RNA–Protein interactions for RNA: ENST00000434172.2

CKS1BP5-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 5, humanhuman

BASIC

Gene CKS1BP5, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP5-201ENST00000434172 NOVA2Q9UNW9 492 aaKnown RBP5.82□□□□□ -1.48
CKS1BP5-201ENST00000434172 PCDHB15Q9Y5E8 787 aa5.82□□□□□ -1.48
CKS1BP5-201ENST00000434172 PCDHGA10Q9Y5H3 936 aa5.82□□□□□ -1.48
CKS1BP5-201ENST00000434172 ANKRD33BA6NCL7 494 aa5.81□□□□□ -1.48
CKS1BP5-201ENST00000434172 SLC34A2O95436 690 aa5.81□□□□□ -1.48
CKS1BP5-201ENST00000434172 FXR2P51116 673 aaKnown RBP eCLIP5.81□□□□□ -1.48
CKS1BP5-201ENST00000434172 NAALADL2Q58DX5 795 aa5.81□□□□□ -1.48
CKS1BP5-201ENST00000434172 CABLES1Q8TDN4 633 aa5.81□□□□□ -1.48
CKS1BP5-201ENST00000434172 CLP1Q92989 425 aaKnown RBP5.81□□□□□ -1.48
CKS1BP5-201ENST00000434172 JPH4Q96JJ6 628 aa5.81□□□□□ -1.48
CKS1BP5-201ENST00000434172 HMX1Q9NP08 348 aaPredicted RBP5.81□□□□□ -1.48
CKS1BP5-201ENST00000434172 TRIM35Q9UPQ4 493 aa5.81□□□□□ -1.48
CKS1BP5-201ENST00000434172 FAM196BA6NMK8 535 aa5.8□□□□□ -1.48
CKS1BP5-201ENST00000434172 CD44P16070 742 aaKnown RBP5.8□□□□□ -1.48
CKS1BP5-201ENST00000434172 PLEKHM2Q8IWE5 1019 aa5.8□□□□□ -1.48
CKS1BP5-201ENST00000434172 ZC3H4Q9UPT8 1303 aaKnown RBP5.79□□□□□ -1.48
CKS1BP5-201ENST00000434172 ANKRD62A6NC57 917 aa5.79□□□□□ -1.48
CKS1BP5-201ENST00000434172 RECKO95980 971 aa5.79□□□□□ -1.48
CKS1BP5-201ENST00000434172 NDUFV2P19404 249 aa5.79□□□□□ -1.48
CKS1BP5-201ENST00000434172 COL19A1Q14993 1142 aa5.79□□□□□ -1.48
CKS1BP5-201ENST00000434172 CWC22Q9HCG8 908 aaKnown RBP5.79□□□□□ -1.48
CKS1BP5-201ENST00000434172 BIN2Q9UBW5 565 aaPredicted RBP5.79□□□□□ -1.48
CKS1BP5-201ENST00000434172 RCCD1A6NED2 376 aa5.78□□□□□ -1.48
CKS1BP5-201ENST00000434172 FBXO33Q7Z6M2 555 aa5.78□□□□□ -1.48
CKS1BP5-201ENST00000434172 C1orf216Q8TAB5 229 aa5.78□□□□□ -1.48
CKS1BP5-201ENST00000434172 HIRIP3Q9BW71 556 aaPredicted RBP5.78□□□□□ -1.48
CKS1BP5-201ENST00000434172 OCEL1Q9H607 264 aa5.78□□□□□ -1.48
CKS1BP5-201ENST00000434172 BMP2KQ9NSY1 1161 aaPredicted RBP5.78□□□□□ -1.48
CKS1BP5-201ENST00000434172 EGFL7Q9UHF1 273 aa5.78□□□□□ -1.48
CKS1BP5-201ENST00000434172 USP17L3A6NCW0 530 aa5.77□□□□□ -1.49
CKS1BP5-201ENST00000434172 USP17L4A6NCW7 530 aa5.77□□□□□ -1.49
CKS1BP5-201ENST00000434172 KDM4AO75164 1064 aa5.77□□□□□ -1.49
CKS1BP5-201ENST00000434172 BRD2P25440 801 aaKnown RBP5.77□□□□□ -1.49
CKS1BP5-201ENST00000434172 PRSS12P56730 875 aa5.77□□□□□ -1.49
CKS1BP5-201ENST00000434172 CTDSPL2Q05D32 466 aa5.77□□□□□ -1.49
CKS1BP5-201ENST00000434172 SWI5Q1ZZU3 235 aa5.77□□□□□ -1.49
CKS1BP5-201ENST00000434172 USP17L2Q6R6M4 530 aa5.77□□□□□ -1.49
CKS1BP5-201ENST00000434172 USP17L1Q7RTZ2 530 aa5.77□□□□□ -1.49
CKS1BP5-201ENST00000434172 NOP9Q86U38 636 aaKnown RBP5.77□□□□□ -1.49
CKS1BP5-201ENST00000434172 PPP1R1BQ9UD71 204 aaPredicted RBP5.77□□□□□ -1.49
CKS1BP5-201ENST00000434172 DDX11L8A8MPP1 907 aa5.76□□□□□ -1.49
CKS1BP5-201ENST00000434172 USP17L15C9J2P7 530 aa5.76□□□□□ -1.49
CKS1BP5-201ENST00000434172 USP17L10C9JJH3 530 aa5.76□□□□□ -1.49
CKS1BP5-201ENST00000434172 USP17L13C9JLJ4 530 aa5.76□□□□□ -1.49
CKS1BP5-201ENST00000434172 USP17L12C9JPN9 530 aa5.76□□□□□ -1.49
CKS1BP5-201ENST00000434172 USP17L11C9JVI0 530 aa5.76□□□□□ -1.49
CKS1BP5-201ENST00000434172 USP17L21D6R901 530 aa5.76□□□□□ -1.49
CKS1BP5-201ENST00000434172 USP17L18D6R9N7 530 aa5.76□□□□□ -1.49
CKS1BP5-201ENST00000434172 USP17L22D6RA61 530 aa5.76□□□□□ -1.49
CKS1BP5-201ENST00000434172 USP17L17D6RBQ6 530 aa5.76□□□□□ -1.49
CKS1BP5-201ENST00000434172 USP17L19D6RCP7 530 aa5.76□□□□□ -1.49
CKS1BP5-201ENST00000434172 USP17L20D6RJB6 530 aa5.76□□□□□ -1.49
CKS1BP5-201ENST00000434172 LZTS3O60299 673 aaPredicted RBP5.76□□□□□ -1.49
CKS1BP5-201ENST00000434172 FDX1P10109 184 aa5.76□□□□□ -1.49
CKS1BP5-201ENST00000434172 ATP2B4P23634 1241 aa5.76□□□□□ -1.49
CKS1BP5-201ENST00000434172 SERPINB4P48594 390 aa5.76□□□□□ -1.49
CKS1BP5-201ENST00000434172 IRX5P78411 483 aaPredicted RBP5.76□□□□□ -1.49
CKS1BP5-201ENST00000434172 USP17L24Q0WX57 530 aa5.76□□□□□ -1.49
CKS1BP5-201ENST00000434172 C6orf132Q5T0Z8 1188 aa5.76□□□□□ -1.49
CKS1BP5-201ENST00000434172 IER5LQ5T953 404 aa5.76□□□□□ -1.49
CKS1BP5-201ENST00000434172 RNF135Q8IUD6 432 aa5.76□□□□□ -1.49
CKS1BP5-201ENST00000434172 SLF2Q8IX21 1173 aa5.76□□□□□ -1.49
CKS1BP5-201ENST00000434172 CDCA7Q9BWT1 371 aaPredicted RBP5.76□□□□□ -1.49
CKS1BP5-201ENST00000434172 HOXA2O43364 376 aa5.75□□□□□ -1.49
CKS1BP5-201ENST00000434172 C7P10643 843 aa5.75□□□□□ -1.49
CKS1BP5-201ENST00000434172 DNAJB2P25686 324 aa5.75□□□□□ -1.49
CKS1BP5-201ENST00000434172 ERCC5P28715 1186 aaPredicted RBP5.75□□□□□ -1.49
CKS1BP5-201ENST00000434172 FAM69CQ0P6D2 419 aa5.75□□□□□ -1.49
CKS1BP5-201ENST00000434172 MTMR2Q13614 643 aa5.75□□□□□ -1.49
CKS1BP5-201ENST00000434172 TMEM92Q6UXU6 159 aa5.75□□□□□ -1.49
CKS1BP5-201ENST00000434172 FAM200AQ8TCP9 573 aa5.75□□□□□ -1.49
CKS1BP5-201ENST00000434172 USP17L5A8MUK1 530 aa5.74□□□□□ -1.49
CKS1BP5-201ENST00000434172 ITGAEP38570 1179 aa5.74□□□□□ -1.49
CKS1BP5-201ENST00000434172 LARP1Q6PKG0 1096 aaKnown RBP5.74□□□□□ -1.49
CKS1BP5-201ENST00000434172 ZSCAN29Q8IWY8 852 aaPredicted RBP5.74□□□□□ -1.49
CKS1BP5-201ENST00000434172 LRRN4Q8WUT4 740 aa5.74□□□□□ -1.49
CKS1BP5-201ENST00000434172 CDCA7LQ96GN5 454 aa5.74□□□□□ -1.49
CKS1BP5-201ENST00000434172 ASB16Q96NS5 453 aa5.74□□□□□ -1.49
CKS1BP5-201ENST00000434172 EYA1Q99502 592 aa5.74□□□□□ -1.49
CKS1BP5-201ENST00000434172 ARID4BQ4LE39 1312 aaPredicted RBP5.74□□□□□ -1.49
CKS1BP5-201ENST00000434172 ATP5J2-PTCD1G3V325 749 aa5.73□□□□□ -1.49
CKS1BP5-201ENST00000434172 SCAMP3O14828 347 aaKnown RBP5.73□□□□□ -1.49
CKS1BP5-201ENST00000434172 FOSBP53539 338 aa5.73□□□□□ -1.49
CKS1BP5-201ENST00000434172 NR1H3Q13133 447 aa5.73□□□□□ -1.49
CKS1BP5-201ENST00000434172 TSNAXIP1Q2TAA8 658 aa5.73□□□□□ -1.49
CKS1BP5-201ENST00000434172 DPH6Q7L8W6 267 aa5.73□□□□□ -1.49
CKS1BP5-201ENST00000434172 ZNF592Q92610 1267 aa5.73□□□□□ -1.49
CKS1BP5-201ENST00000434172 TMEM134Q9H6X4 195 aa5.73□□□□□ -1.49
CKS1BP5-201ENST00000434172 CUEDC1Q9NWM3 386 aaPredicted RBP5.73□□□□□ -1.49
CKS1BP5-201ENST00000434172 TMA7Q9Y2S6 64 aaKnown RBP5.73□□□□□ -1.49
CKS1BP5-201ENST00000434172 PTK7Q13308 1070 aa5.72□□□□□ -1.49
CKS1BP5-201ENST00000434172 GIMAP6Q6P9H5 292 aa5.72□□□□□ -1.49
CKS1BP5-201ENST00000434172 ARMC5Q96C12 935 aa5.72□□□□□ -1.49
CKS1BP5-201ENST00000434172 SLAIN2Q9P270 581 aa5.72□□□□□ -1.49
CKS1BP5-201ENST00000434172 CRTC2Q53ET0 693 aaPredicted RBP5.71□□□□□ -1.5
CKS1BP5-201ENST00000434172 ANKMY2Q8IV38 441 aa5.71□□□□□ -1.5
CKS1BP5-201ENST00000434172 DHX37Q8IY37 1157 aaKnown RBP5.71□□□□□ -1.5
CKS1BP5-201ENST00000434172 RDH13Q8NBN7 331 aa5.71□□□□□ -1.5
CKS1BP5-201ENST00000434172 TSC1Q92574 1164 aa5.71□□□□□ -1.5
CKS1BP5-201ENST00000434172 ZDHHC16Q969W1 377 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms