 aa26.36■■□□□ 1.81
HLA-F-220ENST00000434407 FMN2Q9NZ56 1722 aa26.35■■□□□ 1.81
HLA-F-220ENST00000434407 AHDC1Q5TGY3 1603 aaPredicted RBP26.34■■□□□ 1.81
HLA-F-220ENST00000434407 GPRASP1Q5JY77 1395 aa26.33■■□□□ 1.8
HLA-F-220ENST00000434407 PHLPP1O60346 1717 aa26.32■■□□□ 1.8
HLA-F-220ENST00000434407 SAFB2Q14151 953 aaKnown RBP eCLIP26.32■■□□□ 1.8
HLA-F-220ENST00000434407 TIMELESSQ9UNS1 1208 aa26.31■■□□□ 1.8
HLA-F-220ENST00000434407 NHSL1Q5SYE7 1610 aa26.31■■□□□ 1.8
HLA-F-220ENST00000434407 ROCK2O75116 1388 aaKnown RBP26.29■■□□□ 1.8
HLA-F-220ENST00000434407 COL16A1Q07092 1604 aaPredicted RBP26.28■■□□□ 1.8
HLA-F-220ENST00000434407 RALGAPBQ86X10 1494 aa26.28■■□□□ 1.8
HLA-F-220ENST00000434407 CCER1Q8TC90 406 aaPredicted RBP26.27■■□□□ 1.8
HLA-F-220ENST00000434407 ORAI2Q96SN7 254 aa26.27■■□□□ 1.8
HLA-F-220ENST00000434407 RGPD8O14715 1765 aaPredicted RBP26.26■■□□□ 1.79
HLA-F-220ENST00000434407 MINK1Q8N4C8 1332 aaPredicted RBP26.25■■□□□ 1.79
HLA-F-220ENST00000434407 HIRIP3Q9BW71 556 aaPredicted RBP26.23■■□□□ 1.79
HLA-F-220ENST00000434407 USP32Q8NFA0 1604 aa26.22■■□□□ 1.79
HLA-F-220ENST00000434407 WASLO00401 505 aaPredicted RBP26.22■■□□□ 1.79
HLA-F-220ENST00000434407 ANKARQ7Z5J8 1434 aa26.22■■□□□ 1.79
HLA-F-220ENST00000434407 CENPJQ9HC77 1338 aaPredicted RBP26.21■■□□□ 1.79
HLA-F-220ENST00000434407 QRICH2Q9H0J4 1663 aa26.2■■□□□ 1.78
HLA-F-220ENST00000434407 NUTM2FA1L443 756 aa26.2■■□□□ 1.78
HLA-F-220ENST00000434407 ESCO1Q5FWF5 840 aa26.2■■□□□ 1.78
HLA-F-220ENST00000434407 TULP4Q9NRJ4 1543 aa26.19■■□□□ 1.78
HLA-F-220ENST00000434407 EIF3AQ14152 1382 aaKnown RBP26.19■■□□□ 1.78
HLA-F-220ENST00000434407 KIF1AQ12756 1690 aa26.19■■□□□ 1.78
HLA-F-220ENST00000434407 DDX17Q92841 729 aaKnown RBP26.18■■□□□ 1.78
HLA-F-220ENST00000434407 CARD11Q9BXL7 1154 aa26.17■■□□□ 1.78
HLA-F-220ENST00000434407 JCADQ9P266 1359 aa26.17■■□□□ 1.78
HLA-F-220ENST00000434407 SOS2Q07890 1332 aaPredicted RBP26.16■■□□□ 1.78
HLA-F-220ENST00000434407 PRR36Q9H6K5 1346 aa26.15■■□□□ 1.78
HLA-F-220ENST00000434407 SHPRHQ149N8 1683 aa26.15■■□□□ 1.78
HLA-F-220ENST00000434407 NPHP3Q7Z494 1330 aa26.14■■□□□ 1.77
HLA-F-220ENST00000434407 ATP7BP35670 1465 aa26.12■■□□□ 1.77
HLA-F-220ENST00000434407 PXDNQ92626 1479 aa26.12■■□□□ 1.77
HLA-F-220ENST00000434407 LRRC59Q96AG4 307 aaKnown RBP26.12■■□□□ 1.77
HLA-F-220ENST00000434407 CDK19Q9BWU1 502 aa26.12■■□□□ 1.77
HLA-F-220ENST00000434407 PHF8Q9UPP1 1060 aa26.12■■□□□ 1.77
HLA-F-220ENST00000434407 FOXO3O43524 673 aa26.11■■□□□ 1.77
HLA-F-220ENST00000434407 MED1Q15648 1581 aaPredicted RBP26.11■■□□□ 1.77
HLA-F-220ENST00000434407 ITSN1Q15811 1721 aa26.11■■□□□ 1.77
HLA-F-220ENST00000434407 SBNO2Q9Y2G9 1366 aa26.1■■□□□ 1.77
HLA-F-220ENST00000434407 NUDT16Q96DE0 195 aaKnown RBP26.08■■□□□ 1.77
HLA-F-220ENST00000434407 TOPAZ1Q8N9V7 1692 aa26.08■■□□□ 1.77
HLA-F-220ENST00000434407 SPATA31A6Q5VVP1 1343 aa26.05■■□□□ 1.76
HLA-F-220ENST00000434407 PNPLA6Q8IY17 1366 aa26.05■■□□□ 1.76
HLA-F-220ENST00000434407 PMFBP1Q8TBY8 1022 aa26.03■■□□□ 1.76
HLA-F-220ENST00000434407 CCDC61Q9Y6R9 512 aa26.03■■□□□ 1.76
HLA-F-220ENST00000434407 EVC2Q86UK5 1308 aa26.03■■□□□ 1.76
HLA-F-220ENST00000434407 XPCQ01831 940 aaPredicted RBP26.01■■□□□ 1.75
HLA-F-220ENST00000434407 KRT28Q7Z3Y7 464 aa26.01■■□□□ 1.75
HLA-F-220ENST00000434407 COL22A1Q8NFW1 1626 aaPredicted RBP26■■□□□ 1.75
HLA-F-220ENST00000434407 PLEKHG3A1L390 1219 aa26■■□□□ 1.75
HLA-F-220ENST00000434407 SRPK2P78362 688 aaKnown RBP26■■□□□ 1.75
HLA-F-220ENST00000434407 CABP2Q9NPB3 220 aa26■■□□□ 1.75
HLA-F-220ENST00000434407 TRPM3Q9HCF6 1732 aaPredicted RBP25.99■■□□□ 1.75
HLA-F-220ENST00000434407 SBNO1A3KN83 1393 aa25.98■■□□□ 1.75
HLA-F-220ENST00000434407 POLR3AO14802 1390 aaPredicted RBP25.98■■□□□ 1.75
HLA-F-220ENST00000434407 SPATA31A3Q5VYP0 1347 aa25.98■■□□□ 1.75
HLA-F-220ENST00000434407 PSME1Q06323 249 aa25.98■■□□□ 1.75
HLA-F-220ENST00000434407 LRP6O75581 1613 aa25.98■■□□□ 1.75
HLA-F-220ENST00000434407 ST20-MTHFSA0A0A6YYL1 179 aa25.97■■□□□ 1.75
HLA-F-220ENST00000434407 TESK2Q96S53 571 aa25.97■■□□□ 1.75
HLA-F-220ENST00000434407 USP47Q96K76 1375 aa25.96■■□□□ 1.75
HLA-F-220ENST00000434407 DISP3Q9P2K9 1392 aa25.96■■□□□ 1.75
HLA-F-220ENST00000434407 TNS3Q68CZ2 1445 aa25.95■■□□□ 1.74
HLA-F-220ENST00000434407 NGDNQ8NEJ9 315 aaKnown RBP25.94■■□□□ 1.74
HLA-F-220ENST00000434407 PPIP5K1Q6PFW1 1433 aa25.94■■□□□ 1.74
HLA-F-220ENST00000434407 ALS2Q96Q42 1657 aa25.93■■□□□ 1.74
HLA-F-220ENST00000434407 ACEP12821 1306 aa25.92■■□□□ 1.74
HLA-F-220ENST00000434407 SLC24A1O60721 1099 aa25.91■■□□□ 1.74
HLA-F-220ENST00000434407 PUS7Q96PZ0 661 aaKnown RBP25.91■■□□□ 1.74
HLA-F-220ENST00000434407 ATAD2Q6PL18 1390 aa25.91■■□□□ 1.74
HLA-F-220ENST00000434407 CABP1Q9NZU7 370 aa25.89■■□□□ 1.74
HLA-F-220ENST00000434407 ARHGEF10O15013 1369 aa25.88■■□□□ 1.73
HLA-F-220ENST00000434407 NUTM2BA6NNL0 878 aaPredicted RBP25.87■■□□□ 1.73
HLA-F-220ENST00000434407 NUTM2EB1AL46 878 aaPredicted RBP25.87■■□□□ 1.73
HLA-F-220ENST00000434407 NUTM2AQ8IVF1 878 aaPredicted RBP25.87■■□□□ 1.73
HLA-F-220ENST00000434407 RGS17Q9UGC6 210 aaPredicted RBP25.86■■□□□ 1.73
HLA-F-220ENST00000434407 AKAP12Q02952 1782 aa25.84■■□□□ 1.73
HLA-F-220ENST00000434407 BRD4O60885 1362 aaPredicted RBP25.84■■□□□ 1.73
HLA-F-220ENST00000434407 MARF1Q9Y4F3 1742 aaKnown RBP25.83■■□□□ 1.73
HLA-F-220ENST00000434407 ABCA3Q99758 1704 aa25.83■■□□□ 1.72
HLA-F-220ENST00000434407 USP6P35125 1406 aa25.81■■□□□ 1.72
HLA-F-220ENST00000434407 CPSF1Q10570 1443 aaKnown RBP25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms