RNA–Protein interactions for RNA: ENST00000434333.1

HLA-B-250, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-250ENST00000434333 MYOM2P54296 1465 aa29.8■■■□□ 2.36
HLA-B-250ENST00000434333 STK26Q9P289 416 aa29.79■■■□□ 2.36
HLA-B-250ENST00000434333 NUTM2BA6NNL0 878 aaPredicted RBP29.78■■■□□ 2.36
HLA-B-250ENST00000434333 NUTM2EB1AL46 878 aaPredicted RBP29.78■■■□□ 2.36
HLA-B-250ENST00000434333 NUTM2AQ8IVF1 878 aaPredicted RBP29.78■■■□□ 2.36
HLA-B-250ENST00000434333 WAPLQ7Z5K2 1190 aa29.77■■■□□ 2.36
HLA-B-250ENST00000434333 PLEKHH1Q9ULM0 1364 aa29.77■■■□□ 2.36
HLA-B-250ENST00000434333 SOS2Q07890 1332 aaPredicted RBP29.76■■■□□ 2.36
HLA-B-250ENST00000434333 YTHDC2Q9H6S0 1430 aaKnown RBP29.76■■■□□ 2.35
HLA-B-250ENST00000434333 ZNF772Q68DY9 489 aaPredicted RBP29.74■■■□□ 2.35
HLA-B-250ENST00000434333 C14orf93Q9H972 538 aaKnown RBP29.74■■■□□ 2.35
HLA-B-250ENST00000434333 CFAP70Q5T0N1 1121 aa29.69■■■□□ 2.34
HLA-B-250ENST00000434333 FMN2Q9NZ56 1722 aa29.68■■■□□ 2.34
HLA-B-250ENST00000434333 HRCP23327 699 aa29.67■■■□□ 2.34
HLA-B-250ENST00000434333 SIRT1Q96EB6 747 aa29.67■■■□□ 2.34
HLA-B-250ENST00000434333 AFF2P51816 1311 aa29.67■■■□□ 2.34
HLA-B-250ENST00000434333 ESCO1Q5FWF5 840 aa29.66■■■□□ 2.34
HLA-B-250ENST00000434333 PXDNQ92626 1479 aa29.66■■■□□ 2.34
HLA-B-250ENST00000434333 COL22A1Q8NFW1 1626 aaPredicted RBP29.65■■■□□ 2.34
HLA-B-250ENST00000434333 NPHP3Q7Z494 1330 aa29.64■■■□□ 2.34
HLA-B-250ENST00000434333 DHX57Q6P158 1386 aaKnown RBP29.63■■■□□ 2.33
HLA-B-250ENST00000434333 NUTM2FA1L443 756 aa29.62■■■□□ 2.33
HLA-B-250ENST00000434333 ADGRB1O14514 1584 aa29.61■■■□□ 2.33
HLA-B-250ENST00000434333 C8orf37Q96NL8 207 aa29.61■■■□□ 2.33
HLA-B-250ENST00000434333 FOXO3O43524 673 aa29.59■■■□□ 2.33
HLA-B-250ENST00000434333 DLC1Q96QB1 1528 aa29.59■■■□□ 2.33
HLA-B-250ENST00000434333 CDK12Q9NYV4 1490 aaPredicted RBP29.57■■■□□ 2.32
HLA-B-250ENST00000434333 ADAMTS2O95450 1211 aa29.57■■■□□ 2.32
HLA-B-250ENST00000434333 RXRBP28702 533 aa29.57■■■□□ 2.32
HLA-B-250ENST00000434333 KIF1AQ12756 1690 aa29.56■■■□□ 2.32
HLA-B-250ENST00000434333 XPCQ01831 940 aaPredicted RBP29.56■■■□□ 2.32
HLA-B-250ENST00000434333 PRAM1Q96QH2 718 aa29.55■■■□□ 2.32
HLA-B-250ENST00000434333 RGPD8O14715 1765 aaPredicted RBP29.54■■■□□ 2.32
HLA-B-250ENST00000434333 DCAF11Q8TEB1 546 aa29.52■■■□□ 2.32
HLA-B-250ENST00000434333 NGLY1Q96IV0 654 aa29.51■■■□□ 2.31
HLA-B-250ENST00000434333 ADGRB2O60241 1585 aa29.51■■■□□ 2.31
HLA-B-250ENST00000434333 SAFB2Q14151 953 aaKnown RBP eCLIP29.5■■■□□ 2.31
HLA-B-250ENST00000434333 KDM2AQ9Y2K7 1162 aa29.5■■■□□ 2.31
HLA-B-250ENST00000434333 QTRT2Q9H974 415 aaKnown RBP29.49■■■□□ 2.31
HLA-B-250ENST00000434333 USP32Q8NFA0 1604 aa29.48■■■□□ 2.31
HLA-B-250ENST00000434333 RGS12O14924 1447 aa29.47■■■□□ 2.31
HLA-B-250ENST00000434333 STAC3Q96MF2 364 aa29.47■■■□□ 2.31
HLA-B-250ENST00000434333 MARF1Q9Y4F3 1742 aaKnown RBP29.47■■■□□ 2.31
HLA-B-250ENST00000434333 RBM6P78332 1123 aaKnown RBP29.46■■■□□ 2.31
HLA-B-250ENST00000434333 FNBP4Q8N3X1 1017 aaPredicted RBP29.46■■■□□ 2.31
HLA-B-250ENST00000434333 SPATA31A3Q5VYP0 1347 aa29.45■■■□□ 2.31
HLA-B-250ENST00000434333 TRAK1Q9UPV9 953 aa29.45■■■□□ 2.31
HLA-B-250ENST00000434333 UPF1Q92900 1129 aaKnown RBP eCLIP29.44■■■□□ 2.3
HLA-B-250ENST00000434333 POGKQ9P215 609 aa29.44■■■□□ 2.3
HLA-B-250ENST00000434333 PHF8Q9UPP1 1060 aa29.44■■■□□ 2.3
HLA-B-250ENST00000434333 KRT28Q7Z3Y7 464 aa29.43■■■□□ 2.3
HLA-B-250ENST00000434333 USP21Q9UK80 565 aa29.43■■■□□ 2.3
HLA-B-250ENST00000434333 ANKARQ7Z5J8 1434 aa29.43■■■□□ 2.3
HLA-B-250ENST00000434333 ATRNO75882 1429 aa29.39■■■□□ 2.3
HLA-B-250ENST00000434333 TNS3Q68CZ2 1445 aa29.38■■■□□ 2.29
HLA-B-250ENST00000434333 BCL9LQ86UU0 1499 aa29.38■■■□□ 2.29
HLA-B-250ENST00000434333 ARHGEF28Q8N1W1 1705 aaKnown RBP29.38■■■□□ 2.29
HLA-B-250ENST00000434333 HIRIP3Q9BW71 556 aaPredicted RBP29.37■■■□□ 2.29
HLA-B-250ENST00000434333 TRPC5Q9UL62 973 aaPredicted RBP29.37■■■□□ 2.29
HLA-B-250ENST00000434333 MINK1Q8N4C8 1332 aaPredicted RBP29.36■■■□□ 2.29
HLA-B-250ENST00000434333 PRR36Q9H6K5 1346 aa29.35■■■□□ 2.29
HLA-B-250ENST00000434333 SBNO1A3KN83 1393 aa29.35■■■□□ 2.29
HLA-B-250ENST00000434333 TULP4Q9NRJ4 1543 aa29.35■■■□□ 2.29
HLA-B-250ENST00000434333 PMFBP1Q8TBY8 1022 aa29.33■■■□□ 2.29
HLA-B-250ENST00000434333 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.32■■■□□ 2.28
HLA-B-250ENST00000434333 PSME1Q06323 249 aa29.32■■■□□ 2.28
HLA-B-250ENST00000434333 ABCA3Q99758 1704 aa29.31■■■□□ 2.28
HLA-B-250ENST00000434333 TRPM3Q9HCF6 1732 aaPredicted RBP29.31■■■□□ 2.28
HLA-B-250ENST00000434333 KIAA1210Q9ULL0 1709 aa29.31■■■□□ 2.28
HLA-B-250ENST00000434333 SLIT2O94813 1529 aa29.31■■■□□ 2.28
HLA-B-250ENST00000434333 EIF3AQ14152 1382 aaKnown RBP29.3■■■□□ 2.28
HLA-B-250ENST00000434333 WASLO00401 505 aaPredicted RBP29.3■■■□□ 2.28
HLA-B-250ENST00000434333 CABLES1Q8TDN4 633 aa29.26■■■□□ 2.27
HLA-B-250ENST00000434333 ARHGEF10O15013 1369 aa29.26■■■□□ 2.27
HLA-B-250ENST00000434333 ALS2Q96Q42 1657 aa29.25■■■□□ 2.27
HLA-B-250ENST00000434333 ATP7BP35670 1465 aa29.24■■■□□ 2.27
HLA-B-250ENST00000434333 GLI3P10071 1580 aa29.22■■■□□ 2.27
HLA-B-250ENST00000434333 UNC5CLQ8IV45 518 aa29.22■■■□□ 2.27
HLA-B-250ENST00000434333 GJD4Q96KN9 370 aaPredicted RBP29.22■■■□□ 2.27
HLA-B-250ENST00000434333 NBPF1Q3BBV0 1214 aa29.21■■■□□ 2.27
HLA-B-250ENST00000434333 LMOD2Q6P5Q4 547 aa29.21■■■□□ 2.27
HLA-B-250ENST00000434333 PLCH1Q4KWH8 1693 aa29.21■■■□□ 2.27
HLA-B-250ENST00000434333 ITSN1Q15811 1721 aa29.2■■■□□ 2.27
HLA-B-250ENST00000434333 GPRASP1Q5JY77 1395 aa29.19■■■□□ 2.26
HLA-B-250ENST00000434333 RALGAPBQ86X10 1494 aa29.18■■■□□ 2.26
HLA-B-250ENST00000434333 ATAD2Q6PL18 1390 aa29.18■■■□□ 2.26
HLA-B-250ENST00000434333 NWD2Q9ULI1 1742 aa29.18■■■□□ 2.26
HLA-B-250ENST00000434333 PLEKHG5O94827 1062 aa29.18■■■□□ 2.26
HLA-B-250ENST00000434333 HAP1P54257 671 aaPredicted RBP29.18■■■□□ 2.26
HLA-B-250ENST00000434333 CRYBG1Q9Y4K1 1723 aa29.17■■■□□ 2.26
HLA-B-250ENST00000434333 TOPAZ1Q8N9V7 1692 aa29.16■■■□□ 2.26
HLA-B-250ENST00000434333 NUDT16Q96DE0 195 aaKnown RBP29.16■■■□□ 2.26
HLA-B-250ENST00000434333 EP400Q96L91 3159 aa29.15■■■□□ 2.26
HLA-B-250ENST00000434333 NGDNQ8NEJ9 315 aaKnown RBP29.14■■■□□ 2.26
HLA-B-250ENST00000434333 CDK19Q9BWU1 502 aa29.13■■■□□ 2.25
HLA-B-250ENST00000434333 NRAPQ86VF7 1730 aa29.11■■■□□ 2.25
HLA-B-250ENST00000434333 FAM83GA6ND36 823 aa29.1■■■□□ 2.25
HLA-B-250ENST00000434333 L3MBTL2Q969R5 705 aa29.1■■■□□ 2.25
HLA-B-250ENST00000434333 VPS72Q15906 364 aa29.09■■■□□ 2.25
HLA-B-250ENST00000434333 SIN3AQ96ST3 1273 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms